RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 SMURF1Q9HCE7 757 aa9.36□□□□□ -0.91
PTPRA-202ENST00000318266 PRDM5Q9NQX1 630 aaPredicted RBP9.36□□□□□ -0.91
PTPRA-202ENST00000318266 TMEM248Q9NWD8 314 aa9.36□□□□□ -0.91
PTPRA-202ENST00000318266 CCDC59Q9P031 241 aaKnown RBP9.36□□□□□ -0.91
PTPRA-202ENST00000318266 DUSP12Q9UNI6 340 aa9.36□□□□□ -0.91
PTPRA-202ENST00000318266 ARIH1Q9Y4X5 557 aaPredicted RBP9.36□□□□□ -0.91
PTPRA-202ENST00000318266 WWP2O00308 870 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 TSC22D2O75157 780 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 ODC1P11926 461 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 CBLP22681 906 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 WEE1P30291 646 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 DDOSTP39656 456 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 MAGEA11P43364 429 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 IL10RBQ08334 325 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 SLC39A12Q504Y0 691 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 C11orf74Q86VG3 221 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 GLCCI1Q86VQ1 547 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 CLECL1Q8IZS7 167 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 TEX26Q8N6G2 289 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 WDR36Q8NI36 951 aaKnown RBP9.35□□□□□ -0.91
PTPRA-202ENST00000318266 GTPBP3Q969Y2 492 aaKnown RBP9.35□□□□□ -0.91
PTPRA-202ENST00000318266 TMCO6Q96DC7 493 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 HRASLS5Q96KN8 279 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 CCM2Q9BSQ5 444 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 ZNF717Q9BY31 904 aaPredicted RBP9.35□□□□□ -0.91
PTPRA-202ENST00000318266 ACPTQ9BZG2 426 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 NXF2Q9GZY0 626 aaKnown RBP9.35□□□□□ -0.91
PTPRA-202ENST00000318266 KCNH6Q9H252 994 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 ZNF408Q9H9D4 720 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 TNPO3Q9Y5L0 923 aaKnown RBP9.35□□□□□ -0.91
PTPRA-202ENST00000318266 MN1Q10571 1320 aaPredicted RBP9.35□□□□□ -0.91
PTPRA-202ENST00000318266 SMIM35A0A1B0GVV1 85 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 A0A1W2PQ72 361 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 MANBAO00462 879 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 SCAMP3O14828 347 aaKnown RBP9.35□□□□□ -0.91
PTPRA-202ENST00000318266 WNT9AO14904 365 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 AKR7A2O43488 359 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 WDR47O94967 919 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 C9P02748 559 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 YES1P07947 543 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 IL7P13232 177 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 RPS19P39019 145 aaKnown RBP9.35□□□□□ -0.91
PTPRA-202ENST00000318266 TTPAP49638 278 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 BEX3Q00994 111 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 PCBP2Q15366 365 aaKnown RBP eCLIP9.35□□□□□ -0.912e-6■■■□□ 19.1
PTPRA-202ENST00000318266 VMACQ2NL98 169 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 PARP15Q460N3 678 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 SDE2Q6IQ49 451 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 TMPRSS11AQ6ZMR5 421 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 ZSWIM9Q86XI8 627 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 SIMC1Q8NDZ2 872 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 ST13P5Q8NFI4 369 aaPredicted RBP9.35□□□□□ -0.91
PTPRA-202ENST00000318266 B3GNT7Q8NFL0 401 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 LKAAEAR1Q8TD35 194 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 SELENOMQ8WWX9 145 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 SLC7A6Q92536 515 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 MAP6Q96JE9 813 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 NIPSNAP1Q9BPW8 284 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 ARPC5LQ9BPX5 153 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 ASPNQ9BXN1 380 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 CLPBQ9H078 707 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 DYRK4Q9NR20 520 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 TEKT2Q9UIF3 430 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 POLR2AP24928 1970 aaKnown RBP9.35□□□□□ -0.91
PTPRA-202ENST00000318266 CCDC182A6NF36 153 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 A8MX80 341 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 FPGTO14772 594 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 GPX5O75715 221 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 PDYNP01213 254 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 ESR1P03372 595 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 LPOP22079 712 aaPredicted RBP9.35□□□□□ -0.91
PTPRA-202ENST00000318266 CLCN7P51798 805 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 TWF1Q12792 350 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 MAD2L1Q13257 205 aaPredicted RBP9.35□□□□□ -0.91
PTPRA-202ENST00000318266 GPAT3Q53EU6 434 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 C10orf120Q5SQS8 335 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 NADSYN1Q6IA69 706 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 FAM171BQ6P995 826 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 FAM131AQ6UXB0 335 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 ADAMTSL2Q86TH1 951 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 OR9Q2Q8NGE9 314 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 SKA2Q8WVK7 121 aaPredicted RBP9.35□□□□□ -0.91
PTPRA-202ENST00000318266 KCNJ9Q92806 393 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 COL21A1Q96P44 957 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 MCCC1Q96RQ3 725 aaPredicted RBP9.35□□□□□ -0.91
PTPRA-202ENST00000318266 ACBD6Q9BR61 282 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 TRIM62Q9BVG3 475 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 FAM105AQ9NUU6 356 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 CFL2Q9Y281 166 aa9.35□□□□□ -0.91
PTPRA-202ENST00000318266 FAM25AB3EWG3 89 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 FAM25CB3EWG5 89 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 FAM25GB3EWG6 89 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 SLC28A1O00337 649 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 KCNK5O95279 499 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 CCNYL3P0C7X3 344 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 CTPS1P17812 591 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 PTPN6P29350 595 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 HTR7P34969 479 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 CDH12P55289 794 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 FAM151BQ6UXP7 276 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms