RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.32□□□□□ -1.24
CDHR3-201ENST00000317716 LGALS3BPQ08380 585 aa7.32□□□□□ -1.24
CDHR3-201ENST00000317716 RPA4Q13156 261 aa7.32□□□□□ -1.24
CDHR3-201ENST00000317716 ALFQ53S48 1182 aa7.32□□□□□ -1.24
CDHR3-201ENST00000317716 CLEC12AQ5QGZ9 265 aa7.32□□□□□ -1.24
CDHR3-201ENST00000317716 LYSMD2Q8IV50 215 aa7.32□□□□□ -1.24
CDHR3-201ENST00000317716 OR7G1Q8NGA0 311 aa7.32□□□□□ -1.24
CDHR3-201ENST00000317716 ZNF671Q8TAW3 534 aa7.32□□□□□ -1.24
CDHR3-201ENST00000317716 FEVQ99581 238 aa7.32□□□□□ -1.24
CDHR3-201ENST00000317716 INPP5KQ9BT40 448 aa7.32□□□□□ -1.24
CDHR3-201ENST00000317716 DPCDQ9BVM2 203 aaPredicted RBP7.32□□□□□ -1.24
CDHR3-201ENST00000317716 C1QTNF1Q9BXJ1 281 aa7.32□□□□□ -1.24
CDHR3-201ENST00000317716 GPN2Q9H9Y4 310 aaPredicted RBP7.32□□□□□ -1.24
CDHR3-201ENST00000317716 NANSQ9NR45 359 aa7.32□□□□□ -1.24
CDHR3-201ENST00000317716 A0A1W2PQ09 198 aa7.32□□□□□ -1.24
CDHR3-201ENST00000317716 MAGEB17A8MXT2 336 aa7.32□□□□□ -1.24
CDHR3-201ENST00000317716 SLC28A1O00337 649 aa7.32□□□□□ -1.24
CDHR3-201ENST00000317716 C1QAP02745 245 aa7.32□□□□□ -1.24
CDHR3-201ENST00000317716 ALPIP09923 528 aa7.32□□□□□ -1.24
CDHR3-201ENST00000317716 SDHBP21912 280 aa7.32□□□□□ -1.24
CDHR3-201ENST00000317716 ERVPABLB-1P60509 514 aa7.32□□□□□ -1.24
CDHR3-201ENST00000317716 FGFBP1Q14512 234 aa7.32□□□□□ -1.24
CDHR3-201ENST00000317716 LRIT3Q3SXY7 679 aa7.32□□□□□ -1.24
CDHR3-201ENST00000317716 SMUG1Q53HV7 270 aa7.32□□□□□ -1.24
CDHR3-201ENST00000317716 ATXN7L2Q5T6C5 722 aaPredicted RBP7.32□□□□□ -1.24
CDHR3-201ENST00000317716 C22orf42Q6IC83 251 aa7.32□□□□□ -1.24
CDHR3-201ENST00000317716 GDF6Q6KF10 455 aaPredicted RBP7.32□□□□□ -1.24
CDHR3-201ENST00000317716 LETMD1Q6P1Q0 360 aa7.32□□□□□ -1.24
CDHR3-201ENST00000317716 TNFAIP8L2Q6P589 184 aaPredicted RBP7.32□□□□□ -1.24
CDHR3-201ENST00000317716 TRIM40Q6P9F5 258 aa7.32□□□□□ -1.24
CDHR3-201ENST00000317716 GOLGA7Q7Z5G4 137 aa7.32□□□□□ -1.24
CDHR3-201ENST00000317716 COLGALT2Q8IYK4 626 aa7.32□□□□□ -1.24
CDHR3-201ENST00000317716 PPTC7Q8NI37 304 aa7.32□□□□□ -1.24
CDHR3-201ENST00000317716 GPR151Q8TDV0 419 aa7.32□□□□□ -1.24
CDHR3-201ENST00000317716 AKAP1Q92667 903 aaKnown RBP eCLIP7.32□□□□□ -1.24
CDHR3-201ENST00000317716 OTUB1Q96FW1 271 aaPredicted RBP7.32□□□□□ -1.24
CDHR3-201ENST00000317716 AARSD1Q9BTE6 412 aaKnown RBP7.32□□□□□ -1.24
CDHR3-201ENST00000317716 NECTIN3Q9NQS3 549 aa7.32□□□□□ -1.24
CDHR3-201ENST00000317716 AGO1Q9UL18 857 aaKnown RBP7.32□□□□□ -1.24
CDHR3-201ENST00000317716 ABCG2Q9UNQ0 655 aa7.32□□□□□ -1.24
CDHR3-201ENST00000317716 CLCA2Q9UQC9 943 aa7.32□□□□□ -1.24
CDHR3-201ENST00000317716 WDR90Q96KV7 1748 aa7.31□□□□□ -1.24
CDHR3-201ENST00000317716 COL11A1P12107 1806 aaPredicted RBP7.31□□□□□ -1.24
CDHR3-201ENST00000317716 MEIOCA2RUB1 952 aa7.31□□□□□ -1.24
CDHR3-201ENST00000317716 CPSF4LA6NMK7 179 aaKnown RBP7.31□□□□□ -1.24
CDHR3-201ENST00000317716 PLD2O14939 933 aa7.31□□□□□ -1.24
CDHR3-201ENST00000317716 NAT1P18440 290 aa7.31□□□□□ -1.24
CDHR3-201ENST00000317716 EPHA2P29317 976 aa7.31□□□□□ -1.24
CDHR3-201ENST00000317716 SLC11A2P49281 568 aa7.31□□□□□ -1.24
CDHR3-201ENST00000317716 RPS24P62847 133 aaKnown RBP7.31□□□□□ -1.24
CDHR3-201ENST00000317716 EMX2Q04743 252 aa7.31□□□□□ -1.24
CDHR3-201ENST00000317716 NPRL3Q12980 569 aa7.31□□□□□ -1.24
CDHR3-201ENST00000317716 POU4F3Q15319 338 aa7.31□□□□□ -1.24
CDHR3-201ENST00000317716 TARBP2Q15633 366 aaKnown RBP7.31□□□□□ -1.24
CDHR3-201ENST00000317716 ZNF181Q2M3W8 571 aa7.31□□□□□ -1.24
CDHR3-201ENST00000317716 USP45Q70EL2 814 aa7.31□□□□□ -1.24
CDHR3-201ENST00000317716 SHFQ7M4L6 423 aa7.31□□□□□ -1.24
CDHR3-201ENST00000317716 RNF175Q8N4F7 328 aa7.31□□□□□ -1.24
CDHR3-201ENST00000317716 GLB1L3Q8NCI6 653 aaPredicted RBP7.31□□□□□ -1.24
CDHR3-201ENST00000317716 ADAMTS16Q8TE57 1224 aa7.31□□□□□ -1.24
CDHR3-201ENST00000317716 HHIPL1Q96JK4 782 aa7.31□□□□□ -1.24
CDHR3-201ENST00000317716 CTRCQ99895 268 aa7.31□□□□□ -1.24
CDHR3-201ENST00000317716 GAL3ST1Q99999 423 aa7.31□□□□□ -1.24
CDHR3-201ENST00000317716 TMED9Q9BVK6 235 aa7.31□□□□□ -1.24
CDHR3-201ENST00000317716 TEX12Q9BXU0 123 aa7.31□□□□□ -1.24
CDHR3-201ENST00000317716 TFB2MQ9H5Q4 396 aaKnown RBP7.31□□□□□ -1.24
CDHR3-201ENST00000317716 CRTAC1Q9NQ79 661 aa7.31□□□□□ -1.24
CDHR3-201ENST00000317716 ZIM2Q9NZV7 527 aa7.31□□□□□ -1.24
CDHR3-201ENST00000317716 PPIEQ9UNP9 301 aaKnown RBP7.31□□□□□ -1.24
CDHR3-201ENST00000317716 RAI2Q9Y5P3 530 aa7.31□□□□□ -1.24
CDHR3-201ENST00000317716 NRCAMQ92823 1304 aa7.31□□□□□ -1.24
CDHR3-201ENST00000317716 DOCK5Q9H7D0 1870 aa7.31□□□□□ -1.24
CDHR3-201ENST00000317716 WWP2O00308 870 aa7.31□□□□□ -1.24
CDHR3-201ENST00000317716 NDST3O95803 873 aa7.31□□□□□ -1.24
CDHR3-201ENST00000317716 ENDOUP21128 410 aaKnown RBP7.31□□□□□ -1.24
CDHR3-201ENST00000317716 FPR1P21462 350 aa7.31□□□□□ -1.24
CDHR3-201ENST00000317716 DGKAP23743 735 aa7.31□□□□□ -1.24
CDHR3-201ENST00000317716 HRH2P25021 359 aa7.31□□□□□ -1.24
CDHR3-201ENST00000317716 ARNTP27540 789 aa7.31□□□□□ -1.24
CDHR3-201ENST00000317716 RORCP51449 518 aa7.31□□□□□ -1.24
CDHR3-201ENST00000317716 KRT33BQ14525 404 aa7.31□□□□□ -1.24
CDHR3-201ENST00000317716 PSME4Q14997 1843 aa7.31□□□□□ -1.24
CDHR3-201ENST00000317716 HKDC1Q2TB90 917 aa7.31□□□□□ -1.24
CDHR3-201ENST00000317716 SPRED1Q7Z699 444 aa7.31□□□□□ -1.24
CDHR3-201ENST00000317716 MEX3DQ86XN8 651 aaKnown RBP7.31□□□□□ -1.24
CDHR3-201ENST00000317716 REM2Q8IYK8 340 aaPredicted RBP7.31□□□□□ -1.24
CDHR3-201ENST00000317716 RTL3Q8N8U3 475 aaKnown RBP7.31□□□□□ -1.24
CDHR3-201ENST00000317716 OR4K1Q8NGD4 311 aa7.31□□□□□ -1.24
CDHR3-201ENST00000317716 MUL1Q969V5 352 aa7.31□□□□□ -1.24
CDHR3-201ENST00000317716 EFHD2Q96C19 240 aaPredicted RBP7.31□□□□□ -1.24
CDHR3-201ENST00000317716 CCM2Q9BSQ5 444 aa7.31□□□□□ -1.24
CDHR3-201ENST00000317716 TTTY10Q9BZA0 68 aa7.31□□□□□ -1.24
CDHR3-201ENST00000317716 SMURF1Q9HCE7 757 aa7.31□□□□□ -1.24
CDHR3-201ENST00000317716 CD84Q9UIB8 345 aa7.31□□□□□ -1.24
CDHR3-201ENST00000317716 GTF2A1LQ9UNN4 478 aa7.31□□□□□ -1.24
CDHR3-201ENST00000317716 ZNFX1Q9P2E3 1918 aaKnown RBP7.31□□□□□ -1.24
CDHR3-201ENST00000317716 IQCMA0A1B0GVH7 501 aa7.31□□□□□ -1.24
CDHR3-201ENST00000317716 AREL1O15033 823 aa7.31□□□□□ -1.24
CDHR3-201ENST00000317716 EEDO75530 441 aaKnown RBP7.31□□□□□ -1.24
CDHR3-201ENST00000317716 PRAMEF1O95521 474 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms