RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 PCDHGA7Q9Y5G6 932 aa7.53□□□□□ -1.2
CDC42-201ENST00000315554 PCDHGA3Q9Y5H0 932 aa7.53□□□□□ -1.2
CDC42-201ENST00000315554 SYCE1LA8MT33 242 aa7.52□□□□□ -1.21
CDC42-201ENST00000315554 TARM1B6A8C7 271 aa7.52□□□□□ -1.21
CDC42-201ENST00000315554 H0YGG7 62 aa7.52□□□□□ -1.21
CDC42-201ENST00000315554 MAP2K7O14733 419 aa7.52□□□□□ -1.21
CDC42-201ENST00000315554 P2RX6O15547 441 aa7.52□□□□□ -1.21
CDC42-201ENST00000315554 ZNF749O43361 778 aa7.52□□□□□ -1.21
CDC42-201ENST00000315554 RRP9O43818 475 aaKnown RBP7.52□□□□□ -1.21
CDC42-201ENST00000315554 LCMT2O60294 686 aaKnown RBP7.52□□□□□ -1.21
CDC42-201ENST00000315554 RAD1O60671 282 aa7.52□□□□□ -1.21
CDC42-201ENST00000315554 SPAG7O75391 227 aa7.52□□□□□ -1.21
CDC42-201ENST00000315554 STK16O75716 305 aa7.52□□□□□ -1.21
CDC42-201ENST00000315554 FKBP9O95302 570 aa7.52□□□□□ -1.21
CDC42-201ENST00000315554 TUBBP07437 444 aa7.52□□□□□ -1.21
CDC42-201ENST00000315554 RBP1P09455 135 aa7.52□□□□□ -1.21
CDC42-201ENST00000315554 COL6A2P12110 1019 aa7.52□□□□□ -1.21
CDC42-201ENST00000315554 CREB1P16220 341 aa7.52□□□□□ -1.21
CDC42-201ENST00000315554 CCND1P24385 295 aa7.52□□□□□ -1.21
CDC42-201ENST00000315554 EIF2S3P41091 472 aaKnown RBP7.52□□□□□ -1.21
CDC42-201ENST00000315554 BCL6P41182 706 aa7.52□□□□□ -1.21
CDC42-201ENST00000315554 HNMTP50135 292 aa7.52□□□□□ -1.21
CDC42-201ENST00000315554 PCBP4P57723 403 aaKnown RBP7.52□□□□□ -1.21
CDC42-201ENST00000315554 ERVPABLB-1P60509 514 aa7.52□□□□□ -1.21
CDC42-201ENST00000315554 ARF3P61204 181 aaPredicted RBP7.52□□□□□ -1.21
CDC42-201ENST00000315554 SNRPNP63162 240 aaKnown RBP7.52□□□□□ -1.21
CDC42-201ENST00000315554 IL11RAQ14626 422 aa7.52□□□□□ -1.21
CDC42-201ENST00000315554 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.52□□□□□ -1.21
CDC42-201ENST00000315554 WASHC2DQ5SRD0 308 aa7.52□□□□□ -1.21
CDC42-201ENST00000315554 BEND6Q5SZJ8 279 aaPredicted RBP7.52□□□□□ -1.21
CDC42-201ENST00000315554 CEP85LQ5SZL2 805 aa7.52□□□□□ -1.21
CDC42-201ENST00000315554 FAM199XQ6PEV8 388 aaPredicted RBP7.52□□□□□ -1.21
CDC42-201ENST00000315554 IGF2-ASQ6U949 168 aa7.52□□□□□ -1.21
CDC42-201ENST00000315554 RNF44Q7L0R7 432 aa7.52□□□□□ -1.21
CDC42-201ENST00000315554 CCDC91Q7Z6B0 441 aa7.52□□□□□ -1.21
CDC42-201ENST00000315554 PROSER1Q86XN7 944 aa7.52□□□□□ -1.21
CDC42-201ENST00000315554 SRRM1Q8IYB3 904 aaKnown RBP7.52□□□□□ -1.21
CDC42-201ENST00000315554 GPR135Q8IZ08 494 aa7.52□□□□□ -1.21
CDC42-201ENST00000315554 TCAIMQ8N3R3 496 aa7.52□□□□□ -1.21
CDC42-201ENST00000315554 TEX9Q8N6V9 391 aa7.52□□□□□ -1.21
CDC42-201ENST00000315554 SLC38A9Q8NBW4 561 aa7.52□□□□□ -1.21
CDC42-201ENST00000315554 SVIPQ8NHG7 77 aa7.52□□□□□ -1.21
CDC42-201ENST00000315554 RHEBL1Q8TAI7 183 aa7.52□□□□□ -1.21
CDC42-201ENST00000315554 KCNE4Q8WWG9 221 aa7.52□□□□□ -1.21
CDC42-201ENST00000315554 CLIP3Q96DZ5 547 aa7.52□□□□□ -1.21
CDC42-201ENST00000315554 MOCOSQ96EN8 888 aa7.52□□□□□ -1.21
CDC42-201ENST00000315554 CABS1Q96KC9 395 aa7.52□□□□□ -1.21
CDC42-201ENST00000315554 ZFYVE21Q9BQ24 234 aa7.52□□□□□ -1.21
CDC42-201ENST00000315554 HAUS8Q9BT25 410 aa7.52□□□□□ -1.21
CDC42-201ENST00000315554 CD244Q9BZW8 370 aa7.52□□□□□ -1.21
CDC42-201ENST00000315554 PCBD2Q9H0N5 130 aa7.52□□□□□ -1.21
CDC42-201ENST00000315554 PPCSQ9HAB8 311 aa7.52□□□□□ -1.21
CDC42-201ENST00000315554 TMEM184CQ9NVA4 438 aa7.52□□□□□ -1.21
CDC42-201ENST00000315554 DNAJC11Q9NVH1 559 aa7.52□□□□□ -1.21
CDC42-201ENST00000315554 DHCR7Q9UBM7 475 aaKnown RBP7.52□□□□□ -1.21
CDC42-201ENST00000315554 SERTAD3Q9UJW9 196 aa7.52□□□□□ -1.21
CDC42-201ENST00000315554 PILRAQ9UKJ1 303 aa7.52□□□□□ -1.21
CDC42-201ENST00000315554 EMCNQ9ULC0 261 aa7.52□□□□□ -1.21
CDC42-201ENST00000315554 ZMIZ1Q9ULJ6 1067 aa7.52□□□□□ -1.21
CDC42-201ENST00000315554 APC2O95996 2303 aa7.52□□□□□ -1.21
CDC42-201ENST00000315554 ACACBO00763 2458 aa7.51□□□□□ -1.21
CDC42-201ENST00000315554 CCDC151A5D8V7 595 aa7.51□□□□□ -1.21
CDC42-201ENST00000315554 H3BMH7 237 aa7.51□□□□□ -1.21
CDC42-201ENST00000315554 STMND1H3BQB6 276 aa7.51□□□□□ -1.21
CDC42-201ENST00000315554 COPEO14579 308 aa7.51□□□□□ -1.21
CDC42-201ENST00000315554 ZSCAN9O15535 394 aaPredicted RBP7.51□□□□□ -1.21
CDC42-201ENST00000315554 KLK10O43240 276 aa7.51□□□□□ -1.21
CDC42-201ENST00000315554 CTIFO43310 598 aaKnown RBP7.51□□□□□ -1.21
CDC42-201ENST00000315554 OR1F1O43749 312 aa7.51□□□□□ -1.21
CDC42-201ENST00000315554 PRAMEF4O60810 478 aa7.51□□□□□ -1.21
CDC42-201ENST00000315554 SMIM24O75264 130 aa7.51□□□□□ -1.21
CDC42-201ENST00000315554 MED26O95402 600 aa7.51□□□□□ -1.21
CDC42-201ENST00000315554 DLGAP3O95886 979 aa7.51□□□□□ -1.21
CDC42-201ENST00000315554 SERPIND1P05546 499 aa7.51□□□□□ -1.21
CDC42-201ENST00000315554 LIPCP11150 499 aa7.51□□□□□ -1.21
CDC42-201ENST00000315554 KRT4P19013 534 aa7.51□□□□□ -1.21
CDC42-201ENST00000315554 TSPAN8P19075 237 aa7.51□□□□□ -1.21
CDC42-201ENST00000315554 EPORP19235 508 aa7.51□□□□□ -1.21
CDC42-201ENST00000315554 ITPKBP27987 946 aa7.51□□□□□ -1.21
CDC42-201ENST00000315554 EEF1DP29692 281 aaKnown RBP7.51□□□□□ -1.21
CDC42-201ENST00000315554 GGT5P36269 586 aa7.51□□□□□ -1.21
CDC42-201ENST00000315554 CCR8P51685 355 aa7.51□□□□□ -1.21
CDC42-201ENST00000315554 CYP4F2P78329 520 aa7.51□□□□□ -1.21
CDC42-201ENST00000315554 TAGLNQ01995 201 aaKnown RBP7.51□□□□□ -1.21
CDC42-201ENST00000315554 CDC16Q13042 620 aa7.51□□□□□ -1.21
CDC42-201ENST00000315554 GPS2Q13227 327 aa7.51□□□□□ -1.21
CDC42-201ENST00000315554 CLN3Q13286 438 aa7.51□□□□□ -1.21
CDC42-201ENST00000315554 SLC9A5Q14940 896 aa7.51□□□□□ -1.21
CDC42-201ENST00000315554 PDK4Q16654 411 aa7.51□□□□□ -1.21
CDC42-201ENST00000315554 HKDC1Q2TB90 917 aa7.51□□□□□ -1.21
CDC42-201ENST00000315554 ZC3H12BQ5HYM0 836 aaKnown RBP7.51□□□□□ -1.21
CDC42-201ENST00000315554 PRAMEF9Q5VWM5 478 aa7.51□□□□□ -1.21
CDC42-201ENST00000315554 LCN10Q6JVE6 187 aa7.51□□□□□ -1.21
CDC42-201ENST00000315554 NXPE4Q6UWF7 544 aa7.51□□□□□ -1.21
CDC42-201ENST00000315554 C6orf15Q6UXA7 325 aaPredicted RBP7.51□□□□□ -1.21
CDC42-201ENST00000315554 SH2D5Q6ZV89 423 aa7.51□□□□□ -1.21
CDC42-201ENST00000315554 TRABD2AQ86V40 505 aa7.51□□□□□ -1.21
CDC42-201ENST00000315554 CACNA2D3Q8IZS8 1091 aa7.51□□□□□ -1.21
CDC42-201ENST00000315554 MYRIPQ8NFW9 859 aa7.51□□□□□ -1.21
CDC42-201ENST00000315554 ACMSDQ8TDX5 336 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms