RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 HRASLS5Q96KN8 279 aa17.49■□□□□ 0.39
SPSB4-201ENST00000310546 C3orf14Q9HBI5 128 aa17.49■□□□□ 0.39
SPSB4-201ENST00000310546 ARNT2Q9HBZ2 717 aa17.49■□□□□ 0.39
SPSB4-201ENST00000310546 TMEM45AQ9NWC5 275 aa17.49■□□□□ 0.39
SPSB4-201ENST00000310546 SAMD4AQ9UPU9 718 aaKnown RBP17.49■□□□□ 0.39
SPSB4-201ENST00000310546 SMIM35A0A1B0GVV1 85 aa17.49■□□□□ 0.39
SPSB4-201ENST00000310546 FFAR3O14843 346 aa17.49■□□□□ 0.39
SPSB4-201ENST00000310546 GPR42O15529 346 aa17.49■□□□□ 0.39
SPSB4-201ENST00000310546 PRKACAP17612 351 aa17.49■□□□□ 0.39
SPSB4-201ENST00000310546 HMGCS1Q01581 520 aa17.49■□□□□ 0.39
SPSB4-201ENST00000310546 MXD1Q05195 221 aa17.49■□□□□ 0.39
SPSB4-201ENST00000310546 TNK1Q13470 666 aa17.49■□□□□ 0.39
SPSB4-201ENST00000310546 SGO1Q5FBB7 561 aa17.49■□□□□ 0.39
SPSB4-201ENST00000310546 PDZK1Q5T2W1 519 aa17.49■□□□□ 0.39
SPSB4-201ENST00000310546 NOTUMQ6P988 496 aa17.49■□□□□ 0.39
SPSB4-201ENST00000310546 CDH24Q86UP0 819 aa17.49■□□□□ 0.39
SPSB4-201ENST00000310546 UTP15Q8TED0 518 aaKnown RBP17.49■□□□□ 0.39
SPSB4-201ENST00000310546 MSANTD3Q96H12 275 aa17.49■□□□□ 0.39
SPSB4-201ENST00000310546 PPP1R2P1Q96PQ5 205 aa17.49■□□□□ 0.39
SPSB4-201ENST00000310546 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.49■□□□□ 0.39
SPSB4-201ENST00000310546 SLC25A51Q9H1U9 297 aa17.49■□□□□ 0.39
SPSB4-201ENST00000310546 UXTQ9UBK9 157 aaPredicted RBP17.49■□□□□ 0.39
SPSB4-201ENST00000310546 COMMD10Q9Y6G5 202 aa17.49■□□□□ 0.39
SPSB4-201ENST00000310546 OR5K3A6NET4 321 aa17.48■□□□□ 0.39
SPSB4-201ENST00000310546 GPX5O75715 221 aa17.48■□□□□ 0.39
SPSB4-201ENST00000310546 ALPPP05187 535 aa17.48■□□□□ 0.39
SPSB4-201ENST00000310546 ZNF250P15622 560 aa17.48■□□□□ 0.39
SPSB4-201ENST00000310546 SUOXP51687 545 aa17.48■□□□□ 0.39
SPSB4-201ENST00000310546 HK3P52790 923 aa17.48■□□□□ 0.39
SPSB4-201ENST00000310546 IHHQ14623 411 aa17.48■□□□□ 0.39
SPSB4-201ENST00000310546 VEPH1Q14D04 833 aa17.48■□□□□ 0.39
SPSB4-201ENST00000310546 ZBTB6Q15916 424 aa17.48■□□□□ 0.39
SPSB4-201ENST00000310546 DCAF4L1Q3SXM0 396 aa17.48■□□□□ 0.39
SPSB4-201ENST00000310546 PLET1Q6UQ28 207 aa17.48■□□□□ 0.39
SPSB4-201ENST00000310546 ZNF605Q86T29 641 aa17.48■□□□□ 0.39
SPSB4-201ENST00000310546 ZSWIM9Q86XI8 627 aa17.48■□□□□ 0.39
SPSB4-201ENST00000310546 RDH10Q8IZV5 341 aa17.48■□□□□ 0.39
SPSB4-201ENST00000310546 LIX1Q8N485 282 aa17.48■□□□□ 0.39
SPSB4-201ENST00000310546 PITX2Q99697 317 aa17.48■□□□□ 0.39
SPSB4-201ENST00000310546 AGO3Q9H9G7 860 aaKnown RBP17.48■□□□□ 0.39
SPSB4-201ENST00000310546 FNDC1Q4ZHG4 1894 aaPredicted RBP17.48■□□□□ 0.39
SPSB4-201ENST00000310546 KIAA0100Q14667 2235 aaKnown RBP17.48■□□□□ 0.39
SPSB4-201ENST00000310546 A0A075B6Q4 140 aa17.48■□□□□ 0.39
SPSB4-201ENST00000310546 LCHNA4D1U4 455 aa17.48■□□□□ 0.39
SPSB4-201ENST00000310546 FAM220BPB1ANY3 271 aa17.48■□□□□ 0.39
SPSB4-201ENST00000310546 ATP6V1G2-DDX39BF2Z307 99 aa17.48■□□□□ 0.39
SPSB4-201ENST00000310546 STX16O14662 325 aa17.48■□□□□ 0.39
SPSB4-201ENST00000310546 TIMM50Q3ZCQ8 353 aa17.48■□□□□ 0.39
SPSB4-201ENST00000310546 ZNF598Q86UK7 904 aaKnown RBP17.48■□□□□ 0.39
SPSB4-201ENST00000310546 GPSM1Q86YR5 675 aa17.48■□□□□ 0.39
SPSB4-201ENST00000310546 OR8H3Q8N146 312 aa17.48■□□□□ 0.39
SPSB4-201ENST00000310546 EFHBQ8N7U6 833 aa17.48■□□□□ 0.39
SPSB4-201ENST00000310546 NLGN4YQ8NFZ3 816 aaPredicted RBP17.48■□□□□ 0.39
SPSB4-201ENST00000310546 CATSPERZQ9NTU4 200 aa17.48■□□□□ 0.39
SPSB4-201ENST00000310546 TMEM30AQ9NV96 361 aa17.48■□□□□ 0.39
SPSB4-201ENST00000310546 TRAV19A0A0A6YYK7 116 aa17.48■□□□□ 0.39
SPSB4-201ENST00000310546 CIB4A0PJX0 185 aa17.48■□□□□ 0.39
SPSB4-201ENST00000310546 TRIM77I1YAP6 450 aa17.48■□□□□ 0.39
SPSB4-201ENST00000310546 DUSP11O75319 330 aaKnown RBP17.48■□□□□ 0.39
SPSB4-201ENST00000310546 C1QBP02746 253 aa17.48■□□□□ 0.39
SPSB4-201ENST00000310546 CYBAP13498 195 aa17.48■□□□□ 0.39
SPSB4-201ENST00000310546 RUNX1T1Q06455 604 aa17.48■□□□□ 0.39
SPSB4-201ENST00000310546 SNTA1Q13424 505 aa17.48■□□□□ 0.39
SPSB4-201ENST00000310546 ATG9BQ674R7 924 aa17.48■□□□□ 0.39
SPSB4-201ENST00000310546 LAMTOR1Q6IAA8 161 aa17.48■□□□□ 0.39
SPSB4-201ENST00000310546 TMC8Q8IU68 726 aa17.48■□□□□ 0.39
SPSB4-201ENST00000310546 SLC44A2Q8IWA5 706 aaPredicted RBP17.48■□□□□ 0.39
SPSB4-201ENST00000310546 OR4F6Q8NGB9 312 aa17.48■□□□□ 0.39
SPSB4-201ENST00000310546 GFM1Q96RP9 751 aaKnown RBP17.48■□□□□ 0.39
SPSB4-201ENST00000310546 ZNF382Q96SR6 550 aa17.48■□□□□ 0.39
SPSB4-201ENST00000310546 PAAF1Q9BRP4 392 aa17.48■□□□□ 0.39
SPSB4-201ENST00000310546 ST3GAL5Q9UNP4 418 aa17.48■□□□□ 0.39
SPSB4-201ENST00000310546 SMIM28A0A1B0GU29 152 aa17.47■□□□□ 0.39
SPSB4-201ENST00000310546 H3BUI4 141 aa17.47■□□□□ 0.39
SPSB4-201ENST00000310546 MOCS2O96007 188 aaPredicted RBP17.47■□□□□ 0.39
SPSB4-201ENST00000310546 SLC10A7Q0GE19 358 aa17.47■□□□□ 0.39
SPSB4-201ENST00000310546 FOXD4Q12950 439 aaPredicted RBP17.47■□□□□ 0.39
SPSB4-201ENST00000310546 ASAH1Q13510 395 aa17.47■□□□□ 0.39
SPSB4-201ENST00000310546 SETMARQ53H47 684 aaPredicted RBP17.47■□□□□ 0.39
SPSB4-201ENST00000310546 SLC35F1Q5T1Q4 408 aa17.47■□□□□ 0.39
SPSB4-201ENST00000310546 TIGD7Q6NT04 549 aaPredicted RBP17.47■□□□□ 0.39
SPSB4-201ENST00000310546 FAM171BQ6P995 826 aa17.47■□□□□ 0.39
SPSB4-201ENST00000310546 PGAP3Q96FM1 320 aaPredicted RBP17.47■□□□□ 0.39
SPSB4-201ENST00000310546 TPD52L3Q96J77 140 aa17.47■□□□□ 0.39
SPSB4-201ENST00000310546 INPP5KQ9BT40 448 aa17.47■□□□□ 0.39
SPSB4-201ENST00000310546 ING3Q9NXR8 418 aa17.47■□□□□ 0.39
SPSB4-201ENST00000310546 FNDC3AQ9Y2H6 1198 aaKnown RBP17.47■□□□□ 0.39
SPSB4-201ENST00000310546 BTN3A3O00478 584 aa17.47■□□□□ 0.39
SPSB4-201ENST00000310546 GJB3O75712 270 aa17.47■□□□□ 0.39
SPSB4-201ENST00000310546 TAF6P49848 677 aa17.47■□□□□ 0.39
SPSB4-201ENST00000310546 KCNQ1P51787 676 aa17.47■□□□□ 0.39
SPSB4-201ENST00000310546 GPR19Q15760 415 aa17.47■□□□□ 0.39
SPSB4-201ENST00000310546 WSCD1Q658N2 575 aa17.47■□□□□ 0.39
SPSB4-201ENST00000310546 OR4L1Q8NH43 312 aa17.47■□□□□ 0.39
SPSB4-201ENST00000310546 SH3KBP1Q96B97 665 aa17.47■□□□□ 0.39
SPSB4-201ENST00000310546 IMP4Q96G21 291 aaKnown RBP17.47■□□□□ 0.39
SPSB4-201ENST00000310546 SARS2Q9NP81 518 aaKnown RBP17.47■□□□□ 0.39
SPSB4-201ENST00000310546 EVA1BQ9NVM1 165 aa17.47■□□□□ 0.39
SPSB4-201ENST00000310546 KLHL21Q9UJP4 597 aa17.47■□□□□ 0.39
SPSB4-201ENST00000310546 MED16Q9Y2X0 877 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms