RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 OR2T12Q8NG77 320 aa10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 DYNC2LI1Q8TCX1 351 aa10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 VPS35Q96QK1 796 aa10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 ACOX2Q99424 681 aa10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 ACTL8Q9H568 366 aa10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 ACTR8Q9H981 624 aa10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 ZNF304Q9HCX3 659 aa10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 PCDH12Q9NPG4 1184 aa10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 ADGRE2Q9UHX3 823 aa10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 MSRAQ9UJ68 235 aa10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 TSR3Q9UJK0 312 aaKnown RBP10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 HSPE1-MOB4S4R3N1 261 aa10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 F5P12259 2224 aa10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 TRIOBPQ9H2D6 2365 aa10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 C2orf16Q68DN1 1984 aa10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 SAGE2PA6NJ88 616 aa10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 NOBOXO60393 691 aa10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 IGSF6O95976 241 aa10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 CYP17A1P05093 508 aa10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 BMP4P12644 408 aa10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 PFKLP17858 780 aa10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 CD40LGP29965 261 aa10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 AGTR2P50052 363 aa10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 CXCR4P61073 352 aa10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 ADPRMQ3LIE5 342 aa10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 PLA2G4EQ3MJ16 856 aa10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 SYT6Q5T7P8 510 aaPredicted RBP10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 FAM122CQ6P4D5 195 aa10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 C22orf39Q6P5X5 142 aa10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 CYP20A1Q6UW02 462 aa10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 FAM151BQ6UXP7 276 aa10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 RFLNAQ6ZTI6 216 aa10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 CELF5Q8N6W0 485 aaKnown RBP10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 LILRB1Q8NHL6 650 aaPredicted RBP10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 RORBQ92753 470 aa10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 REXO5Q96IC2 774 aaKnown RBP10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 GALPQ9UBC7 116 aa10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 NPEPPSL1A6NEC2 478 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 IQCF5A8MTL0 148 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 E2F3O00716 465 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 GNGT2O14610 69 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 BET1O15155 118 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 OR4F21O95013 312 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 NADKO95544 446 aaPredicted RBP10□□□□□ -0.81
APOBEC3F-201ENST00000308521 NR4A1P22736 598 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 FSHRP23945 695 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 PSMA3P25788 255 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 AP1S1P61966 158 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 TJAP1Q5JTD0 557 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 HIPK1Q86Z02 1210 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 FAM86B1Q8N7N1 296 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 SETD9Q8NE22 299 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 FBXO30Q8TB52 745 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 FIG4Q92562 907 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 ZNF300Q96RE9 604 aaPredicted RBP10□□□□□ -0.81
APOBEC3F-201ENST00000308521 GON7Q9BXV9 100 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 DUSP21Q9H596 190 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 LTB4R2Q9NPC1 389 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 C12orf4Q9NQ89 552 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 LIMD1Q9UGP4 676 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 DPP7Q9UHL4 492 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 SLC25A13Q9UJS0 675 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 ORC6Q9Y5N6 252 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 HELZP42694 1942 aaKnown RBP10□□□□□ -0.81
APOBEC3F-201ENST00000308521 HEPACAM2A8MVW5 462 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 BTN3A1O00481 513 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 AXIN1O15169 862 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 ZW10O43264 779 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 PRKD3O94806 890 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 PTTG1O95997 202 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 RETP07949 1114 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 G6PDP11413 515 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 FOSL1P15407 271 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 DCTP40126 519 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 CASP3P42574 277 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 COPZ1P61923 177 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 SNRPD1P62314 119 aaKnown RBP10□□□□□ -0.81
APOBEC3F-201ENST00000308521 FOXD4Q12950 439 aaPredicted RBP10□□□□□ -0.81
APOBEC3F-201ENST00000308521 SMU1Q2TAY7 513 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 PAGE2BQ5JRK9 111 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 TANGO2Q6ICL3 276 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 PDE12Q6L8Q7 609 aaKnown RBP10□□□□□ -0.81
APOBEC3F-201ENST00000308521 RTL10Q7L3V2 364 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 ADCK1Q86TW2 530 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 TBC1D20Q96BZ9 403 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 RHBDF1Q96CC6 855 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 CEP19Q96LK0 163 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 ASB16Q96NS5 453 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 SAMD11Q96NU1 681 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 BTBD2Q9BX70 525 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 MKRN2Q9H000 416 aaKnown RBP10□□□□□ -0.81
APOBEC3F-201ENST00000308521 ZFYVE1Q9HBF4 777 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 IL17CQ9P0M4 197 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 TNFRSF10DQ9UBN6 386 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 ATPIF1Q9UII2 106 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 TMEFF2Q9UIK5 374 aaPredicted RBP10□□□□□ -0.81
APOBEC3F-201ENST00000308521 MOSPD1Q9UJG1 213 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 NUP50Q9UKX7 468 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 ERVW-1Q9UQF0 538 aa10□□□□□ -0.81
APOBEC3F-201ENST00000308521 HS3ST2Q9Y278 367 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms