RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 NUP210LQ5VU65 1888 aa10.51□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 TPRP12270 2363 aaKnown RBP10.51□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 LOC101059948A0A1B0GTJ6 334 aa10.51□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 A0A1B0GX78 115 aa10.51□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 C21orf140B9A014 251 aa10.51□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 K7EPI3 171 aa10.51□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 TK2O00142 265 aa10.51□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 MEN1O00255 615 aa10.51□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 DSCR3O14972 297 aa10.51□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 TAPBPO15533 448 aa10.51□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 PRPF4O43172 522 aaKnown RBP eCLIP10.51□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 OR1F1O43749 312 aa10.51□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 GLRA3O75311 464 aa10.51□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 H2AFYO75367 372 aaKnown RBP10.51□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 SLC35G6P0C7Q6 338 aa10.51□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 ATXN8OSP0DMR3 200 aa10.51□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 PYGBP11216 843 aa10.51□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 PIM1P11309 404 aaPredicted RBP10.51□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 LIFP15018 202 aa10.51□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 TCN2P20062 427 aa10.51□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 ALAS2P22557 587 aa10.51□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 ITPKBP27987 946 aa10.51□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 PIK3CGP48736 1102 aa10.51□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 ALDH18A1P54886 795 aaKnown RBP10.51□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 RPS15P62841 145 aaKnown RBP10.51□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 CXADRP78310 365 aa10.51□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 REEP5Q00765 189 aa10.51□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 DNASE1L3Q13609 305 aa10.51□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 NAA30Q147X3 362 aaPredicted RBP10.51□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 SETDB1Q15047 1291 aa10.51□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 RASA2Q15283 850 aa10.51□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 ZXDCQ2QGD7 858 aaPredicted RBP10.51□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 MUM1Q2TAK8 710 aa10.51□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 CATSPEREQ5SY80 951 aa10.51□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 C1orf189Q5VU69 101 aa10.51□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 NXPE4Q6UWF7 544 aa10.51□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 TTLL10Q6ZVT0 673 aa10.51□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 PLD3Q8IV08 490 aa10.51□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 KRT78Q8N1N4 520 aa10.51□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 CAMKVQ8NCB2 501 aa10.51□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 ABHD11Q8NFV4 315 aa10.51□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 GPR78Q96P69 363 aa10.51□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 MRPL57Q9BQC6 102 aaKnown RBP10.51□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 ROPN1BQ9BZX4 212 aaPredicted RBP10.51□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 SPRY4Q9C004 299 aa10.51□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 ROPN1Q9HAT0 212 aaPredicted RBP10.51□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 STARD5Q9NSY2 213 aa10.51□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 ZNF358Q9NW07 568 aa10.51□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 DHCR7Q9UBM7 475 aaKnown RBP10.51□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 SEC16AO15027 2179 aa10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 LOC105369274A0A096LPK9 316 aa10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 LOC102723532A0A0G2JNH3 316 aa10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 TRBC2A0A5B9 178 aa10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 HYKKA2RU49 373 aa10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 FITM1A5D6W6 292 aa10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 CCDC151A5D8V7 595 aa10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 ZNF891A8MT65 544 aaPredicted RBP10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 H3BMH7 237 aa10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 MAP2K7O14733 419 aa10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 KATNA1O75449 491 aa10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 SERPIND1P05546 499 aa10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 CTSBP07858 339 aa10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 C1GALT1C1LP0DN25 315 aa10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 EPB42P16452 691 aa10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 RORAP35398 523 aa10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 ARL1P40616 181 aaPredicted RBP10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 BCL6P41182 706 aa10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 AGTR2P50052 363 aa10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 DCDP81605 110 aaKnown RBP10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 MC1RQ01726 317 aa10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 MEF2AQ02078 507 aaPredicted RBP10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 RGS1Q08116 209 aa10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 SLBPQ14493 270 aaKnown RBP eCLIP10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 RBBP5Q15291 538 aaKnown RBP10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 HIST2H2ACQ16777 129 aaPredicted RBP10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 KRT71Q3SY84 523 aa10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 XKR6Q5GH73 641 aa10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 PAGE2BQ5JRK9 111 aa10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 GARNL3Q5VVW2 1013 aa10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 ATG9BQ674R7 924 aa10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 HIST2H2AA3Q6FI13 130 aa10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 FBXO42Q6P3S6 717 aa10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 ASPGQ86U10 573 aa10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 OR4N4Q8N0Y3 316 aa10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 TEX9Q8N6V9 391 aa10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 PTGR2Q8N8N7 351 aaPredicted RBP10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 CCDC63Q8NA47 563 aa10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 MFSD9Q8NBP5 474 aa10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 TTLQ8NG68 377 aa10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 MZB1Q8WU39 189 aa10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 CT55Q8WUE5 264 aa10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 ESAMQ96AP7 390 aa10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 PHF21BQ96EK2 531 aa10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 ZNF285Q96NJ3 590 aa10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 OR2A5Q96R48 311 aa10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 IQCGQ9H095 443 aaKnown RBP10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 CHST8Q9H2A9 424 aa10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 IFT80Q9P2H3 777 aaPredicted RBP10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 DCDC2Q9UHG0 476 aa10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 RUVBL1Q9Y265 456 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms