RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 FAM129BQ96TA1 746 aa21.2■□□□□ 0.98
TPM4-201ENST00000300933 PALMDQ9NP74 551 aa21.2■□□□□ 0.98
TPM4-201ENST00000300933 DKK3Q9UBP4 350 aa21.2■□□□□ 0.98
TPM4-201ENST00000300933 LIMD1Q9UGP4 676 aa21.2■□□□□ 0.98
TPM4-201ENST00000300933 SH2B3Q9UQQ2 575 aa21.2■□□□□ 0.98
TPM4-201ENST00000300933 NUMA1Q14980 2115 aa21.2■□□□□ 0.98
TPM4-201ENST00000300933 EIF3FO00303 357 aaPredicted RBP21.2■□□□□ 0.98
TPM4-201ENST00000300933 KPNA5O15131 536 aa21.2■□□□□ 0.98
TPM4-201ENST00000300933 HOXC11O43248 304 aaPredicted RBP21.2■□□□□ 0.98
TPM4-201ENST00000300933 GPR1P46091 355 aa21.2■□□□□ 0.98
TPM4-201ENST00000300933 AP1S2P56377 157 aa21.2■□□□□ 0.98
TPM4-201ENST00000300933 MEF2AQ02078 507 aaPredicted RBP21.2■□□□□ 0.98
TPM4-201ENST00000300933 GRSF1Q12849 480 aaKnown RBP eCLIP21.2■□□□□ 0.98
TPM4-201ENST00000300933 IRAK1BP1Q5VVH5 260 aa21.2■□□□□ 0.98
TPM4-201ENST00000300933 NOXRED1Q6NXP6 359 aa21.2■□□□□ 0.98
TPM4-201ENST00000300933 GPR156Q8NFN8 814 aa21.2■□□□□ 0.98
TPM4-201ENST00000300933 SERHLQ9NQF3 203 aa21.2■□□□□ 0.98
TPM4-201ENST00000300933 PSME2Q9UL46 239 aa21.2■□□□□ 0.98
TPM4-201ENST00000300933 GPC6Q9Y625 555 aaPredicted RBP21.2■□□□□ 0.98
TPM4-201ENST00000300933 PLXNA2O75051 1894 aa21.19■□□□□ 0.98
TPM4-201ENST00000300933 SLC5A10A0PJK1 596 aa21.19■□□□□ 0.98
TPM4-201ENST00000300933 DYTNA2CJ06 578 aa21.19■□□□□ 0.98
TPM4-201ENST00000300933 PSIP1O75475 530 aaKnown RBP21.19■□□□□ 0.98
TPM4-201ENST00000300933 NPPAP01160 153 aa21.19■□□□□ 0.98
TPM4-201ENST00000300933 GBAP04062 536 aa21.19■□□□□ 0.98
TPM4-201ENST00000300933 AMD1P17707 334 aa21.19■□□□□ 0.98
TPM4-201ENST00000300933 PRLHRP49683 370 aa21.19■□□□□ 0.98
TPM4-201ENST00000300933 PIGFQ07326 219 aa21.19■□□□□ 0.98
TPM4-201ENST00000300933 STARD3Q14849 445 aa21.19■□□□□ 0.98
TPM4-201ENST00000300933 HNRNPA1L2Q32P51 320 aaKnown RBP21.19■□□□□ 0.98
TPM4-201ENST00000300933 ZNF773Q6PK81 442 aa21.19■□□□□ 0.98
TPM4-201ENST00000300933 PLA2G15Q8NCC3 412 aa21.19■□□□□ 0.98
TPM4-201ENST00000300933 COQ10AQ96MF6 247 aa21.19■□□□□ 0.98
TPM4-201ENST00000300933 DGCR6LQ9BY27 220 aa21.19■□□□□ 0.98
TPM4-201ENST00000300933 RAD21L1Q9H4I0 556 aa21.19■□□□□ 0.98
TPM4-201ENST00000300933 ADGRE2Q9UHX3 823 aa21.19■□□□□ 0.98
TPM4-201ENST00000300933 ERVK-11Q9UQG0 969 aa21.19■□□□□ 0.98
TPM4-201ENST00000300933 MAGEB17A8MXT2 336 aa21.19■□□□□ 0.98
TPM4-201ENST00000300933 H3BM21 787 aa21.19■□□□□ 0.98
TPM4-201ENST00000300933 RFXAPO00287 272 aa21.19■□□□□ 0.98
TPM4-201ENST00000300933 TOR1BO14657 336 aa21.19■□□□□ 0.98
TPM4-201ENST00000300933 CNOT3O75175 753 aaKnown RBP21.19■□□□□ 0.98
TPM4-201ENST00000300933 AP2A2O94973 939 aa21.19■□□□□ 0.98
TPM4-201ENST00000300933 CPNE6O95741 557 aa21.19■□□□□ 0.98
TPM4-201ENST00000300933 ALBP02768 609 aa21.19■□□□□ 0.98
TPM4-201ENST00000300933 JUPP14923 745 aa21.19■□□□□ 0.98
TPM4-201ENST00000300933 SHMT2P34897 504 aa21.19■□□□□ 0.98
TPM4-201ENST00000300933 RAD23AP54725 363 aa21.19■□□□□ 0.98
TPM4-201ENST00000300933 CLDN8P56748 225 aa21.19■□□□□ 0.98
TPM4-201ENST00000300933 SP140Q13342 867 aa21.19■□□□□ 0.98
TPM4-201ENST00000300933 CATSPEREQ5SY80 951 aa21.19■□□□□ 0.98
TPM4-201ENST00000300933 METTL2BQ6P1Q9 378 aaKnown RBP21.19■□□□□ 0.98
TPM4-201ENST00000300933 TRMT11Q7Z4G4 463 aaKnown RBP21.19■□□□□ 0.98
TPM4-201ENST00000300933 UBE2Q1Q7Z7E8 422 aa21.19■□□□□ 0.98
TPM4-201ENST00000300933 GALNT10Q86SR1 603 aa21.19■□□□□ 0.98
TPM4-201ENST00000300933 SYTL1Q8IYJ3 562 aa21.19■□□□□ 0.98
TPM4-201ENST00000300933 CLEC4FQ8N1N0 589 aa21.19■□□□□ 0.98
TPM4-201ENST00000300933 NCLNQ969V3 563 aa21.19■□□□□ 0.98
TPM4-201ENST00000300933 TIFAQ96CG3 184 aa21.19■□□□□ 0.98
TPM4-201ENST00000300933 NPC1O15118 1278 aa21.18■□□□□ 0.98
TPM4-201ENST00000300933 KDM1AO60341 852 aa21.18■□□□□ 0.98
TPM4-201ENST00000300933 OXSR1O95747 527 aaPredicted RBP21.18■□□□□ 0.98
TPM4-201ENST00000300933 PRNPP04156 253 aa21.18■□□□□ 0.98
TPM4-201ENST00000300933 ADRB3P13945 408 aa21.18■□□□□ 0.98
TPM4-201ENST00000300933 GGT1P19440 569 aa21.18■□□□□ 0.98
TPM4-201ENST00000300933 NFE2L1Q14494 772 aa21.18■□□□□ 0.98
TPM4-201ENST00000300933 SPCS2Q15005 226 aa21.18■□□□□ 0.98
TPM4-201ENST00000300933 CDKL4Q5MAI5 379 aa21.18■□□□□ 0.98
TPM4-201ENST00000300933 ANKRD34AQ69YU3 496 aa21.18■□□□□ 0.98
TPM4-201ENST00000300933 PROSER1Q86XN7 944 aa21.18■□□□□ 0.98
TPM4-201ENST00000300933 ABHD11Q8NFV4 315 aa21.18■□□□□ 0.98
TPM4-201ENST00000300933 PNPT1Q8TCS8 783 aaKnown RBP21.18■□□□□ 0.98
TPM4-201ENST00000300933 NEIL2Q969S2 332 aa21.18■□□□□ 0.98
TPM4-201ENST00000300933 TUBA1CQ9BQE3 449 aa21.18■□□□□ 0.98
TPM4-201ENST00000300933 LTB4R2Q9NPC1 389 aa21.18■□□□□ 0.98
TPM4-201ENST00000300933 ATAD3AQ9NVI7 634 aa21.18■□□□□ 0.98
TPM4-201ENST00000300933 PLAGL1Q9UM63 463 aa21.18■□□□□ 0.98
TPM4-201ENST00000300933 C2orf16Q68DN1 1984 aa21.18■□□□□ 0.98
TPM4-201ENST00000300933 SAP18O00422 153 aaKnown RBP21.18■□□□□ 0.98
TPM4-201ENST00000300933 KPNA4O00629 521 aaPredicted RBP21.18■□□□□ 0.98
TPM4-201ENST00000300933 EPHX1P07099 455 aa21.18■□□□□ 0.98
TPM4-201ENST00000300933 ANXA6P08133 673 aa21.18■□□□□ 0.98
TPM4-201ENST00000300933 IL12RB1P42701 662 aa21.18■□□□□ 0.98
TPM4-201ENST00000300933 RUNDC3AQ59EK9 446 aa21.18■□□□□ 0.98
TPM4-201ENST00000300933 XAF1Q6GPH4 301 aa21.18■□□□□ 0.98
TPM4-201ENST00000300933 HS3ST5Q8IZT8 346 aa21.18■□□□□ 0.98
TPM4-201ENST00000300933 SLC7A5P1Q8MH63 180 aa21.18■□□□□ 0.98
TPM4-201ENST00000300933 ZNF548Q8NEK5 533 aaPredicted RBP21.18■□□□□ 0.98
TPM4-201ENST00000300933 OR8D1Q8WZ84 308 aa21.18■□□□□ 0.98
TPM4-201ENST00000300933 HPS1Q92902 700 aa21.18■□□□□ 0.98
TPM4-201ENST00000300933 SMARCD2Q92925 531 aa21.18■□□□□ 0.98
TPM4-201ENST00000300933 NUS1Q96E22 293 aa21.18■□□□□ 0.98
TPM4-201ENST00000300933 SGK2Q9HBY8 427 aa21.18■□□□□ 0.98
TPM4-201ENST00000300933 GIN1Q9NXP7 522 aa21.18■□□□□ 0.98
TPM4-201ENST00000300933 SLC27A6Q9Y2P4 619 aa21.18■□□□□ 0.98
TPM4-201ENST00000300933 SLC16A5O15375 505 aa21.17■□□□□ 0.98
TPM4-201ENST00000300933 SEC14L2O76054 403 aa21.17■□□□□ 0.98
TPM4-201ENST00000300933 LDLRP01130 860 aa21.17■□□□□ 0.98
TPM4-201ENST00000300933 CATP04040 527 aaKnown RBP21.17■□□□□ 0.98
TPM4-201ENST00000300933 IL7RP16871 459 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms