RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 DHRS7Q9Y394 339 aa18.61■□□□□ 0.57
CXCL3-201ENST00000296026 POLEQ07864 2286 aa18.6■□□□□ 0.57
CXCL3-201ENST00000296026 CACNA1DQ01668 2161 aa18.6■□□□□ 0.57
CXCL3-201ENST00000296026 LOC102723996A0A087X1L8 192 aa18.6■□□□□ 0.57
CXCL3-201ENST00000296026 TRAV17A0A0B4J275 112 aa18.6■□□□□ 0.57
CXCL3-201ENST00000296026 H7BY64 318 aa18.6■□□□□ 0.57
CXCL3-201ENST00000296026 JRKO75564 520 aa18.6■□□□□ 0.57
CXCL3-201ENST00000296026 ENO3P13929 434 aaPredicted RBP18.6■□□□□ 0.57
CXCL3-201ENST00000296026 IMPA1P29218 277 aa18.6■□□□□ 0.57
CXCL3-201ENST00000296026 SKIV2L2P42285 1042 aaKnown RBP18.6■□□□□ 0.57
CXCL3-201ENST00000296026 SLC1A2P43004 574 aa18.6■□□□□ 0.57
CXCL3-201ENST00000296026 MAT1AQ00266 395 aaKnown RBP18.6■□□□□ 0.57
CXCL3-201ENST00000296026 PCOLCEQ15113 449 aa18.6■□□□□ 0.57
CXCL3-201ENST00000296026 NDUFA9Q16795 377 aa18.6■□□□□ 0.57
CXCL3-201ENST00000296026 TMEM205Q6UW68 189 aa18.6■□□□□ 0.57
CXCL3-201ENST00000296026 CYHR1Q6ZMK1 362 aa18.6■□□□□ 0.57
CXCL3-201ENST00000296026 MCUQ8NE86 351 aa18.6■□□□□ 0.57
CXCL3-201ENST00000296026 MAGOHBQ96A72 148 aaKnown RBP18.6■□□□□ 0.57
CXCL3-201ENST00000296026 PRAP1Q96NZ9 151 aa18.6■□□□□ 0.57
CXCL3-201ENST00000296026 SERPINB12Q96P63 405 aa18.6■□□□□ 0.57
CXCL3-201ENST00000296026 ZNF700Q9H0M5 742 aa18.6■□□□□ 0.57
CXCL3-201ENST00000296026 MRPS2Q9Y399 296 aaKnown RBP18.6■□□□□ 0.57
CXCL3-201ENST00000296026 CNTRLQ7Z7A1 2325 aa18.6■□□□□ 0.57
CXCL3-201ENST00000296026 F10P00742 488 aa18.59■□□□□ 0.57
CXCL3-201ENST00000296026 STATHP02808 62 aa18.59■□□□□ 0.57
CXCL3-201ENST00000296026 STSP08842 583 aa18.59■□□□□ 0.57
CXCL3-201ENST00000296026 ITGAMP11215 1152 aa18.59■□□□□ 0.57
CXCL3-201ENST00000296026 AVPR1BP47901 424 aa18.59■□□□□ 0.57
CXCL3-201ENST00000296026 EFNA3P52797 238 aa18.59■□□□□ 0.57
CXCL3-201ENST00000296026 SNRPNP63162 240 aaKnown RBP18.59■□□□□ 0.57
CXCL3-201ENST00000296026 LONRF1Q17RB8 773 aa18.59■□□□□ 0.57
CXCL3-201ENST00000296026 ZNF324BQ6AW86 544 aaPredicted RBP18.59■□□□□ 0.57
CXCL3-201ENST00000296026 UBE2R2Q712K3 238 aaPredicted RBP18.59■□□□□ 0.57
CXCL3-201ENST00000296026 CPNE9Q8IYJ1 553 aa18.59■□□□□ 0.57
CXCL3-201ENST00000296026 AMER2Q8N7J2 671 aa18.59■□□□□ 0.57
CXCL3-201ENST00000296026 OR9A4Q8NGU2 314 aa18.59■□□□□ 0.57
CXCL3-201ENST00000296026 CD200R1Q8TD46 325 aa18.59■□□□□ 0.57
CXCL3-201ENST00000296026 TAAR6Q96RI8 345 aa18.59■□□□□ 0.57
CXCL3-201ENST00000296026 C20orf96Q9NUD7 363 aaPredicted RBP18.59■□□□□ 0.57
CXCL3-201ENST00000296026 COMMD10Q9Y6G5 202 aa18.59■□□□□ 0.57
CXCL3-201ENST00000296026 ZG16O60844 167 aa18.58■□□□□ 0.56
CXCL3-201ENST00000296026 HAUS5O94927 633 aa18.58■□□□□ 0.56
CXCL3-201ENST00000296026 C8orf89P0DMQ9 161 aa18.58■□□□□ 0.56
CXCL3-201ENST00000296026 ICAM2P13598 275 aa18.58■□□□□ 0.56
CXCL3-201ENST00000296026 ZRSR2Q15696 482 aaKnown RBP18.58■□□□□ 0.56
CXCL3-201ENST00000296026 INAQ16352 499 aa18.58■□□□□ 0.56
CXCL3-201ENST00000296026 PIWIL4Q7Z3Z4 852 aaKnown RBP18.58■□□□□ 0.56
CXCL3-201ENST00000296026 FJX1Q86VR8 437 aa18.58■□□□□ 0.56
CXCL3-201ENST00000296026 LRRC8AQ8IWT6 810 aa18.58■□□□□ 0.56
CXCL3-201ENST00000296026 LMNTD2Q8IXW0 634 aa18.58■□□□□ 0.56
CXCL3-201ENST00000296026 AGGF1Q8N302 714 aaeCLIP18.58■□□□□ 0.56
CXCL3-201ENST00000296026 CALML6Q8TD86 181 aa18.58■□□□□ 0.56
CXCL3-201ENST00000296026 METTL21AQ8WXB1 218 aa18.58■□□□□ 0.56
CXCL3-201ENST00000296026 MS4A14Q96JA4 679 aa18.58■□□□□ 0.56
CXCL3-201ENST00000296026 TUBB6Q9BUF5 446 aa18.58■□□□□ 0.56
CXCL3-201ENST00000296026 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.58■□□□□ 0.56
CXCL3-201ENST00000296026 CCDC177Q9NQR7 707 aaPredicted RBP18.58■□□□□ 0.56
CXCL3-201ENST00000296026 TMEM184CQ9NVA4 438 aa18.58■□□□□ 0.56
CXCL3-201ENST00000296026 FBXO5Q9UKT4 447 aa18.58■□□□□ 0.56
CXCL3-201ENST00000296026 MAD1L1Q9Y6D9 718 aa18.58■□□□□ 0.56
CXCL3-201ENST00000296026 CPAMD8Q8IZJ3 1885 aa18.57■□□□□ 0.56
CXCL3-201ENST00000296026 A0A1B0GUH1 482 aa18.57■□□□□ 0.56
CXCL3-201ENST00000296026 H0YIG0 161 aa18.57■□□□□ 0.56
CXCL3-201ENST00000296026 WDPCPO95876 746 aa18.57■□□□□ 0.56
CXCL3-201ENST00000296026 HRH2P25021 359 aa18.57■□□□□ 0.56
CXCL3-201ENST00000296026 COILP38432 576 aaPredicted RBP18.57■□□□□ 0.56
CXCL3-201ENST00000296026 MAGEA3P43357 314 aa18.57■□□□□ 0.56
CXCL3-201ENST00000296026 TDGF1P3P51864 188 aa18.57■□□□□ 0.56
CXCL3-201ENST00000296026 AP2B1P63010 937 aa18.57■□□□□ 0.56
CXCL3-201ENST00000296026 MPP1Q00013 466 aa18.57■□□□□ 0.56
CXCL3-201ENST00000296026 HIBCHQ6NVY1 386 aaPredicted RBP18.57■□□□□ 0.56
CXCL3-201ENST00000296026 CCDC137Q6PK04 289 aaKnown RBP18.57■□□□□ 0.56
CXCL3-201ENST00000296026 VN1R4Q7Z5H5 301 aa18.57■□□□□ 0.56
CXCL3-201ENST00000296026 ZGRF1Q86YA3 2104 aa18.57■□□□□ 0.56
CXCL3-201ENST00000296026 RASGEF1CQ8N431 466 aa18.57■□□□□ 0.56
CXCL3-201ENST00000296026 NR4A3Q92570 626 aa18.57■□□□□ 0.56
CXCL3-201ENST00000296026 SIGLEC10Q96LC7 697 aa18.57■□□□□ 0.56
CXCL3-201ENST00000296026 IMMP1LQ96LU5 166 aa18.57■□□□□ 0.56
CXCL3-201ENST00000296026 AARSD1Q9BTE6 412 aaKnown RBP18.57■□□□□ 0.56
CXCL3-201ENST00000296026 NEU2Q9Y3R4 380 aa18.57■□□□□ 0.56
CXCL3-201ENST00000296026 EIF3FO00303 357 aaPredicted RBP18.56■□□□□ 0.56
CXCL3-201ENST00000296026 NSA2O95478 260 aaKnown RBP18.56■□□□□ 0.56
CXCL3-201ENST00000296026 KCNK10P57789 538 aa18.56■□□□□ 0.56
CXCL3-201ENST00000296026 RPS15AP62244 130 aaKnown RBP18.56■□□□□ 0.56
CXCL3-201ENST00000296026 TBPL1P62380 186 aa18.56■□□□□ 0.56
CXCL3-201ENST00000296026 HSP90AA5PQ58FG0 334 aa18.56■□□□□ 0.56
CXCL3-201ENST00000296026 MFSD4BQ5TF39 518 aa18.56■□□□□ 0.56
CXCL3-201ENST00000296026 ABHD17BQ5VST6 288 aa18.56■□□□□ 0.56
CXCL3-201ENST00000296026 C1QL3Q5VWW1 255 aa18.56■□□□□ 0.56
CXCL3-201ENST00000296026 PRSS41Q7RTY9 318 aa18.56■□□□□ 0.56
CXCL3-201ENST00000296026 SHISA5Q8N114 240 aa18.56■□□□□ 0.56
CXCL3-201ENST00000296026 MCOLN3Q8TDD5 553 aa18.56■□□□□ 0.56
CXCL3-201ENST00000296026 MACROD1Q9BQ69 325 aa18.56■□□□□ 0.56
CXCL3-201ENST00000296026 VN1R1Q9GZP7 353 aa18.56■□□□□ 0.56
CXCL3-201ENST00000296026 RNF32Q9H0A6 362 aa18.56■□□□□ 0.56
CXCL3-201ENST00000296026 PPP2R2CQ9Y2T4 447 aa18.56■□□□□ 0.56
CXCL3-201ENST00000296026 KCNE1BA0A087WTH5 132 aa18.55■□□□□ 0.56
CXCL3-201ENST00000296026 IGHV3-20A0A0C4DH32 117 aa18.55■□□□□ 0.56
CXCL3-201ENST00000296026 IL1RNP18510 177 aa18.55■□□□□ 0.56
CXCL3-201ENST00000296026 CCZ1BP86790 482 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms