RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 PYROXD1Q8WU10 500 aa9.32□□□□□ -0.92
CCDC58-201ENST00000291458 EXT2Q93063 718 aa9.32□□□□□ -0.92
CCDC58-201ENST00000291458 LRRC39Q96DD0 335 aa9.32□□□□□ -0.92
CCDC58-201ENST00000291458 MMABQ96EY8 250 aaPredicted RBP9.32□□□□□ -0.92
CCDC58-201ENST00000291458 TSNARE1Q96NA8 513 aa9.32□□□□□ -0.92
CCDC58-201ENST00000291458 NUDT9Q9BW91 350 aa9.32□□□□□ -0.92
CCDC58-201ENST00000291458 RBCK1Q9BYM8 510 aa9.32□□□□□ -0.92
CCDC58-201ENST00000291458 CAB39LQ9H9S4 337 aa9.32□□□□□ -0.92
CCDC58-201ENST00000291458 SMYD2Q9NRG4 433 aa9.32□□□□□ -0.92
CCDC58-201ENST00000291458 P4HTMQ9NXG6 502 aa9.32□□□□□ -0.92
CCDC58-201ENST00000291458 ARL15Q9NXU5 204 aa9.32□□□□□ -0.92
CCDC58-201ENST00000291458 GPR83Q9NYM4 423 aa9.32□□□□□ -0.92
CCDC58-201ENST00000291458 GRHL1Q9NZI5 618 aa9.32□□□□□ -0.92
CCDC58-201ENST00000291458 KLHL42Q9P2K6 505 aa9.32□□□□□ -0.92
CCDC58-201ENST00000291458 GMPR2Q9P2T1 348 aaKnown RBP9.32□□□□□ -0.92
CCDC58-201ENST00000291458 FBXL4Q9UKA2 621 aa9.32□□□□□ -0.92
CCDC58-201ENST00000291458 G3BP2Q9UN86 482 aaKnown RBP9.32□□□□□ -0.92
CCDC58-201ENST00000291458 PLAAQ9Y263 795 aa9.32□□□□□ -0.92
CCDC58-201ENST00000291458 MRPS2Q9Y399 296 aaKnown RBP9.32□□□□□ -0.92
CCDC58-201ENST00000291458 SCN2AQ99250 2005 aa9.32□□□□□ -0.92
CCDC58-201ENST00000291458 A0A0A6YYC8 382 aaPredicted RBP9.31□□□□□ -0.92
CCDC58-201ENST00000291458 ZNF860A6NHJ4 632 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 I3L1I5 382 aaPredicted RBP9.31□□□□□ -0.92
CCDC58-201ENST00000291458 CDC7O00311 574 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 WISP1O95388 367 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 TSPAN12O95859 305 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 SERPIND1P05546 499 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 UQCRHP07919 91 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 ANXA5P08758 320 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 HIST1H2AGP0C0S8 130 aaPredicted RBP9.31□□□□□ -0.92
CCDC58-201ENST00000291458 PIM1P11309 404 aaPredicted RBP9.31□□□□□ -0.92
CCDC58-201ENST00000291458 EZRP15311 586 aaKnown RBP9.31□□□□□ -0.92
CCDC58-201ENST00000291458 IL1RNP18510 177 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 HIST1H2ADP20671 130 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 ITGA3P26006 1051 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 GMPRP36959 345 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 HSD17B2P37059 387 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 CASRP41180 1078 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 PLTPP55058 493 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 ETF1P62495 437 aaKnown RBP9.31□□□□□ -0.92
CCDC58-201ENST00000291458 SLC7A5Q01650 507 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 OCA2Q04671 838 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 EEF1A2Q05639 463 aaKnown RBP9.31□□□□□ -0.92
CCDC58-201ENST00000291458 PRDX1Q06830 199 aaKnown RBP9.31□□□□□ -0.92
CCDC58-201ENST00000291458 SSPNQ14714 243 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 EFTUD2Q15029 972 aaKnown RBP eCLIP9.31□□□□□ -0.92
CCDC58-201ENST00000291458 TRADDQ15628 312 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 NKG7Q16617 165 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 MUM1Q2TAK8 710 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 ZNF425Q6IV72 752 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 LRRC8EQ6NSJ5 796 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 FBXO42Q6P3S6 717 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 FRA10AC1Q70Z53 315 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 PRSS41Q7RTY9 318 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 ZC3HC1Q86WB0 502 aaKnown RBP9.31□□□□□ -0.92
CCDC58-201ENST00000291458 C17orf64Q86WR6 236 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 CTAGE3PQ8IX95 158 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 LRRC56Q8IYG6 542 aaPredicted RBP9.31□□□□□ -0.92
CCDC58-201ENST00000291458 SPATA6LQ8N4H0 392 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 CLEC1AQ8NC01 280 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 BBOF1Q8ND07 529 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 FKBP10Q96AY3 582 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 C8orf44Q96CB5 159 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 MRRFQ96E11 262 aaKnown RBP9.31□□□□□ -0.92
CCDC58-201ENST00000291458 VPS39Q96JC1 886 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 HIST1H2AHQ96KK5 128 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 CCDC138Q96M89 665 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 ZNF285Q96NJ3 590 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 HIST1H2AJQ99878 128 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 EGFL8Q99944 293 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 ERP44Q9BS26 406 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 H2AFJQ9BTM1 129 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 CRB3Q9BUF7 120 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 CLMPQ9H6B4 373 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 PARVBQ9HBI1 364 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 ZNF304Q9HCX3 659 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 HCN3Q9P1Z3 774 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 WHRNQ9P202 907 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 ANKMY1Q9P2S6 941 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 TRPC4Q9UBN4 977 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 RNF14Q9UBS8 474 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 ANAPC2Q9UJX6 822 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 VWA7Q9Y334 891 aa9.31□□□□□ -0.92
CCDC58-201ENST00000291458 UTP11Q9Y3A2 253 aaKnown RBP9.31□□□□□ -0.92
CCDC58-201ENST00000291458 TLN1Q9Y490 2541 aaKnown RBP9.31□□□□□ -0.92
CCDC58-201ENST00000291458 SMG1Q96Q15 3661 aaKnown RBP9.3□□□□□ -0.92
CCDC58-201ENST00000291458 FITM1A5D6W6 292 aa9.3□□□□□ -0.92
CCDC58-201ENST00000291458 NCF1BA6NI72 391 aaPredicted RBP9.3□□□□□ -0.92
CCDC58-201ENST00000291458 TTLL8A6PVC2 850 aa9.3□□□□□ -0.92
CCDC58-201ENST00000291458 NCF1CA8MVU1 366 aaPredicted RBP9.3□□□□□ -0.92
CCDC58-201ENST00000291458 CXorf49A8MYA2 514 aaPredicted RBP9.3□□□□□ -0.92
CCDC58-201ENST00000291458 E7ESA3 106 aa9.3□□□□□ -0.92
CCDC58-201ENST00000291458 EIF3FO00303 357 aaPredicted RBP9.3□□□□□ -0.92
CCDC58-201ENST00000291458 PHGDHO43175 533 aaKnown RBP9.3□□□□□ -0.92
CCDC58-201ENST00000291458 SRPX2O60687 465 aaPredicted RBP9.3□□□□□ -0.92
CCDC58-201ENST00000291458 URI1O94763 535 aaPredicted RBP9.3□□□□□ -0.92
CCDC58-201ENST00000291458 BMP2P12643 396 aa9.3□□□□□ -0.92
CCDC58-201ENST00000291458 NCF1P14598 390 aaPredicted RBP9.3□□□□□ -0.92
CCDC58-201ENST00000291458 ZNF37AP17032 561 aaPredicted RBP9.3□□□□□ -0.92
CCDC58-201ENST00000291458 BCL6P41182 706 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms