RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 DNAJA1P31689 397 aaKnown RBP15.39■□□□□ 0.05
SMAD6-201ENST00000288840 SLC16A1P53985 500 aa15.39■□□□□ 0.05
SMAD6-201ENST00000288840 TRIM71Q2Q1W2 868 aaKnown RBP15.39■□□□□ 0.05
SMAD6-201ENST00000288840 GPR65Q8IYL9 337 aa15.39■□□□□ 0.05
SMAD6-201ENST00000288840 ABHD11Q8NFV4 315 aa15.39■□□□□ 0.05
SMAD6-201ENST00000288840 ATL1Q8WXF7 558 aa15.39■□□□□ 0.05
SMAD6-201ENST00000288840 HDAC2Q92769 488 aaKnown RBP15.39■□□□□ 0.05
SMAD6-201ENST00000288840 ITFG2Q969R8 447 aa15.39■□□□□ 0.05
SMAD6-201ENST00000288840 KCNS3Q9BQ31 491 aa15.39■□□□□ 0.05
SMAD6-201ENST00000288840 SLC35A5Q9BS91 424 aa15.39■□□□□ 0.05
SMAD6-201ENST00000288840 TOR4AQ9NXH8 423 aa15.39■□□□□ 0.05
SMAD6-201ENST00000288840 PSMD11O00231 422 aa15.38■□□□□ 0.05
SMAD6-201ENST00000288840 EPHA2P29317 976 aa15.38■□□□□ 0.05
SMAD6-201ENST00000288840 DEFB103AP81534 67 aa15.38■□□□□ 0.05
SMAD6-201ENST00000288840 SRSF11Q05519 484 aaKnown RBP15.38■□□□□ 0.05
SMAD6-201ENST00000288840 CDK5R2Q13319 367 aa15.38■□□□□ 0.05
SMAD6-201ENST00000288840 MOGQ16653 247 aa15.38■□□□□ 0.05
SMAD6-201ENST00000288840 SLC8B1Q6J4K2 584 aa15.38■□□□□ 0.05
SMAD6-201ENST00000288840 CAPN13Q6MZZ7 669 aaPredicted RBP15.38■□□□□ 0.05
SMAD6-201ENST00000288840 BORAQ6PGQ7 559 aa15.38■□□□□ 0.05
SMAD6-201ENST00000288840 SLC34A3Q8N130 599 aa15.38■□□□□ 0.05
SMAD6-201ENST00000288840 CERS4Q9HA82 394 aa15.38■□□□□ 0.05
SMAD6-201ENST00000288840 EQTNQ9NQ60 294 aa15.38■□□□□ 0.05
SMAD6-201ENST00000288840 THG1LQ9NWX6 298 aaKnown RBP15.38■□□□□ 0.05
SMAD6-201ENST00000288840 TMEM98Q9Y2Y6 226 aa15.38■□□□□ 0.05
SMAD6-201ENST00000288840 MRPS23Q9Y3D9 190 aaKnown RBP15.38■□□□□ 0.05
SMAD6-201ENST00000288840 TET1Q8NFU7 2136 aa15.38■□□□□ 0.05
SMAD6-201ENST00000288840 RGPD3A6NKT7 1758 aaPredicted RBP15.38■□□□□ 0.05
SMAD6-201ENST00000288840 RGPD4Q7Z3J3 1758 aa15.38■□□□□ 0.05
SMAD6-201ENST00000288840 TCRBV5S2A0A599 114 aa15.38■□□□□ 0.05
SMAD6-201ENST00000288840 H3BNC9 293 aa15.38■□□□□ 0.05
SMAD6-201ENST00000288840 C1QCP02747 245 aa15.38■□□□□ 0.05
SMAD6-201ENST00000288840 PDHA2P29803 388 aa15.38■□□□□ 0.05
SMAD6-201ENST00000288840 PSMD8P48556 350 aa15.38■□□□□ 0.05
SMAD6-201ENST00000288840 TAS2R50P59544 299 aa15.38■□□□□ 0.05
SMAD6-201ENST00000288840 TPGS2Q68CL5 300 aa15.38■□□□□ 0.05
SMAD6-201ENST00000288840 MED27Q6P2C8 311 aa15.38■□□□□ 0.05
SMAD6-201ENST00000288840 OR9Q1Q8NGQ5 310 aa15.38■□□□□ 0.05
SMAD6-201ENST00000288840 SCRN2Q96FV2 425 aa15.38■□□□□ 0.05
SMAD6-201ENST00000288840 FAM210AQ96ND0 272 aa15.38■□□□□ 0.05
SMAD6-201ENST00000288840 HERC2P3Q9BVR0 1158 aa15.38■□□□□ 0.05
SMAD6-201ENST00000288840 OSBPL10Q9BXB5 764 aa15.38■□□□□ 0.05
SMAD6-201ENST00000288840 NLNQ9BYT8 704 aa15.38■□□□□ 0.05
SMAD6-201ENST00000288840 KAT8Q9H7Z6 458 aaKnown RBP15.38■□□□□ 0.05
SMAD6-201ENST00000288840 DCAF13Q9NV06 445 aaKnown RBP15.38■□□□□ 0.05
SMAD6-201ENST00000288840 EHD3Q9NZN3 535 aa15.38■□□□□ 0.05
SMAD6-201ENST00000288840 TRPS1Q9UHF7 1281 aa15.38■□□□□ 0.05
SMAD6-201ENST00000288840 TMEM202A6NGA9 273 aa15.38■□□□□ 0.05
SMAD6-201ENST00000288840 APOL3O95236 402 aa15.38■□□□□ 0.05
SMAD6-201ENST00000288840 VNN2O95498 520 aa15.38■□□□□ 0.05
SMAD6-201ENST00000288840 ADH1AP07327 375 aa15.38■□□□□ 0.05
SMAD6-201ENST00000288840 TGFBR1P36897 503 aa15.38■□□□□ 0.05
SMAD6-201ENST00000288840 CTSCP53634 463 aa15.38■□□□□ 0.05
SMAD6-201ENST00000288840 VLDLRP98155 873 aa15.38■□□□□ 0.05
SMAD6-201ENST00000288840 SLC13A2Q13183 592 aa15.38■□□□□ 0.05
SMAD6-201ENST00000288840 IRF5Q13568 498 aa15.38■□□□□ 0.05
SMAD6-201ENST00000288840 CATSPEREQ5SY80 951 aa15.38■□□□□ 0.05
SMAD6-201ENST00000288840 LGI4Q8N135 537 aa15.38■□□□□ 0.05
SMAD6-201ENST00000288840 NAGSQ8N159 534 aa15.38■□□□□ 0.05
SMAD6-201ENST00000288840 PDPRQ8NCN5 879 aa15.38■□□□□ 0.05
SMAD6-201ENST00000288840 OR10G2Q8NGC3 310 aa15.38■□□□□ 0.05
SMAD6-201ENST00000288840 NTN4Q9HB63 628 aa15.38■□□□□ 0.05
SMAD6-201ENST00000288840 ATAD3AQ9NVI7 634 aa15.38■□□□□ 0.05
SMAD6-201ENST00000288840 A0A096LPI6 279 aa15.37■□□□□ 0.05
SMAD6-201ENST00000288840 CSF2RAP15509 400 aa15.37■□□□□ 0.05
SMAD6-201ENST00000288840 HTR1BP28222 390 aa15.37■□□□□ 0.05
SMAD6-201ENST00000288840 C21orf33P30042 268 aaPredicted RBP15.37■□□□□ 0.05
SMAD6-201ENST00000288840 RUNX1T1Q06455 604 aa15.37■□□□□ 0.05
SMAD6-201ENST00000288840 CNTN1Q12860 1018 aa15.37■□□□□ 0.05
SMAD6-201ENST00000288840 EIF3MQ7L2H7 374 aaKnown RBP15.37■□□□□ 0.05
SMAD6-201ENST00000288840 WDR36Q8NI36 951 aaKnown RBP15.37■□□□□ 0.05
SMAD6-201ENST00000288840 TCEAL4Q96EI5 215 aa15.37■□□□□ 0.05
SMAD6-201ENST00000288840 FEVQ99581 238 aa15.37■□□□□ 0.05
SMAD6-201ENST00000288840 SORBS1Q9BX66 1292 aaKnown RBP15.37■□□□□ 0.05
SMAD6-201ENST00000288840 CACYBPQ9HB71 228 aaKnown RBP15.37■□□□□ 0.05
SMAD6-201ENST00000288840 RIMKLBQ9ULI2 386 aa15.37■□□□□ 0.05
SMAD6-201ENST00000288840 LHCGRP22888 699 aa15.37■□□□□ 0.05
SMAD6-201ENST00000288840 GRK3P35626 688 aa15.37■□□□□ 0.05
SMAD6-201ENST00000288840 SPINT3P49223 89 aa15.37■□□□□ 0.05
SMAD6-201ENST00000288840 EMX1Q04741 257 aaPredicted RBP15.37■□□□□ 0.05
SMAD6-201ENST00000288840 CTU2Q2VPK5 515 aaKnown RBP15.37■□□□□ 0.05
SMAD6-201ENST00000288840 ZSWIM9Q86XI8 627 aa15.37■□□□□ 0.05
SMAD6-201ENST00000288840 ZNF420Q8TAQ5 688 aaPredicted RBP15.37■□□□□ 0.05
SMAD6-201ENST00000288840 CMTM7Q96FZ5 175 aa15.37■□□□□ 0.05
SMAD6-201ENST00000288840 UHRF1Q96T88 793 aaPredicted RBP15.37■□□□□ 0.05
SMAD6-201ENST00000288840 DCSTAMPQ9H295 470 aa15.37■□□□□ 0.05
SMAD6-201ENST00000288840 AP3M1Q9Y2T2 418 aa15.37■□□□□ 0.05
SMAD6-201ENST00000288840 PLXNB2O15031 1838 aa15.37■□□□□ 0.05
SMAD6-201ENST00000288840 MICAL3Q7RTP6 2002 aa15.37■□□□□ 0.05
SMAD6-201ENST00000288840 GLOD5A6NK44 160 aa15.37■□□□□ 0.05
SMAD6-201ENST00000288840 MRPL58Q14197 206 aaKnown RBP15.37■□□□□ 0.05
SMAD6-201ENST00000288840 GAREM2Q75VX8 874 aa15.37■□□□□ 0.05
SMAD6-201ENST00000288840 HSD11B1LQ7Z5J1 315 aa15.37■□□□□ 0.05
SMAD6-201ENST00000288840 RNF130Q86XS8 419 aa15.37■□□□□ 0.05
SMAD6-201ENST00000288840 PTRH1Q86Y79 214 aaKnown RBP15.37■□□□□ 0.05
SMAD6-201ENST00000288840 DPP10Q8N608 796 aa15.37■□□□□ 0.05
SMAD6-201ENST00000288840 TBC1D15Q8TC07 691 aa15.37■□□□□ 0.05
SMAD6-201ENST00000288840 MBD1Q9UIS9 605 aaPredicted RBP15.37■□□□□ 0.05
SMAD6-201ENST00000288840 ARNTLO00327 626 aa15.36■□□□□ 0.05
SMAD6-201ENST00000288840 TGM5O43548 720 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms