RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 ZNF613Q6PF04 617 aa15.25■□□□□ 0.03
USP43-201ENST00000285199 RASSF6Q6ZTQ3 369 aa15.25■□□□□ 0.03
USP43-201ENST00000285199 TUBA1AQ71U36 451 aa15.25■□□□□ 0.03
USP43-201ENST00000285199 ZNF382Q96SR6 550 aa15.25■□□□□ 0.03
USP43-201ENST00000285199 SMOC2Q9H3U7 446 aa15.25■□□□□ 0.03
USP43-201ENST00000285199 PCDHGA4Q9Y5G9 962 aa15.25■□□□□ 0.03
USP43-201ENST00000285199 SLITRK5O94991 958 aa15.25■□□□□ 0.03
USP43-201ENST00000285199 PDYNP01213 254 aa15.25■□□□□ 0.03
USP43-201ENST00000285199 ALPLP05186 524 aa15.25■□□□□ 0.03
USP43-201ENST00000285199 ALPPL2P10696 532 aa15.25■□□□□ 0.03
USP43-201ENST00000285199 TCF3P15923 654 aa15.25■□□□□ 0.03
USP43-201ENST00000285199 PRPS1L1P21108 318 aa15.25■□□□□ 0.03
USP43-201ENST00000285199 SDC2P34741 201 aa15.25■□□□□ 0.03
USP43-201ENST00000285199 RPS26P62854 115 aaKnown RBP15.25■□□□□ 0.03
USP43-201ENST00000285199 SRSF11Q05519 484 aaKnown RBP15.25■□□□□ 0.03
USP43-201ENST00000285199 MTAPQ13126 283 aa15.25■□□□□ 0.03
USP43-201ENST00000285199 ZMYND11Q15326 602 aa15.25■□□□□ 0.03
USP43-201ENST00000285199 CRB2Q5IJ48 1285 aa15.25■□□□□ 0.03
USP43-201ENST00000285199 KANK2Q63ZY3 851 aa15.25■□□□□ 0.03
USP43-201ENST00000285199 CELF2-AS1Q8N7Q2 184 aa15.25■□□□□ 0.03
USP43-201ENST00000285199 SLC37A3Q8NCC5 494 aa15.25■□□□□ 0.03
USP43-201ENST00000285199 GPR78Q96P69 363 aa15.25■□□□□ 0.03
USP43-201ENST00000285199 TM9SF3Q9HD45 589 aa15.25■□□□□ 0.03
USP43-201ENST00000285199 TAS2R16Q9NYV7 291 aa15.25■□□□□ 0.03
USP43-201ENST00000285199 PCDHGB6Q9Y5F9 930 aa15.25■□□□□ 0.03
USP43-201ENST00000285199 ISM1B1AKI9 464 aa15.24■□□□□ 0.03
USP43-201ENST00000285199 RLN1P04808 185 aa15.24■□□□□ 0.03
USP43-201ENST00000285199 ACLYP53396 1101 aa15.24■□□□□ 0.03
USP43-201ENST00000285199 MLLT1Q03111 559 aaPredicted RBP15.24■□□□□ 0.03
USP43-201ENST00000285199 IER5LQ5T953 404 aa15.24■□□□□ 0.03
USP43-201ENST00000285199 PPP2R2DQ66LE6 453 aa15.24■□□□□ 0.03
USP43-201ENST00000285199 RAET1GQ6H3X3 334 aa15.24■□□□□ 0.03
USP43-201ENST00000285199 C22orf42Q6IC83 251 aa15.24■□□□□ 0.03
USP43-201ENST00000285199 ZNF730Q6ZMV8 503 aa15.24■□□□□ 0.03
USP43-201ENST00000285199 BEND7Q8N7W2 519 aaPredicted RBP15.24■□□□□ 0.03
USP43-201ENST00000285199 WRAP53Q9BUR4 548 aaKnown RBP15.24■□□□□ 0.03
USP43-201ENST00000285199 STARD7Q9NQZ5 370 aa15.24■□□□□ 0.03
USP43-201ENST00000285199 MKLN1Q9UL63 735 aa15.24■□□□□ 0.03
USP43-201ENST00000285199 KCNH4Q9UQ05 1017 aa15.24■□□□□ 0.03
USP43-201ENST00000285199 A0A1B0GVM2 712 aa15.24■□□□□ 0.03
USP43-201ENST00000285199 PCDH7O60245 1069 aa15.24■□□□□ 0.03
USP43-201ENST00000285199 KCNE1P15382 129 aa15.24■□□□□ 0.03
USP43-201ENST00000285199 AP2S1P53680 142 aaPredicted RBP15.24■□□□□ 0.03
USP43-201ENST00000285199 RAB8AP61006 207 aa15.24■□□□□ 0.03
USP43-201ENST00000285199 SERINC3Q13530 473 aa15.24■□□□□ 0.03
USP43-201ENST00000285199 VMACQ2NL98 169 aa15.24■□□□□ 0.03
USP43-201ENST00000285199 USP41Q3LFD5 358 aa15.24■□□□□ 0.03
USP43-201ENST00000285199 ARHGAP12Q8IWW6 846 aa15.24■□□□□ 0.03
USP43-201ENST00000285199 CCDC59Q9P031 241 aaKnown RBP15.24■□□□□ 0.03
USP43-201ENST00000285199 NLKQ9UBE8 527 aa15.24■□□□□ 0.03
USP43-201ENST00000285199 RP1L1Q8IWN7 2480 aaPredicted RBP15.24■□□□□ 0.03
USP43-201ENST00000285199 A0A1B0GVC2 190 aa15.24■□□□□ 0.03
USP43-201ENST00000285199 A6NIN4 97 aa15.24■□□□□ 0.03
USP43-201ENST00000285199 SLC5A8Q8N695 610 aa15.24■□□□□ 0.03
USP43-201ENST00000285199 OR9Q2Q8NGE9 314 aa15.24■□□□□ 0.03
USP43-201ENST00000285199 NFKBIZQ9BYH8 718 aa15.24■□□□□ 0.03
USP43-201ENST00000285199 CD300AQ9UGN4 299 aa15.24■□□□□ 0.03
USP43-201ENST00000285199 TLR4O00206 839 aa15.23■□□□□ 0.03
USP43-201ENST00000285199 SMAD9O15198 467 aaKnown RBP15.23■□□□□ 0.03
USP43-201ENST00000285199 ORC5O43913 435 aa15.23■□□□□ 0.03
USP43-201ENST00000285199 URODP06132 367 aa15.23■□□□□ 0.03
USP43-201ENST00000285199 CA5AP35218 305 aa15.23■□□□□ 0.03
USP43-201ENST00000285199 XKP51811 444 aa15.23■□□□□ 0.03
USP43-201ENST00000285199 ZNF280AP59817 542 aaPredicted RBP15.23■□□□□ 0.03
USP43-201ENST00000285199 MAP2K5Q13163 448 aa15.23■□□□□ 0.03
USP43-201ENST00000285199 PKDCCQ504Y2 493 aa15.23■□□□□ 0.03
USP43-201ENST00000285199 SHFQ7M4L6 423 aa15.23■□□□□ 0.03
USP43-201ENST00000285199 RHEBL1Q8TAI7 183 aa15.23■□□□□ 0.03
USP43-201ENST00000285199 BPIFB1Q8TDL5 484 aa15.23■□□□□ 0.03
USP43-201ENST00000285199 SLC32A1Q9H598 525 aa15.23■□□□□ 0.03
USP43-201ENST00000285199 FAM124BQ9H5Z6 455 aaPredicted RBP15.23■□□□□ 0.03
USP43-201ENST00000285199 ELAC1Q9H777 363 aaKnown RBP15.23■□□□□ 0.03
USP43-201ENST00000285199 ABCG2Q9UNQ0 655 aa15.23■□□□□ 0.03
USP43-201ENST00000285199 TRAV19A0A0A6YYK7 116 aa15.23■□□□□ 0.03
USP43-201ENST00000285199 A0A1B0GTL3 188 aa15.23■□□□□ 0.03
USP43-201ENST00000285199 GJA1P17302 382 aa15.23■□□□□ 0.03
USP43-201ENST00000285199 GNG2P59768 71 aa15.23■□□□□ 0.03
USP43-201ENST00000285199 PCBP1Q15365 356 aaKnown RBP eCLIP15.23■□□□□ 0.03
USP43-201ENST00000285199 ADPRMQ3LIE5 342 aa15.23■□□□□ 0.03
USP43-201ENST00000285199 C9orf64Q5T6V5 341 aa15.23■□□□□ 0.03
USP43-201ENST00000285199 PAQR9Q6ZVX9 377 aa15.23■□□□□ 0.03
USP43-201ENST00000285199 RNF44Q7L0R7 432 aa15.23■□□□□ 0.03
USP43-201ENST00000285199 MEX3DQ86XN8 651 aaKnown RBP15.23■□□□□ 0.03
USP43-201ENST00000285199 C3orf58Q8NDZ4 430 aa15.23■□□□□ 0.03
USP43-201ENST00000285199 SLC16A10Q8TF71 515 aa15.23■□□□□ 0.03
USP43-201ENST00000285199 FAM129BQ96TA1 746 aa15.23■□□□□ 0.03
USP43-201ENST00000285199 RHNO1Q9BSD3 238 aa15.23■□□□□ 0.03
USP43-201ENST00000285199 TUBB1Q9H4B7 451 aa15.23■□□□□ 0.03
USP43-201ENST00000285199 RNF167Q9H6Y7 350 aa15.23■□□□□ 0.03
USP43-201ENST00000285199 ABCB8Q9NUT2 735 aa15.23■□□□□ 0.03
USP43-201ENST00000285199 K7ERQ8 282 aa15.23■□□□□ 0.03
USP43-201ENST00000285199 BCHEP06276 602 aa15.23■□□□□ 0.03
USP43-201ENST00000285199 ZNF24P17028 368 aa15.23■□□□□ 0.03
USP43-201ENST00000285199 PPIBP23284 216 aaKnown RBP15.23■□□□□ 0.03
USP43-201ENST00000285199 BCL7AQ4VC05 210 aa15.23■□□□□ 0.03
USP43-201ENST00000285199 TMEM207Q6UWW9 146 aa15.23■□□□□ 0.03
USP43-201ENST00000285199 MARCH9Q86YJ5 346 aa15.23■□□□□ 0.03
USP43-201ENST00000285199 CDK20Q8IZL9 346 aa15.23■□□□□ 0.03
USP43-201ENST00000285199 L3HYPDHQ96EM0 354 aa15.23■□□□□ 0.03
USP43-201ENST00000285199 NECTIN3Q9NQS3 549 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms