RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 GPR149Q86SP6 731 aa17.74■□□□□ 0.43
PDLIM3-201ENST00000284767 PLPP6Q8IY26 295 aa17.74■□□□□ 0.43
PDLIM3-201ENST00000284767 GLB1L3Q8NCI6 653 aaPredicted RBP17.74■□□□□ 0.43
PDLIM3-201ENST00000284767 OR6Q1Q8NGQ2 317 aa17.74■□□□□ 0.43
PDLIM3-201ENST00000284767 YIPF6Q96EC8 236 aa17.74■□□□□ 0.43
PDLIM3-201ENST00000284767 REXO5Q96IC2 774 aaKnown RBP17.74■□□□□ 0.43
PDLIM3-201ENST00000284767 TMEFF2Q9UIK5 374 aaPredicted RBP17.74■□□□□ 0.43
PDLIM3-201ENST00000284767 UTS2RQ9UKP6 389 aa17.74■□□□□ 0.43
PDLIM3-201ENST00000284767 TMEM202A6NGA9 273 aa17.73■□□□□ 0.43
PDLIM3-201ENST00000284767 TOR1BO14657 336 aa17.73■□□□□ 0.43
PDLIM3-201ENST00000284767 NADKO95544 446 aaPredicted RBP17.73■□□□□ 0.43
PDLIM3-201ENST00000284767 ANGPTL1O95841 491 aa17.73■□□□□ 0.43
PDLIM3-201ENST00000284767 S100BP04271 92 aaPredicted RBP17.73■□□□□ 0.43
PDLIM3-201ENST00000284767 CYP2A6P11509 494 aaPredicted RBP17.73■□□□□ 0.43
PDLIM3-201ENST00000284767 ST8SIA6P61647 398 aa17.73■□□□□ 0.43
PDLIM3-201ENST00000284767 PLIN5Q00G26 463 aa17.73■□□□□ 0.43
PDLIM3-201ENST00000284767 KCNC3Q14003 757 aa17.73■□□□□ 0.43
PDLIM3-201ENST00000284767 PON2Q15165 354 aa17.73■□□□□ 0.43
PDLIM3-201ENST00000284767 FNDC3BQ53EP0 1204 aaKnown RBP17.73■□□□□ 0.43
PDLIM3-201ENST00000284767 PDE12Q6L8Q7 609 aaKnown RBP17.73■□□□□ 0.43
PDLIM3-201ENST00000284767 TMEM179BQ7Z7N9 219 aa17.73■□□□□ 0.43
PDLIM3-201ENST00000284767 MICU2Q8IYU8 434 aa17.73■□□□□ 0.43
PDLIM3-201ENST00000284767 MCOLN3Q8TDD5 553 aa17.73■□□□□ 0.43
PDLIM3-201ENST00000284767 WWOXQ9NZC7 414 aa17.73■□□□□ 0.43
PDLIM3-201ENST00000284767 ZNF232Q9UNY5 417 aa17.73■□□□□ 0.43
PDLIM3-201ENST00000284767 EIF3LQ9Y262 564 aaKnown RBP17.73■□□□□ 0.43
PDLIM3-201ENST00000284767 TPRKBQ9Y3C4 175 aa17.73■□□□□ 0.43
PDLIM3-201ENST00000284767 HSPE1-MOB4S4R3N1 261 aa17.73■□□□□ 0.43
PDLIM3-201ENST00000284767 OTCP00480 354 aa17.73■□□□□ 0.43
PDLIM3-201ENST00000284767 ATP1B2P14415 290 aaPredicted RBP17.73■□□□□ 0.43
PDLIM3-201ENST00000284767 JUNDP17535 347 aa17.73■□□□□ 0.43
PDLIM3-201ENST00000284767 IL5RAQ01344 420 aa17.73■□□□□ 0.43
PDLIM3-201ENST00000284767 MAD2L1Q13257 205 aaPredicted RBP17.73■□□□□ 0.43
PDLIM3-201ENST00000284767 ZXDCQ2QGD7 858 aaPredicted RBP17.73■□□□□ 0.43
PDLIM3-201ENST00000284767 ADCK1Q86TW2 530 aa17.73■□□□□ 0.43
PDLIM3-201ENST00000284767 NDNFQ8TB73 568 aa17.73■□□□□ 0.43
PDLIM3-201ENST00000284767 NUDT8Q8WV74 236 aa17.73■□□□□ 0.43
PDLIM3-201ENST00000284767 GLMNQ92990 594 aa17.73■□□□□ 0.43
PDLIM3-201ENST00000284767 EFHD2Q96C19 240 aaPredicted RBP17.73■□□□□ 0.43
PDLIM3-201ENST00000284767 IKZF5Q9H5V7 419 aa17.73■□□□□ 0.43
PDLIM3-201ENST00000284767 SFXN1Q9H9B4 322 aa17.73■□□□□ 0.43
PDLIM3-201ENST00000284767 KCTD5Q9NXV2 234 aa17.73■□□□□ 0.43
PDLIM3-201ENST00000284767 DEC1Q9P2X7 70 aa17.73■□□□□ 0.43
PDLIM3-201ENST00000284767 PRUNE2Q8WUY3 3088 aa17.72■□□□□ 0.43
PDLIM3-201ENST00000284767 FFAR3O14843 346 aa17.72■□□□□ 0.43
PDLIM3-201ENST00000284767 GPR42O15529 346 aa17.72■□□□□ 0.43
PDLIM3-201ENST00000284767 SGTAO43765 313 aa17.72■□□□□ 0.43
PDLIM3-201ENST00000284767 IL6P05231 212 aa17.72■□□□□ 0.43
PDLIM3-201ENST00000284767 OR56A5P0C7T3 313 aa17.72■□□□□ 0.43
PDLIM3-201ENST00000284767 BMP4P12644 408 aa17.72■□□□□ 0.43
PDLIM3-201ENST00000284767 ZNF30P17039 623 aa17.72■□□□□ 0.43
PDLIM3-201ENST00000284767 CXCR4P61073 352 aa17.72■□□□□ 0.43
PDLIM3-201ENST00000284767 ABRAXAS2Q15018 415 aa17.72■□□□□ 0.43
PDLIM3-201ENST00000284767 HIST2H2ACQ16777 129 aaPredicted RBP17.72■□□□□ 0.43
PDLIM3-201ENST00000284767 AAK1Q2M2I8 961 aa17.72■□□□□ 0.43
PDLIM3-201ENST00000284767 RUNDC3AQ59EK9 446 aa17.72■□□□□ 0.43
PDLIM3-201ENST00000284767 P2RY8Q86VZ1 359 aa17.72■□□□□ 0.43
PDLIM3-201ENST00000284767 CNIH3Q8TBE1 160 aa17.72■□□□□ 0.43
PDLIM3-201ENST00000284767 DYNC2LI1Q8TCX1 351 aa17.72■□□□□ 0.43
PDLIM3-201ENST00000284767 FOXJ1Q92949 421 aa17.72■□□□□ 0.43
PDLIM3-201ENST00000284767 FAM83CQ9BQN1 747 aa17.72■□□□□ 0.43
PDLIM3-201ENST00000284767 DUSP21Q9H596 190 aa17.72■□□□□ 0.43
PDLIM3-201ENST00000284767 RMND5AQ9H871 391 aa17.72■□□□□ 0.43
PDLIM3-201ENST00000284767 INVSQ9Y283 1065 aa17.72■□□□□ 0.43
PDLIM3-201ENST00000284767 SLC27A6Q9Y2P4 619 aa17.72■□□□□ 0.43
PDLIM3-201ENST00000284767 FAM220BPB1ANY3 271 aa17.72■□□□□ 0.43
PDLIM3-201ENST00000284767 AXIN1O15169 862 aa17.72■□□□□ 0.43
PDLIM3-201ENST00000284767 SPINT1O43278 529 aa17.72■□□□□ 0.43
PDLIM3-201ENST00000284767 SRPRAP08240 638 aaKnown RBP17.72■□□□□ 0.43
PDLIM3-201ENST00000284767 SLC2A4P14672 509 aa17.72■□□□□ 0.43
PDLIM3-201ENST00000284767 PRKACGP22612 351 aa17.72■□□□□ 0.43
PDLIM3-201ENST00000284767 FCARP24071 287 aa17.72■□□□□ 0.43
PDLIM3-201ENST00000284767 AOAHP28039 575 aa17.72■□□□□ 0.43
PDLIM3-201ENST00000284767 TRAF3Q13114 568 aa17.72■□□□□ 0.43
PDLIM3-201ENST00000284767 SYT6Q5T7P8 510 aaPredicted RBP17.72■□□□□ 0.43
PDLIM3-201ENST00000284767 HENMT1Q5T8I9 393 aaKnown RBP17.72■□□□□ 0.43
PDLIM3-201ENST00000284767 ATG9BQ674R7 924 aa17.72■□□□□ 0.43
PDLIM3-201ENST00000284767 LIPIQ6XZB0 460 aa17.72■□□□□ 0.43
PDLIM3-201ENST00000284767 CACUL1Q86Y37 369 aa17.72■□□□□ 0.43
PDLIM3-201ENST00000284767 LILRA3Q8N6C8 439 aaPredicted RBP17.72■□□□□ 0.43
PDLIM3-201ENST00000284767 ZNF300Q96RE9 604 aaPredicted RBP17.72■□□□□ 0.43
PDLIM3-201ENST00000284767 SLC25A37Q9NYZ2 338 aa17.72■□□□□ 0.43
PDLIM3-201ENST00000284767 CCL27Q9Y4X3 112 aa17.72■□□□□ 0.43
PDLIM3-201ENST00000284767 A0A1W2PQ67 120 aa17.71■□□□□ 0.43
PDLIM3-201ENST00000284767 TSPAN11A1L157 253 aa17.71■□□□□ 0.43
PDLIM3-201ENST00000284767 XPNPEP2O43895 674 aa17.71■□□□□ 0.43
PDLIM3-201ENST00000284767 CREG1O75629 220 aa17.71■□□□□ 0.43
PDLIM3-201ENST00000284767 RECQL5O94762 991 aaPredicted RBP17.71■□□□□ 0.43
PDLIM3-201ENST00000284767 EIF2S1P05198 315 aaKnown RBP17.71■□□□□ 0.43
PDLIM3-201ENST00000284767 POU2F2P09086 479 aa17.71■□□□□ 0.43
PDLIM3-201ENST00000284767 ELFN1P0C7U0 828 aa17.71■□□□□ 0.43
PDLIM3-201ENST00000284767 MMP12P39900 470 aa17.71■□□□□ 0.43
PDLIM3-201ENST00000284767 RPL38P63173 70 aaKnown RBP17.71■□□□□ 0.43
PDLIM3-201ENST00000284767 RAPSNQ13702 412 aa17.71■□□□□ 0.43
PDLIM3-201ENST00000284767 TTLL9Q3SXZ7 439 aa17.71■□□□□ 0.43
PDLIM3-201ENST00000284767 FAM174BQ3ZCQ3 159 aa17.71■□□□□ 0.43
PDLIM3-201ENST00000284767 PAGE2BQ5JRK9 111 aa17.71■□□□□ 0.43
PDLIM3-201ENST00000284767 PPP2R2DQ66LE6 453 aa17.71■□□□□ 0.43
PDLIM3-201ENST00000284767 MSRB3Q8IXL7 192 aa17.71■□□□□ 0.43
PDLIM3-201ENST00000284767 HPS1Q92902 700 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms