RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 TMEM236Q5W0B7 351 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 MSANTD1Q6ZTZ1 278 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 NANOGNBQ7Z5D8 188 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 HEATR4Q86WZ0 1026 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 MSRB3Q8IXL7 192 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.01□□□□□ -0.81
UPF3B-201ENST00000276201 FBXO30Q8TB52 745 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 CNIH3Q8TBE1 160 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 FRS2Q8WU20 508 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 RASSF5Q8WWW0 418 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 OTUB2Q96DC9 234 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 SLC39A13Q96H72 371 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 SERPINB11Q96P15 392 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 CPPED1Q9BRF8 314 aaPredicted RBP10.01□□□□□ -0.81
UPF3B-201ENST00000276201 ITPAQ9BY32 194 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 CCDC90BQ9GZT6 254 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 DCSTAMPQ9H295 470 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 CCDC177Q9NQR7 707 aaPredicted RBP10.01□□□□□ -0.81
UPF3B-201ENST00000276201 C1orf109Q9NX04 203 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 VPS51Q9UID3 782 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 LSM7Q9UK45 103 aaKnown RBP10.01□□□□□ -0.81
UPF3B-201ENST00000276201 MKLN1Q9UL63 735 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 EVPLLA8MZ36 301 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 CDC7O00311 574 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 SLC28A1O00337 649 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 WNT9AO14904 365 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 XPNPEP2O43895 674 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 VPS26AO75436 327 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 OR4F21O95013 312 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 SEMG1P04279 462 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 CHRNB1P11230 501 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 G6PDP11413 515 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 FPR1P21462 350 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 CORO1AP31146 461 aaKnown RBP10.01□□□□□ -0.81
UPF3B-201ENST00000276201 MAP2K4P45985 399 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 IST1P53990 364 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 NCS1P62166 190 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 SLC10A7Q0GE19 358 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 TRAF3Q13114 568 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 CAMK2BQ13554 666 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 TRIP4Q15650 581 aaPredicted RBP10.01□□□□□ -0.81
UPF3B-201ENST00000276201 PROX2Q3B8N5 592 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 FBXO43Q4G163 708 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 LY6G5CQ5SRR4 150 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 STEAP3Q658P3 488 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 C14orf80Q86SX3 495 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 GPSM1Q86YR5 675 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 SPNS2Q8IVW8 549 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 AMER2Q8N7J2 671 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 DTWD2Q8NBA8 298 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 PROX1Q92786 737 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 CDKN2AIPNLQ96HQ2 116 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 NEK6Q9HC98 313 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 FKBP14Q9NWM8 211 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 TRAPPC4Q9Y296 219 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 PKP3Q9Y446 797 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 KCTD3Q9Y597 815 aa10.01□□□□□ -0.81
UPF3B-201ENST00000276201 MYOFQ9NZM1 2061 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 A0A096LPI6 279 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 PNMA8CA0A1B0GUJ8 204 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 LOC110117498-PIK3R3F6TDL0 507 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 ADH1CP00326 375 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 IGLV3-27P01718 113 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 ADH5P11766 374 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 CD36P16671 472 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 OPRD1P41143 372 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 HK3P52790 923 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 YBEYP58557 167 aaPredicted RBP10□□□□□ -0.81
UPF3B-201ENST00000276201 DEFA1P59665 94 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 DEFA3P59666 94 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 PARP15Q460N3 678 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 TMEM196Q5HYL7 178 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 AGAP6Q5VW22 663 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 TTC23LQ6PF05 361 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 KDELC2Q7Z4H8 507 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 CYP4Z1Q86W10 505 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 TMEM25Q86YD3 366 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 HS3ST5Q8IZT8 346 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 PRSS33Q8NF86 280 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 IL17RDQ8NFM7 739 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 KBTBD8Q8NFY9 601 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 OR10A6Q8NH74 314 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 PSMA8Q8TAA3 256 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 SETD6Q8TBK2 473 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 PIK3R3Q92569 461 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 PLD4Q96BZ4 506 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 HMCESQ96FZ2 354 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 AGAP4Q96P64 663 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 TRIB3Q96RU7 358 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 CCDC32Q9BV29 185 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 ZYG11BQ9C0D3 744 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 CLMPQ9H6B4 373 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 RETREG1Q9H6L5 497 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 SP110Q9HB58 689 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 SPHK2Q9NRA0 654 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 GALPQ9UBC7 116 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 AGO1Q9UL18 857 aaKnown RBP10□□□□□ -0.81
UPF3B-201ENST00000276201 SAMD4AQ9UPU9 718 aaKnown RBP10□□□□□ -0.81
UPF3B-201ENST00000276201 TLR6Q9Y2C9 796 aa10□□□□□ -0.81
UPF3B-201ENST00000276201 HCN4Q9Y3Q4 1203 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms