RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 UBXN11Q5T124 520 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 SPATA5L1Q9BVQ7 753 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 TP63Q9H3D4 680 aaPredicted RBP11.23□□□□□ -0.61
VPS33A-201ENST00000267199 AIG1Q9NVV5 245 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 DHRS7Q9Y394 339 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 MTMR11A4FU01 709 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 ATG13O75143 517 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 ZNF648Q5T619 568 aaPredicted RBP11.23□□□□□ -0.61
VPS33A-201ENST00000267199 SMARCD3Q6STE5 483 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 ZNF598Q86UK7 904 aaKnown RBP11.23□□□□□ -0.61
VPS33A-201ENST00000267199 OOSP2Q86WS3 158 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 FAM217AQ8IXS0 508 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 KCNJ9Q92806 393 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 KCTD7Q96MP8 289 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 TMEM106CQ9BVX2 250 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 COMMD9Q9P000 198 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 RUVBL1Q9Y265 456 aaKnown RBP11.23□□□□□ -0.61
VPS33A-201ENST00000267199 PCDHGA8Q9Y5G5 932 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 SLX4Q8IY92 1834 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 ZNF26P17031 533 aaPredicted RBP11.22□□□□□ -0.61
VPS33A-201ENST00000267199 AFF1P51825 1210 aaKnown RBP11.22□□□□□ -0.61
VPS33A-201ENST00000267199 PSMD4P55036 377 aaKnown RBP11.22□□□□□ -0.61
VPS33A-201ENST00000267199 GPR17Q13304 367 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 LRP8Q14114 963 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 GRM2Q14416 872 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 GPR33Q49SQ1 333 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 MARCH8Q5T0T0 291 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 SPARTQ8N0X7 666 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 DTWD1Q8N5C7 304 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 RHEBL1Q8TAI7 183 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 C9orf43Q8TAL5 461 aaPredicted RBP11.22□□□□□ -0.61
VPS33A-201ENST00000267199 RDH12Q96NR8 316 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 MRPS23Q9Y3D9 190 aaKnown RBP11.22□□□□□ -0.61
VPS33A-201ENST00000267199 NHSL1Q5SYE7 1610 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 ECM29Q5VYK3 1845 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 FAM25EA8MYX2 175 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 SOCS7O14512 581 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 SLC9A3R1O14745 358 aaPredicted RBP11.22□□□□□ -0.61
VPS33A-201ENST00000267199 POP4O95707 220 aaKnown RBP11.22□□□□□ -0.61
VPS33A-201ENST00000267199 CXCL14O95715 111 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 PRSS56P0CW18 603 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 SPCS2Q15005 226 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 OR4D1Q15615 310 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 GTDC1Q4AE62 458 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 FBXO43Q4G163 708 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 ZNF697Q5TEC3 545 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 TXNDC8Q6A555 127 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 KIAA1161Q6NSJ0 714 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 ARMC6Q6NXE6 501 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 DNAJB7Q7Z6W7 309 aaPredicted RBP11.22□□□□□ -0.61
VPS33A-201ENST00000267199 CARM1Q86X55 608 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 TMEM102Q8N9M5 508 aaPredicted RBP11.22□□□□□ -0.61
VPS33A-201ENST00000267199 CXorf40AQ8TE69 158 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 UFD1Q92890 307 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 PSKH2Q96QS6 385 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 TPT1P8Q9HAU6 139 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 NLE1Q9NVX2 485 aaPredicted RBP11.22□□□□□ -0.61
VPS33A-201ENST00000267199 DNMT3AQ9Y6K1 912 aaPredicted RBP11.22□□□□□ -0.61
VPS33A-201ENST00000267199 EVPLQ92817 2033 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 A0A1W2PRG6 482 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 MID1O15344 667 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 KDM4BO94953 1096 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 GBAP04062 536 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 C8GP07360 202 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 CPN2P22792 545 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 RPL4P36578 427 aaKnown RBP11.22□□□□□ -0.61
VPS33A-201ENST00000267199 MAZP56270 477 aaKnown RBP11.22□□□□□ -0.61
VPS33A-201ENST00000267199 NFE2L1Q14494 772 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 ZDHHC20Q5W0Z9 365 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 DESI1Q6ICB0 168 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 CFAP206Q8IYR0 622 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 DTX3Q8N9I9 347 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 AQP11Q8NBQ7 271 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 TBC1D15Q8TC07 691 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 BPIFB1Q8TDL5 484 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 KHSRPQ92945 711 aaKnown RBP eCLIP11.22□□□□□ -0.61
VPS33A-201ENST00000267199 PGAP3Q96FM1 320 aaPredicted RBP11.22□□□□□ -0.61
VPS33A-201ENST00000267199 SCLYQ96I15 445 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 MS4A12Q9NXJ0 267 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 TMEM181Q9P2C4 612 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 SLC22A14Q9Y267 594 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 ZNF510Q9Y2H8 683 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 RPL36Q9Y3U8 105 aaKnown RBP11.22□□□□□ -0.61
VPS33A-201ENST00000267199 NUMBLQ9Y6R0 609 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 NUP205Q92621 2012 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 COL4A1P02462 1669 aa11.22□□□□□ -0.61
VPS33A-201ENST00000267199 GLI3P10071 1580 aa11.21□□□□□ -0.61
VPS33A-201ENST00000267199 C12orf71A8MTZ7 269 aa11.21□□□□□ -0.61
VPS33A-201ENST00000267199 TLR4O00206 839 aa11.21□□□□□ -0.61
VPS33A-201ENST00000267199 ZNF623O75123 536 aa11.21□□□□□ -0.61
VPS33A-201ENST00000267199 FUCA1P04066 466 aa11.21□□□□□ -0.61
VPS33A-201ENST00000267199 HTR6P50406 440 aa11.21□□□□□ -0.61
VPS33A-201ENST00000267199 MAB21L1Q13394 359 aa11.21□□□□□ -0.61
VPS33A-201ENST00000267199 ZNF655Q8N720 491 aaPredicted RBP11.21□□□□□ -0.61
VPS33A-201ENST00000267199 Q8N9G6 341 aaPredicted RBP11.21□□□□□ -0.61
VPS33A-201ENST00000267199 WDR48Q8TAF3 677 aa11.21□□□□□ -0.61
VPS33A-201ENST00000267199 C2orf15Q8WU43 125 aaKnown RBP11.21□□□□□ -0.61
VPS33A-201ENST00000267199 ACDQ96AP0 544 aa11.21□□□□□ -0.61
VPS33A-201ENST00000267199 C3orf30Q96M34 536 aa11.21□□□□□ -0.61
VPS33A-201ENST00000267199 DEFB118Q96PH6 123 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms