RNA–Protein interactions for RNA: ENST00000262901.4

SIM1-201, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 3,999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-201ENST00000262901 ZNF57Q68EA5 555 aaPredicted RBP9.28□□□□□ -0.92
SIM1-201ENST00000262901 CYP20A1Q6UW02 462 aa9.28□□□□□ -0.92
SIM1-201ENST00000262901 TSPYL5Q86VY4 417 aaPredicted RBP9.28□□□□□ -0.92
SIM1-201ENST00000262901 CILP2Q8IUL8 1156 aa9.28□□□□□ -0.92
SIM1-201ENST00000262901 ZBTB2Q8N680 514 aa9.28□□□□□ -0.92
SIM1-201ENST00000262901 VN1R2Q8NFZ6 395 aa9.28□□□□□ -0.92
SIM1-201ENST00000262901 SLC22A12Q96S37 553 aa9.28□□□□□ -0.92
SIM1-201ENST00000262901 HDHD2Q9H0R4 259 aa9.28□□□□□ -0.92
SIM1-201ENST00000262901 INTS7Q9NVH2 962 aaKnown RBP9.28□□□□□ -0.92
SIM1-201ENST00000262901 GDE1Q9NZC3 331 aa9.28□□□□□ -0.92
SIM1-201ENST00000262901 IFT80Q9P2H3 777 aaPredicted RBP9.28□□□□□ -0.92
SIM1-201ENST00000262901 ASF1AQ9Y294 204 aa9.28□□□□□ -0.92
SIM1-201ENST00000262901 WNT6Q9Y6F9 365 aa9.28□□□□□ -0.92
SIM1-201ENST00000262901 FPGTO14772 594 aa9.28□□□□□ -0.92
SIM1-201ENST00000262901 AXIN1O15169 862 aa9.28□□□□□ -0.92
SIM1-201ENST00000262901 FFAR2O15552 330 aa9.28□□□□□ -0.92
SIM1-201ENST00000262901 PRKD3O94806 890 aa9.28□□□□□ -0.92
SIM1-201ENST00000262901 DHRS4L1P0CG22 281 aa9.28□□□□□ -0.92
SIM1-201ENST00000262901 FEN1P39748 380 aaKnown RBP9.28□□□□□ -0.92
SIM1-201ENST00000262901 CDK9P50750 372 aaKnown RBP9.28□□□□□ -0.92
SIM1-201ENST00000262901 DGKEP52429 567 aa9.28□□□□□ -0.92
SIM1-201ENST00000262901 CDC42P60953 191 aa9.28□□□□□ -0.92
SIM1-201ENST00000262901 ERVK-8P63133 956 aa9.28□□□□□ -0.92
SIM1-201ENST00000262901 SYT16Q17RD7 645 aa9.28□□□□□ -0.92
SIM1-201ENST00000262901 CCNYL2Q5T2Q4 361 aa9.28□□□□□ -0.92
SIM1-201ENST00000262901 CPTPQ5TA50 214 aa9.28□□□□□ -0.92
SIM1-201ENST00000262901 TRIQKQ629K1 86 aa9.28□□□□□ -0.92
SIM1-201ENST00000262901 NANOGP8Q6NSW7 305 aa9.28□□□□□ -0.92
SIM1-201ENST00000262901 GPR153Q6NV75 609 aa9.28□□□□□ -0.92
SIM1-201ENST00000262901 ANKRD54Q6NXT1 300 aa9.28□□□□□ -0.92
SIM1-201ENST00000262901 PLBD1Q6P4A8 553 aa9.28□□□□□ -0.92
SIM1-201ENST00000262901 PGM2L1Q6PCE3 622 aa9.28□□□□□ -0.92
SIM1-201ENST00000262901 DEF8Q6ZN54 512 aa9.28□□□□□ -0.92
SIM1-201ENST00000262901 IDO2Q6ZQW0 420 aa9.28□□□□□ -0.92
SIM1-201ENST00000262901 HTR3DQ70Z44 454 aa9.28□□□□□ -0.92
SIM1-201ENST00000262901 ZDHHC21Q8IVQ6 265 aa9.28□□□□□ -0.92
SIM1-201ENST00000262901 TRIM48Q8IWZ4 208 aa9.28□□□□□ -0.92
SIM1-201ENST00000262901 VANGL1Q8TAA9 524 aaPredicted RBP9.28□□□□□ -0.92
SIM1-201ENST00000262901 SLC29A1Q99808 456 aa9.28□□□□□ -0.92
SIM1-201ENST00000262901 RHBGQ9H310 441 aa9.28□□□□□ -0.92
SIM1-201ENST00000262901 SGK2Q9HBY8 427 aa9.28□□□□□ -0.92
SIM1-201ENST00000262901 HOXC11O43248 304 aaPredicted RBP9.27□□□□□ -0.92
SIM1-201ENST00000262901 SCO1O75880 301 aa9.27□□□□□ -0.92
SIM1-201ENST00000262901 CDK14O94921 469 aa9.27□□□□□ -0.92
SIM1-201ENST00000262901 AZGP1P25311 298 aaKnown RBP9.27□□□□□ -0.92
SIM1-201ENST00000262901 FMO3P31513 532 aa9.27□□□□□ -0.92
SIM1-201ENST00000262901 GRB7Q14451 532 aa9.27□□□□□ -0.92
SIM1-201ENST00000262901 HERC3Q15034 1050 aa9.27□□□□□ -0.92
SIM1-201ENST00000262901 RFX4Q33E94 735 aa9.27□□□□□ -0.92
SIM1-201ENST00000262901 PLA2G4EQ3MJ16 856 aa9.27□□□□□ -0.92
SIM1-201ENST00000262901 FNDC3BQ53EP0 1204 aaKnown RBP9.27□□□□□ -0.92
SIM1-201ENST00000262901 ALG1LQ6GMV1 187 aa9.27□□□□□ -0.92
SIM1-201ENST00000262901 CHSY3Q70JA7 882 aa9.27□□□□□ -0.92
SIM1-201ENST00000262901 FBXL6Q8N531 539 aa9.27□□□□□ -0.92
SIM1-201ENST00000262901 ENKURQ8TC29 256 aa9.27□□□□□ -0.92
SIM1-201ENST00000262901 SERINC2Q96SA4 455 aa9.27□□□□□ -0.92
SIM1-201ENST00000262901 RBM4BQ9BQ04 359 aaKnown RBP9.27□□□□□ -0.92
SIM1-201ENST00000262901 RBM4Q9BWF3 364 aaKnown RBP9.27□□□□□ -0.92
SIM1-201ENST00000262901 LRRC3Q9BY71 257 aa9.27□□□□□ -0.92
SIM1-201ENST00000262901 ZCCHC2Q9C0B9 1178 aaKnown RBP9.27□□□□□ -0.92
SIM1-201ENST00000262901 MFSD1Q9H3U5 465 aa9.27□□□□□ -0.92
SIM1-201ENST00000262901 MARCH4Q9P2E8 410 aaPredicted RBP9.27□□□□□ -0.92
SIM1-201ENST00000262901 DEC1Q9P2X7 70 aa9.27□□□□□ -0.92
SIM1-201ENST00000262901 GTF2A1LQ9UNN4 478 aa9.27□□□□□ -0.92
SIM1-201ENST00000262901 MRPS7Q9Y2R9 242 aaKnown RBP9.27□□□□□ -0.92
SIM1-201ENST00000262901 FNDC1Q4ZHG4 1894 aaPredicted RBP9.27□□□□□ -0.93
SIM1-201ENST00000262901 A0A0D9SEW6 157 aa9.27□□□□□ -0.93
SIM1-201ENST00000262901 AQP12BA6NM10 295 aa9.27□□□□□ -0.93
SIM1-201ENST00000262901 CENPBD1B2RD01 187 aa9.27□□□□□ -0.93
SIM1-201ENST00000262901 TAF4O00268 1085 aa9.27□□□□□ -0.93
SIM1-201ENST00000262901 NDUFA2O43678 99 aa9.27□□□□□ -0.93
SIM1-201ENST00000262901 SNNO75324 88 aaPredicted RBP9.27□□□□□ -0.93
SIM1-201ENST00000262901 EIF2S1P05198 315 aaKnown RBP9.27□□□□□ -0.93
SIM1-201ENST00000262901 IL7RP16871 459 aa9.27□□□□□ -0.93
SIM1-201ENST00000262901 NOS3P29474 1203 aa9.27□□□□□ -0.93
SIM1-201ENST00000262901 GPR1P46091 355 aa9.27□□□□□ -0.93
SIM1-201ENST00000262901 ARSDP51689 593 aa9.27□□□□□ -0.93
SIM1-201ENST00000262901 GNG2P59768 71 aa9.27□□□□□ -0.93
SIM1-201ENST00000262901 MS4A2Q01362 244 aa9.27□□□□□ -0.93
SIM1-201ENST00000262901 CACNG1Q06432 222 aa9.27□□□□□ -0.93
SIM1-201ENST00000262901 SEMA3BQ13214 749 aa9.27□□□□□ -0.93
SIM1-201ENST00000262901 KRR1Q13601 381 aaKnown RBP9.27□□□□□ -0.93
SIM1-201ENST00000262901 SSPNQ14714 243 aa9.27□□□□□ -0.93
SIM1-201ENST00000262901 PDGFRLQ15198 375 aa9.27□□□□□ -0.93
SIM1-201ENST00000262901 ZNF789Q5FWF6 425 aa9.27□□□□□ -0.93
SIM1-201ENST00000262901 CERS6Q6ZMG9 384 aa9.27□□□□□ -0.93
SIM1-201ENST00000262901 MTSS1LQ765P7 747 aa9.27□□□□□ -0.93
SIM1-201ENST00000262901 GPR149Q86SP6 731 aa9.27□□□□□ -0.93
SIM1-201ENST00000262901 TMC8Q8IU68 726 aa9.27□□□□□ -0.93
SIM1-201ENST00000262901 CCDC28AQ8IWP9 274 aa9.27□□□□□ -0.93
SIM1-201ENST00000262901 AQP12AQ8IXF9 295 aa9.27□□□□□ -0.93
SIM1-201ENST00000262901 TMBIM1Q969X1 311 aa9.27□□□□□ -0.93
SIM1-201ENST00000262901 CHCHD6Q9BRQ6 235 aa9.27□□□□□ -0.93
SIM1-201ENST00000262901 TFB2MQ9H5Q4 396 aaKnown RBP9.27□□□□□ -0.93
SIM1-201ENST00000262901 KLHL28Q9NXS3 571 aa9.27□□□□□ -0.93
SIM1-201ENST00000262901 CDH7Q9ULB5 785 aa9.27□□□□□ -0.93
SIM1-201ENST00000262901 SAMD4AQ9UPU9 718 aaKnown RBP9.27□□□□□ -0.93
SIM1-201ENST00000262901 MAN2B2Q9Y2E5 1009 aa9.27□□□□□ -0.93
SIM1-201ENST00000262901 MAP4K5Q9Y4K4 846 aa9.27□□□□□ -0.93
SIM1-201ENST00000262901 PCDHB1Q9Y5F3 818 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms