RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 PCBD2Q9H0N5 130 aa11.63□□□□□ -0.55
TRAF4-202ENST00000262396 ANKHQ9HCJ1 492 aa11.63□□□□□ -0.55
TRAF4-202ENST00000262396 PRM3Q9NNZ6 103 aa11.63□□□□□ -0.55
TRAF4-202ENST00000262396 PPANQ9NQ55 473 aaKnown RBP11.63□□□□□ -0.55
TRAF4-202ENST00000262396 KLHL42Q9P2K6 505 aa11.63□□□□□ -0.55
TRAF4-202ENST00000262396 GALPQ9UBC7 116 aa11.63□□□□□ -0.55
TRAF4-202ENST00000262396 SPENQ96T58 3664 aaKnown RBP11.63□□□□□ -0.55
TRAF4-202ENST00000262396 SHANK1Q9Y566 2161 aa11.62□□□□□ -0.55
TRAF4-202ENST00000262396 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.62□□□□□ -0.55
TRAF4-202ENST00000262396 IGHV1-45A0A0A0MS14 117 aa11.62□□□□□ -0.55
TRAF4-202ENST00000262396 ARHGAP10A1A4S6 786 aa11.62□□□□□ -0.55
TRAF4-202ENST00000262396 E7ENX8 843 aa11.62□□□□□ -0.55
TRAF4-202ENST00000262396 MED26O95402 600 aa11.62□□□□□ -0.55
TRAF4-202ENST00000262396 SLC1A2P43004 574 aa11.62□□□□□ -0.55
TRAF4-202ENST00000262396 CLCN7P51798 805 aa11.62□□□□□ -0.55
TRAF4-202ENST00000262396 RPS15AP62244 130 aaKnown RBP11.62□□□□□ -0.55
TRAF4-202ENST00000262396 TAP2Q03519 686 aa11.62□□□□□ -0.55
TRAF4-202ENST00000262396 INAQ16352 499 aa11.62□□□□□ -0.55
TRAF4-202ENST00000262396 SYT16Q17RD7 645 aa11.62□□□□□ -0.55
TRAF4-202ENST00000262396 BTBD16Q32M84 506 aa11.62□□□□□ -0.55
TRAF4-202ENST00000262396 C1QL3Q5VWW1 255 aa11.62□□□□□ -0.55
TRAF4-202ENST00000262396 HIBCHQ6NVY1 386 aaPredicted RBP11.62□□□□□ -0.55
TRAF4-202ENST00000262396 RPUSD3Q6P087 351 aaKnown RBP11.62□□□□□ -0.55
TRAF4-202ENST00000262396 CCDC137Q6PK04 289 aaKnown RBP11.62□□□□□ -0.55
TRAF4-202ENST00000262396 TMEM207Q6UWW9 146 aa11.62□□□□□ -0.55
TRAF4-202ENST00000262396 SLC34A3Q8N130 599 aa11.62□□□□□ -0.55
TRAF4-202ENST00000262396 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.62□□□□□ -0.55
TRAF4-202ENST00000262396 ZCCHC10Q8TBK6 192 aa11.62□□□□□ -0.55
TRAF4-202ENST00000262396 ASB11Q8WXH4 323 aa11.62□□□□□ -0.55
TRAF4-202ENST00000262396 PBKQ96KB5 322 aa11.62□□□□□ -0.55
TRAF4-202ENST00000262396 OR2A5Q96R48 311 aa11.62□□□□□ -0.55
TRAF4-202ENST00000262396 TRIM54Q9BYV2 358 aa11.62□□□□□ -0.55
TRAF4-202ENST00000262396 IARS2Q9NSE4 1012 aaKnown RBP11.62□□□□□ -0.55
TRAF4-202ENST00000262396 TMEM184CQ9NVA4 438 aa11.62□□□□□ -0.55
TRAF4-202ENST00000262396 STMN3Q9NZ72 180 aa11.62□□□□□ -0.55
TRAF4-202ENST00000262396 DHRS7Q9Y394 339 aa11.62□□□□□ -0.55
TRAF4-202ENST00000262396 CCDC88CQ9P219 2028 aa11.62□□□□□ -0.55
TRAF4-202ENST00000262396 PCSK5Q92824 1860 aa11.61□□□□□ -0.55
TRAF4-202ENST00000262396 NOTCH2Q04721 2471 aa11.61□□□□□ -0.55
TRAF4-202ENST00000262396 PRRC2CQ9Y520 2896 aaKnown RBP11.61□□□□□ -0.55
TRAF4-202ENST00000262396 IGLV3-12A0A075B6K2 115 aa11.61□□□□□ -0.55
TRAF4-202ENST00000262396 WIPF3A6NGB9 483 aa11.61□□□□□ -0.55
TRAF4-202ENST00000262396 PRSS44E7EML9 344 aa11.61□□□□□ -0.55
TRAF4-202ENST00000262396 H0YIG0 161 aa11.61□□□□□ -0.55
TRAF4-202ENST00000262396 ZG16O60844 167 aa11.61□□□□□ -0.55
TRAF4-202ENST00000262396 SEC24DO94855 1032 aaPredicted RBP11.61□□□□□ -0.55
TRAF4-202ENST00000262396 MLYCDO95822 493 aa11.61□□□□□ -0.55
TRAF4-202ENST00000262396 SERPIND1P05546 499 aa11.61□□□□□ -0.55
TRAF4-202ENST00000262396 F7P08709 466 aaPredicted RBP11.61□□□□□ -0.55
TRAF4-202ENST00000262396 SLC35G6P0C7Q6 338 aa11.61□□□□□ -0.55
TRAF4-202ENST00000262396 ERGP11308 486 aa11.61□□□□□ -0.55
TRAF4-202ENST00000262396 SLC26A3P40879 764 aa11.61□□□□□ -0.55
TRAF4-202ENST00000262396 TNFSF10P50591 281 aa11.61□□□□□ -0.55
TRAF4-202ENST00000262396 KCNK10P57789 538 aa11.61□□□□□ -0.55
TRAF4-202ENST00000262396 SKP1P63208 163 aa11.61□□□□□ -0.55
TRAF4-202ENST00000262396 FAM53BQ14153 422 aa11.61□□□□□ -0.55
TRAF4-202ENST00000262396 GBX1Q14549 363 aa11.61□□□□□ -0.55
TRAF4-202ENST00000262396 HSP90AA5PQ58FG0 334 aa11.61□□□□□ -0.55
TRAF4-202ENST00000262396 ANKRD22Q5VYY1 191 aa11.61□□□□□ -0.55
TRAF4-202ENST00000262396 ZNF425Q6IV72 752 aa11.61□□□□□ -0.55
TRAF4-202ENST00000262396 PIWIL4Q7Z3Z4 852 aaKnown RBP11.61□□□□□ -0.55
TRAF4-202ENST00000262396 CAND1Q86VP6 1230 aaKnown RBP11.61□□□□□ -0.55
TRAF4-202ENST00000262396 FBXO15Q8NCQ5 510 aaPredicted RBP11.61□□□□□ -0.55
TRAF4-202ENST00000262396 MCUQ8NE86 351 aa11.61□□□□□ -0.55
TRAF4-202ENST00000262396 OR9A4Q8NGU2 314 aa11.61□□□□□ -0.55
TRAF4-202ENST00000262396 HAS2Q92819 552 aa11.61□□□□□ -0.55
TRAF4-202ENST00000262396 THAP11Q96EK4 314 aa11.61□□□□□ -0.55
TRAF4-202ENST00000262396 MOCOSQ96EN8 888 aa11.61□□□□□ -0.55
TRAF4-202ENST00000262396 CCDC138Q96M89 665 aa11.61□□□□□ -0.55
TRAF4-202ENST00000262396 SERPINB12Q96P63 405 aa11.61□□□□□ -0.55
TRAF4-202ENST00000262396 SLC30A3Q99726 388 aa11.61□□□□□ -0.55
TRAF4-202ENST00000262396 MESP1Q9BRJ9 268 aa11.61□□□□□ -0.55
TRAF4-202ENST00000262396 TRIM56Q9BRZ2 755 aaKnown RBP11.61□□□□□ -0.55
TRAF4-202ENST00000262396 TGIF2Q9GZN2 237 aa11.61□□□□□ -0.55
TRAF4-202ENST00000262396 ZNF700Q9H0M5 742 aa11.61□□□□□ -0.55
TRAF4-202ENST00000262396 KCNK13Q9HB14 408 aa11.61□□□□□ -0.55
TRAF4-202ENST00000262396 ENAMQ9NRM1 1142 aa11.61□□□□□ -0.55
TRAF4-202ENST00000262396 TAS2R13Q9NYV9 303 aa11.61□□□□□ -0.55
TRAF4-202ENST00000262396 HCN3Q9P1Z3 774 aa11.61□□□□□ -0.55
TRAF4-202ENST00000262396 COPG2Q9UBF2 871 aa11.61□□□□□ -0.55
TRAF4-202ENST00000262396 SEC14L3Q9UDX4 400 aa11.61□□□□□ -0.55
TRAF4-202ENST00000262396 ASIC3Q9UHC3 531 aa11.61□□□□□ -0.55
TRAF4-202ENST00000262396 SH3BGRL2Q9UJC5 107 aa11.61□□□□□ -0.55
TRAF4-202ENST00000262396 FBXO5Q9UKT4 447 aa11.61□□□□□ -0.55
TRAF4-202ENST00000262396 IGKV1-8A0A0C4DH67 115 aa11.6□□□□□ -0.55
TRAF4-202ENST00000262396 OR5H15A6NDH6 313 aa11.6□□□□□ -0.55
TRAF4-202ENST00000262396 FAM227AF5H4B4 570 aa11.6□□□□□ -0.55
TRAF4-202ENST00000262396 PGRMC1O00264 195 aaKnown RBP11.6□□□□□ -0.55
TRAF4-202ENST00000262396 HNRNPRO43390 633 aaKnown RBP11.6□□□□□ -0.55
TRAF4-202ENST00000262396 FOXS1O43638 330 aa11.6□□□□□ -0.55
TRAF4-202ENST00000262396 PRAMEF2O60811 474 aa11.6□□□□□ -0.55
TRAF4-202ENST00000262396 HAUS5O94927 633 aa11.6□□□□□ -0.55
TRAF4-202ENST00000262396 UNC5CO95185 931 aa11.6□□□□□ -0.55
TRAF4-202ENST00000262396 WDPCPO95876 746 aa11.6□□□□□ -0.55
TRAF4-202ENST00000262396 C8GP07360 202 aa11.6□□□□□ -0.55
TRAF4-202ENST00000262396 ITGAMP11215 1152 aa11.6□□□□□ -0.55
TRAF4-202ENST00000262396 ESRRAP11474 423 aaPredicted RBP11.6□□□□□ -0.55
TRAF4-202ENST00000262396 IL1RNP18510 177 aa11.6□□□□□ -0.55
TRAF4-202ENST00000262396 CCND1P24385 295 aa11.6□□□□□ -0.55
TRAF4-202ENST00000262396 IMPA1P29218 277 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms