RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 NTMT1Q9BV86 223 aa19.87■□□□□ 0.77
RTCA-201ENST00000260563 SLC6A20Q9NP91 592 aa19.87■□□□□ 0.77
RTCA-201ENST00000260563 GPRC5BQ9NZH0 403 aa19.87■□□□□ 0.77
RTCA-201ENST00000260563 BTRCQ9Y297 605 aa19.87■□□□□ 0.77
RTCA-201ENST00000260563 AGRPO00253 132 aa19.86■□□□□ 0.77
RTCA-201ENST00000260563 HYAL3O43820 417 aaPredicted RBP19.86■□□□□ 0.77
RTCA-201ENST00000260563 TROVE2P10155 538 aaKnown RBP eCLIP19.86■□□□□ 0.77
RTCA-201ENST00000260563 NPPBP16860 134 aa19.86■□□□□ 0.77
RTCA-201ENST00000260563 NELFEP18615 380 aaKnown RBP19.86■□□□□ 0.77
RTCA-201ENST00000260563 GRIA3P42263 894 aa19.86■□□□□ 0.77
RTCA-201ENST00000260563 YBX1P67809 324 aaKnown RBP19.86■□□□□ 0.77
RTCA-201ENST00000260563 HSD11B2P80365 405 aa19.86■□□□□ 0.77
RTCA-201ENST00000260563 TRAF3Q13114 568 aa19.86■□□□□ 0.77
RTCA-201ENST00000260563 EIF3IQ13347 325 aaKnown RBP19.86■□□□□ 0.77
RTCA-201ENST00000260563 WDR75Q8IWA0 830 aaKnown RBP19.86■□□□□ 0.77
RTCA-201ENST00000260563 SLC5A11Q8WWX8 675 aa19.86■□□□□ 0.77
RTCA-201ENST00000260563 SLC41A2Q96JW4 573 aa19.86■□□□□ 0.77
RTCA-201ENST00000260563 CDK15Q96Q40 435 aa19.86■□□□□ 0.77
RTCA-201ENST00000260563 DPH7Q9BTV6 452 aa19.86■□□□□ 0.77
RTCA-201ENST00000260563 TRIM55Q9BYV6 548 aa19.86■□□□□ 0.77
RTCA-201ENST00000260563 PDE7BQ9NP56 450 aa19.86■□□□□ 0.77
RTCA-201ENST00000260563 TNFRSF12AQ9NP84 129 aa19.86■□□□□ 0.77
RTCA-201ENST00000260563 CUEDC1Q9NWM3 386 aaPredicted RBP19.86■□□□□ 0.77
RTCA-201ENST00000260563 ANKMY1Q9P2S6 941 aa19.86■□□□□ 0.77
RTCA-201ENST00000260563 ZNF225Q9UK10 706 aa19.86■□□□□ 0.77
RTCA-201ENST00000260563 SH2B3Q9UQQ2 575 aa19.86■□□□□ 0.77
RTCA-201ENST00000260563 KLHL20Q9Y2M5 609 aa19.86■□□□□ 0.77
RTCA-201ENST00000260563 KCNE2Q9Y6J6 123 aa19.86■□□□□ 0.77
RTCA-201ENST00000260563 CCDC187A0A096LP49 1063 aa19.86■□□□□ 0.77
RTCA-201ENST00000260563 FGF4P08620 206 aa19.86■□□□□ 0.77
RTCA-201ENST00000260563 EBLN1P0CF75 366 aa19.86■□□□□ 0.77
RTCA-201ENST00000260563 HK2P52789 917 aa19.86■□□□□ 0.77
RTCA-201ENST00000260563 ERVPABLB-1P60509 514 aa19.86■□□□□ 0.77
RTCA-201ENST00000260563 FIGLAQ6QHK4 219 aa19.86■□□□□ 0.77
RTCA-201ENST00000260563 ADCK2Q7Z695 626 aa19.86■□□□□ 0.77
RTCA-201ENST00000260563 MILR1Q7Z6M3 343 aa19.86■□□□□ 0.77
RTCA-201ENST00000260563 FAM129CQ86XR2 697 aa19.86■□□□□ 0.77
RTCA-201ENST00000260563 OR4F6Q8NGB9 312 aa19.86■□□□□ 0.77
RTCA-201ENST00000260563 BCAS4Q8TDM0 211 aa19.86■□□□□ 0.77
RTCA-201ENST00000260563 ZUFSPQ96AP4 578 aa19.86■□□□□ 0.77
RTCA-201ENST00000260563 THOC1Q96FV9 657 aaKnown RBP19.86■□□□□ 0.77
RTCA-201ENST00000260563 TCTN2Q96GX1 697 aa19.86■□□□□ 0.77
RTCA-201ENST00000260563 ELAC2Q9BQ52 826 aaKnown RBP19.86■□□□□ 0.77
RTCA-201ENST00000260563 NPHS2Q9NP85 383 aa19.86■□□□□ 0.77
RTCA-201ENST00000260563 LOXL2Q9Y4K0 774 aa19.86■□□□□ 0.77
RTCA-201ENST00000260563 TRAF6Q9Y4K3 522 aa19.86■□□□□ 0.77
RTCA-201ENST00000260563 KLK4Q9Y5K2 254 aa19.86■□□□□ 0.77
RTCA-201ENST00000260563 WDFY3Q8IZQ1 3526 aa19.85■□□□□ 0.77
RTCA-201ENST00000260563 IGKV1-8A0A0C4DH67 115 aa19.85■□□□□ 0.77
RTCA-201ENST00000260563 TMEM233B4DJY2 109 aa19.85■□□□□ 0.77
RTCA-201ENST00000260563 CLGNO14967 610 aa19.85■□□□□ 0.77
RTCA-201ENST00000260563 AZIN1O14977 448 aa19.85■□□□□ 0.77
RTCA-201ENST00000260563 CRCPO75575 148 aa19.85■□□□□ 0.77
RTCA-201ENST00000260563 OR4F21O95013 312 aa19.85■□□□□ 0.77
RTCA-201ENST00000260563 CDH1P12830 882 aa19.85■□□□□ 0.77
RTCA-201ENST00000260563 TMTC4Q5T4D3 741 aa19.85■□□□□ 0.77
RTCA-201ENST00000260563 LETMD1Q6P1Q0 360 aa19.85■□□□□ 0.77
RTCA-201ENST00000260563 RAB11FIP2Q7L804 512 aa19.85■□□□□ 0.77
RTCA-201ENST00000260563 TMPRSS11BQ86T26 416 aa19.85■□□□□ 0.77
RTCA-201ENST00000260563 CLYBLQ8N0X4 340 aa19.85■□□□□ 0.77
RTCA-201ENST00000260563 D2HGDHQ8N465 521 aa19.85■□□□□ 0.77
RTCA-201ENST00000260563 AFAP1L2Q8N4X5 818 aa19.85■□□□□ 0.77
RTCA-201ENST00000260563 NEIL2Q969S2 332 aa19.85■□□□□ 0.77
RTCA-201ENST00000260563 ACTR8Q9H981 624 aa19.85■□□□□ 0.77
RTCA-201ENST00000260563 FIS1Q9Y3D6 152 aa19.85■□□□□ 0.77
RTCA-201ENST00000260563 KNTC1P50748 2209 aa19.84■□□□□ 0.77
RTCA-201ENST00000260563 EFCAB7A8K855 629 aa19.84■□□□□ 0.77
RTCA-201ENST00000260563 E7EQ34 232 aa19.84■□□□□ 0.77
RTCA-201ENST00000260563 SLCO1B7G3V0H7 640 aa19.84■□□□□ 0.77
RTCA-201ENST00000260563 CLDN9O95484 217 aa19.84■□□□□ 0.77
RTCA-201ENST00000260563 GNAZP19086 355 aa19.84■□□□□ 0.77
RTCA-201ENST00000260563 HRH2P25021 359 aa19.84■□□□□ 0.77
RTCA-201ENST00000260563 FOXA1P55317 472 aa19.84■□□□□ 0.77
RTCA-201ENST00000260563 ZIC1Q15915 447 aa19.84■□□□□ 0.77
RTCA-201ENST00000260563 C3orf38Q5JPI3 329 aa19.84■□□□□ 0.77
RTCA-201ENST00000260563 KANK2Q63ZY3 851 aa19.84■□□□□ 0.77
RTCA-201ENST00000260563 FCRL6Q6DN72 434 aa19.84■□□□□ 0.77
RTCA-201ENST00000260563 CLEC6AQ6EIG7 209 aa19.84■□□□□ 0.77
RTCA-201ENST00000260563 SPATA21Q7Z572 469 aa19.84■□□□□ 0.77
RTCA-201ENST00000260563 MARCH9Q86YJ5 346 aa19.84■□□□□ 0.77
RTCA-201ENST00000260563 WDR36Q8NI36 951 aaKnown RBP19.84■□□□□ 0.77
RTCA-201ENST00000260563 ZNF473Q8WTR7 871 aaKnown RBP19.84■□□□□ 0.77
RTCA-201ENST00000260563 FAR2Q96K12 515 aa19.84■□□□□ 0.77
RTCA-201ENST00000260563 KCNA7Q96RP8 456 aa19.84■□□□□ 0.77
RTCA-201ENST00000260563 PLCD4Q9BRC7 762 aa19.84■□□□□ 0.77
RTCA-201ENST00000260563 SIKE1Q9BRV8 207 aa19.84■□□□□ 0.77
RTCA-201ENST00000260563 KLHL14Q9P2G3 628 aa19.84■□□□□ 0.77
RTCA-201ENST00000260563 TRPS1Q9UHF7 1281 aa19.84■□□□□ 0.77
RTCA-201ENST00000260563 SNX7Q9UNH6 387 aa19.84■□□□□ 0.77
RTCA-201ENST00000260563 USH1CQ9Y6N9 552 aa19.84■□□□□ 0.77
RTCA-201ENST00000260563 OR2A25A4D2G3 310 aa19.83■□□□□ 0.77
RTCA-201ENST00000260563 H7BY64 318 aa19.83■□□□□ 0.77
RTCA-201ENST00000260563 NDUFAB1O14561 156 aa19.83■□□□□ 0.77
RTCA-201ENST00000260563 SNX3O60493 162 aa19.83■□□□□ 0.77
RTCA-201ENST00000260563 UGDHO60701 494 aa19.83■□□□□ 0.77
RTCA-201ENST00000260563 PRAMEF10O60809 474 aa19.83■□□□□ 0.77
RTCA-201ENST00000260563 ENO1P06733 434 aaKnown RBP19.83■□□□□ 0.77
RTCA-201ENST00000260563 HGFP14210 728 aa19.83■□□□□ 0.77
RTCA-201ENST00000260563 IRF8Q02556 426 aa19.83■□□□□ 0.77
RTCA-201ENST00000260563 PCDH1Q08174 1060 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms