RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 TOMM20Q15388 145 aa9.49□□□□□ -0.89
CTDSPL2-201ENST00000260327 RFTN2Q52LD8 501 aaPredicted RBP9.49□□□□□ -0.89
CTDSPL2-201ENST00000260327 CHADLQ6NUI6 762 aa9.49□□□□□ -0.89
CTDSPL2-201ENST00000260327 MSANTD1Q6ZTZ1 278 aa9.49□□□□□ -0.89
CTDSPL2-201ENST00000260327 KIF18BQ86Y91 864 aa9.49□□□□□ -0.89
CTDSPL2-201ENST00000260327 SIAH1Q8IUQ4 282 aa9.49□□□□□ -0.89
CTDSPL2-201ENST00000260327 OR6K6Q8NGW6 343 aa9.49□□□□□ -0.89
CTDSPL2-201ENST00000260327 SLC35F5Q8WV83 523 aa9.49□□□□□ -0.89
CTDSPL2-201ENST00000260327 TRPS1Q9UHF7 1281 aa9.49□□□□□ -0.89
CTDSPL2-201ENST00000260327 NOP16Q9Y3C1 178 aaKnown RBP9.49□□□□□ -0.89
CTDSPL2-201ENST00000260327 KCTD3Q9Y597 815 aa9.49□□□□□ -0.89
CTDSPL2-201ENST00000260327 H0YAE9 185 aa9.49□□□□□ -0.89
CTDSPL2-201ENST00000260327 TEX46H3BTG2 121 aa9.49□□□□□ -0.89
CTDSPL2-201ENST00000260327 CDC7O00311 574 aa9.49□□□□□ -0.89
CTDSPL2-201ENST00000260327 C22orf31O95567 290 aa9.49□□□□□ -0.89
CTDSPL2-201ENST00000260327 RPL10P27635 214 aaKnown RBP9.49□□□□□ -0.89
CTDSPL2-201ENST00000260327 SPAM1P38567 509 aa9.49□□□□□ -0.89
CTDSPL2-201ENST00000260327 MLLT10P55197 1068 aa9.49□□□□□ -0.89
CTDSPL2-201ENST00000260327 FOXM1Q08050 763 aa9.49□□□□□ -0.89
CTDSPL2-201ENST00000260327 TMEM80Q96HE8 168 aa9.49□□□□□ -0.89
CTDSPL2-201ENST00000260327 YIPF4Q9BSR8 244 aa9.49□□□□□ -0.89
CTDSPL2-201ENST00000260327 TTTY10Q9BZA0 68 aa9.49□□□□□ -0.89
CTDSPL2-201ENST00000260327 MMP28Q9H239 520 aa9.49□□□□□ -0.89
CTDSPL2-201ENST00000260327 EXO5Q9H790 373 aa9.49□□□□□ -0.89
CTDSPL2-201ENST00000260327 TMEM27Q9HBJ8 222 aa9.49□□□□□ -0.89
CTDSPL2-201ENST00000260327 CCM2LQ9NUG4 571 aaPredicted RBP9.49□□□□□ -0.89
CTDSPL2-201ENST00000260327 ZNF214Q9UL59 606 aaPredicted RBP9.49□□□□□ -0.89
CTDSPL2-201ENST00000260327 ANKRD12Q6UB98 2062 aa9.49□□□□□ -0.89
CTDSPL2-201ENST00000260327 J3KR12 359 aa9.49□□□□□ -0.89
CTDSPL2-201ENST00000260327 ARVCFO00192 962 aa9.49□□□□□ -0.89
CTDSPL2-201ENST00000260327 STBD1O95210 358 aa9.49□□□□□ -0.89
CTDSPL2-201ENST00000260327 IL1BP01584 269 aa9.49□□□□□ -0.89
CTDSPL2-201ENST00000260327 ANXA3P12429 323 aa9.49□□□□□ -0.89
CTDSPL2-201ENST00000260327 VAMP1P23763 118 aa9.49□□□□□ -0.89
CTDSPL2-201ENST00000260327 ITPKBP27987 946 aa9.49□□□□□ -0.89
CTDSPL2-201ENST00000260327 RBM34P42696 430 aaKnown RBP9.49□□□□□ -0.89
CTDSPL2-201ENST00000260327 ARCN1P48444 511 aaKnown RBP9.49□□□□□ -0.89
CTDSPL2-201ENST00000260327 YBEYP58557 167 aaPredicted RBP9.49□□□□□ -0.89
CTDSPL2-201ENST00000260327 LARS2Q15031 903 aaKnown RBP9.49□□□□□ -0.89
CTDSPL2-201ENST00000260327 LRRC73Q5JTD7 316 aa9.49□□□□□ -0.89
CTDSPL2-201ENST00000260327 SIRPB2Q5JXA9 342 aa9.49□□□□□ -0.89
CTDSPL2-201ENST00000260327 ATXN7L2Q5T6C5 722 aaPredicted RBP9.49□□□□□ -0.89
CTDSPL2-201ENST00000260327 ZNF563Q8TA94 476 aa9.49□□□□□ -0.89
CTDSPL2-201ENST00000260327 BCO2Q9BYV7 579 aa9.49□□□□□ -0.89
CTDSPL2-201ENST00000260327 MTMR10Q9NXD2 777 aa9.49□□□□□ -0.89
CTDSPL2-201ENST00000260327 CEPT1Q9Y6K0 416 aa9.49□□□□□ -0.89
CTDSPL2-201ENST00000260327 PDCD5O14737 125 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 F8A1P23610 371 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 PPP5CP53041 499 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 DIO3P55073 304 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 PTPRCAPQ14761 206 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 PSD4Q8NDX1 1056 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 TRIM2Q9C040 744 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 RANBP3Q9H6Z4 567 aaPredicted RBP9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 METTL8Q9H825 291 aaKnown RBP9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 TPT1P8Q9HAU6 139 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 NUFIP1Q9UHK0 495 aaKnown RBP9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 PLEKHA6Q9Y2H5 1048 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 GPSM3Q9Y4H4 160 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 DNMT3AQ9Y6K1 912 aaPredicted RBP9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 TRAV19A0A0A6YYK7 116 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 J3QLW9 94 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 RB1P06400 928 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 ZNF19P17023 458 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 CREB5Q02930 508 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 SP140Q13342 867 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 ZNF311Q5JNZ3 666 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 CERS6Q6ZMG9 384 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 KCTD9Q7L273 389 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 CXorf40AQ8TE69 158 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 CCDC107Q8WV48 283 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 NPLQ9BXD5 320 aaPredicted RBP9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 ZIM2Q9NZV7 527 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 ZNF451Q9Y4E5 1061 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 NUAK1O60285 661 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 ELFN1P0C7U0 828 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 PGAM2P15259 253 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 PTNP21246 168 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 S100A12P80511 92 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 IL10RBQ08334 325 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 KCNJ8Q15842 424 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 MED27Q6P2C8 311 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 CMTR2Q8IYT2 770 aaKnown RBP9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 WDTC1Q8N5D0 677 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 SPPL2BQ8TCT7 592 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 ACBD6Q9BR61 282 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 SPATA9Q9BWV2 254 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 PTGDR2Q9Y5Y4 395 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 A0A1W2PRQ8 180 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 GM2AP17900 193 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 OR1E2P47887 323 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 KLHL26Q53HC5 615 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 RAB6CQ53S08 254 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 CDKL4Q5MAI5 379 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 SPANXN4Q5MJ08 99 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 NANOGP8Q6NSW7 305 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 CGB2Q6NT52 195 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 C17orf64Q86WR6 236 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 GALNT11Q8NCW6 608 aa9.48□□□□□ -0.89
CTDSPL2-201ENST00000260327 TMIEQ8NEW7 156 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms