RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 T-ENOLP0DO92 83 aa16.09■□□□□ 0.17
SDCBP-201ENST00000260130 ITPKBP27987 946 aa16.09■□□□□ 0.17
SDCBP-201ENST00000260130 PTPN4P29074 926 aa16.09■□□□□ 0.17
SDCBP-201ENST00000260130 SLC26A3P40879 764 aa16.09■□□□□ 0.17
SDCBP-201ENST00000260130 TBPL1P62380 186 aa16.09■□□□□ 0.17
SDCBP-201ENST00000260130 ABATP80404 500 aa16.09■□□□□ 0.17
SDCBP-201ENST00000260130 NAE1Q13564 534 aa16.09■□□□□ 0.17
SDCBP-201ENST00000260130 TIPARPQ7Z3E1 657 aaKnown RBP16.09■□□□□ 0.17
SDCBP-201ENST00000260130 BANPQ8N9N5 519 aa16.09■□□□□ 0.17
SDCBP-201ENST00000260130 NKD1Q969G9 470 aa16.09■□□□□ 0.17
SDCBP-201ENST00000260130 FBXL8Q96CD0 374 aa16.09■□□□□ 0.17
SDCBP-201ENST00000260130 SLC7A6OSQ96CW6 309 aaPredicted RBP16.09■□□□□ 0.17
SDCBP-201ENST00000260130 RNF31Q96EP0 1072 aa16.09■□□□□ 0.17
SDCBP-201ENST00000260130 MED8Q96G25 268 aa16.09■□□□□ 0.17
SDCBP-201ENST00000260130 ZNF570Q96NI8 536 aa16.09■□□□□ 0.17
SDCBP-201ENST00000260130 DPH7Q9BTV6 452 aa16.09■□□□□ 0.17
SDCBP-201ENST00000260130 PCBD2Q9H0N5 130 aa16.09■□□□□ 0.17
SDCBP-201ENST00000260130 NPHS2Q9NP85 383 aa16.09■□□□□ 0.17
SDCBP-201ENST00000260130 SNX15Q9NRS6 342 aa16.09■□□□□ 0.17
SDCBP-201ENST00000260130 WDR70Q9NW82 654 aa16.09■□□□□ 0.17
SDCBP-201ENST00000260130 TLK1Q9UKI8 766 aa16.09■□□□□ 0.17
SDCBP-201ENST00000260130 PLCL2Q9UPR0 1127 aa16.09■□□□□ 0.17
SDCBP-201ENST00000260130 ADAMTS20P59510 1910 aa16.08■□□□□ 0.17
SDCBP-201ENST00000260130 IQANK1A0A1B0GTG1 560 aa16.08■□□□□ 0.16
SDCBP-201ENST00000260130 RAD1O60671 282 aa16.08■□□□□ 0.16
SDCBP-201ENST00000260130 SCRG1O75711 98 aa16.08■□□□□ 0.16
SDCBP-201ENST00000260130 C2P06681 752 aa16.08■□□□□ 0.16
SDCBP-201ENST00000260130 CALB2P22676 271 aa16.08■□□□□ 0.16
SDCBP-201ENST00000260130 CSRP3P50461 194 aa16.08■□□□□ 0.16
SDCBP-201ENST00000260130 ITGA1P56199 1179 aa16.08■□□□□ 0.16
SDCBP-201ENST00000260130 CDKL1Q00532 357 aa16.08■□□□□ 0.16
SDCBP-201ENST00000260130 ZXDCQ2QGD7 858 aaPredicted RBP16.08■□□□□ 0.16
SDCBP-201ENST00000260130 DEFB110Q30KQ9 67 aa16.08■□□□□ 0.16
SDCBP-201ENST00000260130 TAF1BQ53T94 588 aaPredicted RBP16.08■□□□□ 0.16
SDCBP-201ENST00000260130 ZC3H12BQ5HYM0 836 aaKnown RBP16.08■□□□□ 0.16
SDCBP-201ENST00000260130 FRA10AC1Q70Z53 315 aa16.08■□□□□ 0.16
SDCBP-201ENST00000260130 TMEM126BQ8IUX1 230 aa16.08■□□□□ 0.16
SDCBP-201ENST00000260130 NLGN4XQ8N0W4 816 aa16.08■□□□□ 0.16
SDCBP-201ENST00000260130 NLGN4YQ8NFZ3 816 aaPredicted RBP16.08■□□□□ 0.16
SDCBP-201ENST00000260130 TCP10LQ8TDR4 215 aa16.08■□□□□ 0.16
SDCBP-201ENST00000260130 MZB1Q8WU39 189 aa16.08■□□□□ 0.16
SDCBP-201ENST00000260130 DCAKDQ8WVC6 231 aa16.08■□□□□ 0.16
SDCBP-201ENST00000260130 MANSC1Q9H8J5 431 aa16.08■□□□□ 0.16
SDCBP-201ENST00000260130 ALDOAP04075 364 aaKnown RBP16.07■□□□□ 0.16
SDCBP-201ENST00000260130 NTRK1P04629 796 aa16.07■□□□□ 0.16
SDCBP-201ENST00000260130 ANXA5P08758 320 aa16.07■□□□□ 0.16
SDCBP-201ENST00000260130 CNTFP26441 200 aa16.07■□□□□ 0.16
SDCBP-201ENST00000260130 TYK2P29597 1187 aa16.07■□□□□ 0.16
SDCBP-201ENST00000260130 GMPRP36959 345 aa16.07■□□□□ 0.16
SDCBP-201ENST00000260130 SERPINB8P50452 374 aa16.07■□□□□ 0.16
SDCBP-201ENST00000260130 TLE3Q04726 772 aa16.07■□□□□ 0.16
SDCBP-201ENST00000260130 MCATQ8IVS2 390 aaKnown RBP16.07■□□□□ 0.16
SDCBP-201ENST00000260130 GPR135Q8IZ08 494 aa16.07■□□□□ 0.16
SDCBP-201ENST00000260130 FAM13CQ8NE31 585 aa16.07■□□□□ 0.16
SDCBP-201ENST00000260130 OR56A3Q8NH54 315 aa16.07■□□□□ 0.16
SDCBP-201ENST00000260130 SGPP1Q9BX95 441 aa16.07■□□□□ 0.16
SDCBP-201ENST00000260130 TRIM55Q9BYV6 548 aa16.07■□□□□ 0.16
SDCBP-201ENST00000260130 SLC6A20Q9NP91 592 aa16.07■□□□□ 0.16
SDCBP-201ENST00000260130 SSUH2Q9Y2M2 353 aa16.07■□□□□ 0.16
SDCBP-201ENST00000260130 PCDHB3Q9Y5E6 796 aa16.07■□□□□ 0.16
SDCBP-201ENST00000260130 AHCTF1Q8WYP5 2266 aa16.07■□□□□ 0.16
SDCBP-201ENST00000260130 A0A087X1B8 175 aa16.07■□□□□ 0.16
SDCBP-201ENST00000260130 IGKV1-8A0A0C4DH67 115 aa16.07■□□□□ 0.16
SDCBP-201ENST00000260130 TEX51A0A1B0GUA7 166 aa16.07■□□□□ 0.16
SDCBP-201ENST00000260130 MT-ND3P03897 115 aa16.07■□□□□ 0.16
SDCBP-201ENST00000260130 LTA4HP09960 611 aaKnown RBP16.07■□□□□ 0.16
SDCBP-201ENST00000260130 DLG1Q12959 904 aa16.07■□□□□ 0.16
SDCBP-201ENST00000260130 MAP7Q14244 749 aa16.07■□□□□ 0.16
SDCBP-201ENST00000260130 PRAMEF17Q5VTA0 474 aa16.07■□□□□ 0.16
SDCBP-201ENST00000260130 PRAMEF13Q5VWM6 474 aa16.07■□□□□ 0.16
SDCBP-201ENST00000260130 CAPN13Q6MZZ7 669 aaPredicted RBP16.07■□□□□ 0.16
SDCBP-201ENST00000260130 C6orf15Q6UXA7 325 aaPredicted RBP16.07■□□□□ 0.16
SDCBP-201ENST00000260130 ESX1Q8N693 406 aa16.07■□□□□ 0.16
SDCBP-201ENST00000260130 IL22RA1Q8N6P7 574 aa16.07■□□□□ 0.16
SDCBP-201ENST00000260130 KIAA1191Q96A73 305 aa16.07■□□□□ 0.16
SDCBP-201ENST00000260130 EGFL8Q99944 293 aa16.07■□□□□ 0.16
SDCBP-201ENST00000260130 NMRAL1Q9HBL8 299 aa16.07■□□□□ 0.16
SDCBP-201ENST00000260130 ANKMY1Q9P2S6 941 aa16.07■□□□□ 0.16
SDCBP-201ENST00000260130 SNX7Q9UNH6 387 aa16.07■□□□□ 0.16
SDCBP-201ENST00000260130 A0A096LPK6 155 aa16.06■□□□□ 0.16
SDCBP-201ENST00000260130 OR2A25A4D2G3 310 aa16.06■□□□□ 0.16
SDCBP-201ENST00000260130 E7EQ34 232 aa16.06■□□□□ 0.16
SDCBP-201ENST00000260130 CTSVO60911 334 aa16.06■□□□□ 0.16
SDCBP-201ENST00000260130 PEX11AO75192 247 aa16.06■□□□□ 0.16
SDCBP-201ENST00000260130 OR2B3O76000 313 aa16.06■□□□□ 0.16
SDCBP-201ENST00000260130 CBX6O95503 412 aa16.06■□□□□ 0.16
SDCBP-201ENST00000260130 TGFBIQ15582 683 aa16.06■□□□□ 0.16
SDCBP-201ENST00000260130 LGSNQ5TDP6 509 aa16.06■□□□□ 0.16
SDCBP-201ENST00000260130 BROXQ5VW32 411 aa16.06■□□□□ 0.16
SDCBP-201ENST00000260130 CLNKQ7Z7G1 428 aa16.06■□□□□ 0.16
SDCBP-201ENST00000260130 MTDHQ86UE4 582 aaKnown RBP16.06■□□□□ 0.16
SDCBP-201ENST00000260130 GPSM1Q86YR5 675 aa16.06■□□□□ 0.16
SDCBP-201ENST00000260130 GALNT6Q8NCL4 622 aa16.06■□□□□ 0.16
SDCBP-201ENST00000260130 PTERQ96BW5 349 aa16.06■□□□□ 0.16
SDCBP-201ENST00000260130 PYCR2Q96C36 320 aa16.06■□□□□ 0.16
SDCBP-201ENST00000260130 DSPP15924 2871 aaKnown RBP16.06■□□□□ 0.16
SDCBP-201ENST00000260130 H3BMH7 237 aa16.06■□□□□ 0.16
SDCBP-201ENST00000260130 CPNE3O75131 537 aaKnown RBP16.06■□□□□ 0.16
SDCBP-201ENST00000260130 KRT37O76014 449 aa16.06■□□□□ 0.16
SDCBP-201ENST00000260130 NPPBP16860 134 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms