RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 TRIM38O00635 465 aa12.43□□□□□ -0.42
LSM8-201ENST00000249299 FLRT2O43155 660 aa12.43□□□□□ -0.42
LSM8-201ENST00000249299 RSL1D1O76021 490 aaKnown RBP12.43□□□□□ -0.42
LSM8-201ENST00000249299 SERPINA6P08185 405 aa12.43□□□□□ -0.42
LSM8-201ENST00000249299 PRR35P0CG20 571 aa12.43□□□□□ -0.42
LSM8-201ENST00000249299 CKMT1AP12532 417 aa12.43□□□□□ -0.42
LSM8-201ENST00000249299 EZRP15311 586 aaKnown RBP12.43□□□□□ -0.42
LSM8-201ENST00000249299 POLR2CP19387 275 aaPredicted RBP12.43□□□□□ -0.42
LSM8-201ENST00000249299 MRPL19P49406 292 aaKnown RBP12.43□□□□□ -0.42
LSM8-201ENST00000249299 CSNK1G2P78368 415 aa12.43□□□□□ -0.42
LSM8-201ENST00000249299 SLBPQ14493 270 aaKnown RBP eCLIP12.43□□□□□ -0.42
LSM8-201ENST00000249299 MANEAQ5SRI9 462 aa12.43□□□□□ -0.42
LSM8-201ENST00000249299 CATSPEREQ5SY80 951 aa12.43□□□□□ -0.42
LSM8-201ENST00000249299 FAM91A1Q658Y4 838 aa12.43□□□□□ -0.42
LSM8-201ENST00000249299 WDR74Q6RFH5 385 aaPredicted RBP12.43□□□□□ -0.42
LSM8-201ENST00000249299 CHSY3Q70JA7 882 aa12.43□□□□□ -0.42
LSM8-201ENST00000249299 SPATA19Q7Z5L4 167 aa12.43□□□□□ -0.42
LSM8-201ENST00000249299 DDIASQ8IXT1 998 aa12.43□□□□□ -0.42
LSM8-201ENST00000249299 FAM9CQ8IZT9 166 aa12.43□□□□□ -0.42
LSM8-201ENST00000249299 RILPQ96NA2 401 aa12.43□□□□□ -0.42
LSM8-201ENST00000249299 KCNA7Q96RP8 456 aa12.43□□□□□ -0.42
LSM8-201ENST00000249299 ACAT2Q9BWD1 397 aa12.43□□□□□ -0.42
LSM8-201ENST00000249299 SEMA6CQ9H3T2 930 aa12.43□□□□□ -0.42
LSM8-201ENST00000249299 IL21RQ9HBE5 538 aa12.43□□□□□ -0.42
LSM8-201ENST00000249299 SEMA5BQ9P283 1151 aa12.43□□□□□ -0.42
LSM8-201ENST00000249299 ZNF490Q9ULM2 529 aaPredicted RBP12.43□□□□□ -0.42
LSM8-201ENST00000249299 CCL27Q9Y4X3 112 aa12.43□□□□□ -0.42
LSM8-201ENST00000249299 RNF215Q9Y6U7 377 aa12.43□□□□□ -0.42
LSM8-201ENST00000249299 PCDH15Q96QU1 1955 aa12.42□□□□□ -0.42
LSM8-201ENST00000249299 SDK1Q7Z5N4 2213 aa12.42□□□□□ -0.42
LSM8-201ENST00000249299 IGHV1OR21-1A0A087WYE8 117 aa12.42□□□□□ -0.42
LSM8-201ENST00000249299 IGKV1-8A0A0C4DH67 115 aa12.42□□□□□ -0.42
LSM8-201ENST00000249299 LNP1A1A4G5 178 aa12.42□□□□□ -0.42
LSM8-201ENST00000249299 GSAPA4D1B5 854 aa12.42□□□□□ -0.42
LSM8-201ENST00000249299 H7BY64 318 aa12.42□□□□□ -0.42
LSM8-201ENST00000249299 TOX3O15405 576 aaPredicted RBP12.42□□□□□ -0.42
LSM8-201ENST00000249299 SIGLEC6O43699 453 aa12.42□□□□□ -0.42
LSM8-201ENST00000249299 DUX1O43812 170 aa12.42□□□□□ -0.42
LSM8-201ENST00000249299 CLEC3AO75596 197 aa12.42□□□□□ -0.42
LSM8-201ENST00000249299 PTX3P26022 381 aaPredicted RBP12.42□□□□□ -0.42
LSM8-201ENST00000249299 EPHA3P29320 983 aa12.42□□□□□ -0.42
LSM8-201ENST00000249299 SERPINB3P29508 390 aa12.42□□□□□ -0.42
LSM8-201ENST00000249299 GRIA3P42263 894 aa12.42□□□□□ -0.42
LSM8-201ENST00000249299 SCTRP47872 440 aa12.42□□□□□ -0.42
LSM8-201ENST00000249299 ATP4BP51164 291 aa12.42□□□□□ -0.42
LSM8-201ENST00000249299 RPS15AP62244 130 aaKnown RBP12.42□□□□□ -0.42
LSM8-201ENST00000249299 TUBB3Q13509 450 aa12.42□□□□□ -0.42
LSM8-201ENST00000249299 CUL3Q13618 768 aa12.42□□□□□ -0.42
LSM8-201ENST00000249299 ABRAXAS2Q15018 415 aa12.42□□□□□ -0.42
LSM8-201ENST00000249299 CSRP2Q16527 193 aa12.42□□□□□ -0.42
LSM8-201ENST00000249299 SLC9B1Q4ZJI4 515 aa12.42□□□□□ -0.42
LSM8-201ENST00000249299 ATP6AP1LQ52LC2 224 aa12.42□□□□□ -0.42
LSM8-201ENST00000249299 Q6ZSR9 355 aa12.42□□□□□ -0.42
LSM8-201ENST00000249299 GATAD2AQ86YP4 633 aa12.42□□□□□ -0.42
LSM8-201ENST00000249299 PLXDC1Q8IUK5 500 aa12.42□□□□□ -0.42
LSM8-201ENST00000249299 SFTPA2Q8IWL1 248 aa12.42□□□□□ -0.42
LSM8-201ENST00000249299 C2orf73Q8N5S3 287 aaPredicted RBP12.42□□□□□ -0.42
LSM8-201ENST00000249299 DCBLD1Q8N8Z6 715 aa12.42□□□□□ -0.42
LSM8-201ENST00000249299 TRPV3Q8NET8 790 aa12.42□□□□□ -0.42
LSM8-201ENST00000249299 PRSS33Q8NF86 280 aa12.42□□□□□ -0.42
LSM8-201ENST00000249299 APOLD1Q96LR9 279 aa12.42□□□□□ -0.42
LSM8-201ENST00000249299 PRAP1Q96NZ9 151 aa12.42□□□□□ -0.42
LSM8-201ENST00000249299 LRRC37BQ96QE4 947 aa12.42□□□□□ -0.42
LSM8-201ENST00000249299 DPH7Q9BTV6 452 aa12.42□□□□□ -0.42
LSM8-201ENST00000249299 TMUB1Q9BVT8 246 aa12.42□□□□□ -0.42
LSM8-201ENST00000249299 GTPBP2Q9BX10 602 aaKnown RBP12.42□□□□□ -0.42
LSM8-201ENST00000249299 TBC1D10AQ9BXI6 508 aa12.42□□□□□ -0.42
LSM8-201ENST00000249299 RABEP2Q9H5N1 569 aa12.42□□□□□ -0.42
LSM8-201ENST00000249299 CAAP1Q9H8G2 361 aa12.42□□□□□ -0.42
LSM8-201ENST00000249299 SIRT5Q9NXA8 310 aa12.42□□□□□ -0.42
LSM8-201ENST00000249299 ASIC5Q9NY37 505 aa12.42□□□□□ -0.42
LSM8-201ENST00000249299 HEY2Q9UBP5 337 aa12.42□□□□□ -0.42
LSM8-201ENST00000249299 SH2B3Q9UQQ2 575 aa12.42□□□□□ -0.42
LSM8-201ENST00000249299 ARHGEF17Q96PE2 2063 aaPredicted RBP12.42□□□□□ -0.42
LSM8-201ENST00000249299 TLCD2A6NGC4 264 aa12.41□□□□□ -0.42
LSM8-201ENST00000249299 ANKDD1BA6NHY2 528 aa12.41□□□□□ -0.42
LSM8-201ENST00000249299 EBAG9O00559 213 aa12.41□□□□□ -0.42
LSM8-201ENST00000249299 SKAP2O75563 359 aaPredicted RBP12.41□□□□□ -0.42
LSM8-201ENST00000249299 SEMA3DO95025 777 aa12.41□□□□□ -0.42
LSM8-201ENST00000249299 PDYNP01213 254 aa12.41□□□□□ -0.42
LSM8-201ENST00000249299 LMNAP02545 664 aaKnown RBP12.41□□□□□ -0.42
LSM8-201ENST00000249299 JUNP05412 331 aaKnown RBP12.41□□□□□ -0.42
LSM8-201ENST00000249299 GP1BAP07359 652 aa12.41□□□□□ -0.42
LSM8-201ENST00000249299 LINC00032P0C843 101 aa12.41□□□□□ -0.42
LSM8-201ENST00000249299 LBPP18428 481 aa12.41□□□□□ -0.42
LSM8-201ENST00000249299 VARSP26640 1264 aaKnown RBP12.41□□□□□ -0.42
LSM8-201ENST00000249299 PSMB5P28074 263 aa12.41□□□□□ -0.42
LSM8-201ENST00000249299 ERVK-8P63133 956 aa12.41□□□□□ -0.42
LSM8-201ENST00000249299 EMX2Q04743 252 aa12.41□□□□□ -0.42
LSM8-201ENST00000249299 GSTA3Q16772 222 aa12.41□□□□□ -0.42
LSM8-201ENST00000249299 LSM12Q3MHD2 195 aaKnown RBP12.41□□□□□ -0.42
LSM8-201ENST00000249299 TMEM35AQ53FP2 167 aa12.41□□□□□ -0.42
LSM8-201ENST00000249299 VWA5B1Q5TIE3 1220 aa12.41□□□□□ -0.42
LSM8-201ENST00000249299 KIAA1614Q5VZ46 1190 aa12.41□□□□□ -0.42
LSM8-201ENST00000249299 FIGLAQ6QHK4 219 aa12.41□□□□□ -0.42
LSM8-201ENST00000249299 PAQR7Q86WK9 346 aa12.41□□□□□ -0.42
LSM8-201ENST00000249299 KMT5CQ86Y97 462 aa12.41□□□□□ -0.42
LSM8-201ENST00000249299 CPSF7Q8N684 471 aaKnown RBP12.41□□□□□ -0.42
LSM8-201ENST00000249299 HUS1BQ8NHY5 278 aa12.41□□□□□ -0.42
LSM8-201ENST00000249299 WDR48Q8TAF3 677 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms