RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 OR2T5Q6IEZ7 315 aa18.86■□□□□ 0.61
CDC42EP1-201ENST00000249014 OR7G3Q8NG95 312 aa18.86■□□□□ 0.61
CDC42EP1-201ENST00000249014 OR2T29Q8NH02 315 aa18.86■□□□□ 0.61
CDC42EP1-201ENST00000249014 HUS1BQ8NHY5 278 aa18.86■□□□□ 0.61
CDC42EP1-201ENST00000249014 NEIL2Q969S2 332 aa18.86■□□□□ 0.61
CDC42EP1-201ENST00000249014 LRRC3BQ96PB8 259 aa18.86■□□□□ 0.61
CDC42EP1-201ENST00000249014 DUSP26Q9BV47 211 aa18.86■□□□□ 0.61
CDC42EP1-201ENST00000249014 BRF2Q9HAW0 419 aa18.86■□□□□ 0.61
CDC42EP1-201ENST00000249014 PAK1IP1Q9NWT1 392 aaPredicted RBP18.86■□□□□ 0.61
CDC42EP1-201ENST00000249014 COQ6Q9Y2Z9 468 aa18.86■□□□□ 0.61
CDC42EP1-201ENST00000249014 RAD23AP54725 363 aa18.86■□□□□ 0.61
CDC42EP1-201ENST00000249014 PCDH1Q08174 1060 aa18.86■□□□□ 0.61
CDC42EP1-201ENST00000249014 HKDC1Q2TB90 917 aa18.86■□□□□ 0.61
CDC42EP1-201ENST00000249014 ZNF658BQ4V348 819 aaPredicted RBP18.86■□□□□ 0.61
CDC42EP1-201ENST00000249014 ZC3H12BQ5HYM0 836 aaKnown RBP18.86■□□□□ 0.61
CDC42EP1-201ENST00000249014 PRSS36Q5K4E3 855 aa18.86■□□□□ 0.61
CDC42EP1-201ENST00000249014 GTF2IRD2BQ6EKJ0 949 aa18.86■□□□□ 0.61
CDC42EP1-201ENST00000249014 GTF2IRD2Q86UP8 949 aa18.86■□□□□ 0.61
CDC42EP1-201ENST00000249014 BPIFB6Q8NFQ5 453 aa18.86■□□□□ 0.61
CDC42EP1-201ENST00000249014 VN1R2Q8NFZ6 395 aa18.86■□□□□ 0.61
CDC42EP1-201ENST00000249014 B4GALNT2Q8NHY0 566 aa18.86■□□□□ 0.61
CDC42EP1-201ENST00000249014 EZH1Q92800 747 aaPredicted RBP18.86■□□□□ 0.61
CDC42EP1-201ENST00000249014 TBC1D20Q96BZ9 403 aa18.86■□□□□ 0.61
CDC42EP1-201ENST00000249014 TPT1P8Q9HAU6 139 aa18.86■□□□□ 0.61
CDC42EP1-201ENST00000249014 TMEM9Q9P0T7 183 aa18.86■□□□□ 0.61
CDC42EP1-201ENST00000249014 PCDHB11Q9Y5F2 797 aa18.86■□□□□ 0.61
CDC42EP1-201ENST00000249014 SLC1A7O00341 560 aa18.85■□□□□ 0.61
CDC42EP1-201ENST00000249014 ANXA4P09525 319 aaPredicted RBP18.85■□□□□ 0.61
CDC42EP1-201ENST00000249014 NUDT7P0C024 238 aa18.85■□□□□ 0.61
CDC42EP1-201ENST00000249014 CISD3P0C7P0 127 aa18.85■□□□□ 0.61
CDC42EP1-201ENST00000249014 HSD3B1P14060 373 aa18.85■□□□□ 0.61
CDC42EP1-201ENST00000249014 IGFBP5P24593 272 aa18.85■□□□□ 0.61
CDC42EP1-201ENST00000249014 HSD3B2P26439 372 aa18.85■□□□□ 0.61
CDC42EP1-201ENST00000249014 DAPP51397 102 aa18.85■□□□□ 0.61
CDC42EP1-201ENST00000249014 GALK1P51570 392 aa18.85■□□□□ 0.61
CDC42EP1-201ENST00000249014 GABARAPL2P60520 117 aa18.85■□□□□ 0.61
CDC42EP1-201ENST00000249014 MESP2Q0VG99 397 aa18.85■□□□□ 0.61
CDC42EP1-201ENST00000249014 RAPSNQ13702 412 aa18.85■□□□□ 0.61
CDC42EP1-201ENST00000249014 TCEAL5Q5H9L2 206 aa18.85■□□□□ 0.61
CDC42EP1-201ENST00000249014 TRIM74Q86UV6 250 aa18.85■□□□□ 0.61
CDC42EP1-201ENST00000249014 C12orf40Q86WS4 652 aa18.85■□□□□ 0.61
CDC42EP1-201ENST00000249014 LMNTD1Q8N9Z9 388 aa18.85■□□□□ 0.61
CDC42EP1-201ENST00000249014 GPR156Q8NFN8 814 aa18.85■□□□□ 0.61
CDC42EP1-201ENST00000249014 GABARAPL1Q9H0R8 117 aa18.85■□□□□ 0.61
CDC42EP1-201ENST00000249014 TM9SF3Q9HD45 589 aa18.85■□□□□ 0.61
CDC42EP1-201ENST00000249014 KIAA1549LQ6ZVL6 1849 aa18.85■□□□□ 0.61
CDC42EP1-201ENST00000249014 BCKDKO14874 412 aa18.85■□□□□ 0.61
CDC42EP1-201ENST00000249014 KIAA0355O15063 1070 aa18.85■□□□□ 0.61
CDC42EP1-201ENST00000249014 SPINT1O43278 529 aa18.85■□□□□ 0.61
CDC42EP1-201ENST00000249014 SOD1P00441 154 aa18.85■□□□□ 0.61
CDC42EP1-201ENST00000249014 EPCAMP16422 314 aa18.85■□□□□ 0.61
CDC42EP1-201ENST00000249014 TMBIM6P55061 237 aa18.85■□□□□ 0.61
CDC42EP1-201ENST00000249014 DHCR24Q15392 516 aa18.85■□□□□ 0.61
CDC42EP1-201ENST00000249014 RFX4Q33E94 735 aa18.85■□□□□ 0.61
CDC42EP1-201ENST00000249014 ZNF697Q5TEC3 545 aa18.85■□□□□ 0.61
CDC42EP1-201ENST00000249014 ERICH5Q6P6B1 374 aa18.85■□□□□ 0.61
CDC42EP1-201ENST00000249014 GRASPQ7Z6J2 395 aaPredicted RBP18.85■□□□□ 0.61
CDC42EP1-201ENST00000249014 CNIH3Q8TBE1 160 aa18.85■□□□□ 0.61
CDC42EP1-201ENST00000249014 CHTF18Q8WVB6 975 aa18.85■□□□□ 0.61
CDC42EP1-201ENST00000249014 TANKQ92844 425 aa18.85■□□□□ 0.61
CDC42EP1-201ENST00000249014 HSH2DQ96JZ2 352 aa18.85■□□□□ 0.61
CDC42EP1-201ENST00000249014 SH2B3Q9UQQ2 575 aa18.85■□□□□ 0.61
CDC42EP1-201ENST00000249014 ORC6Q9Y5N6 252 aa18.85■□□□□ 0.61
CDC42EP1-201ENST00000249014 TCF20Q9UGU0 1960 aaKnown RBP18.84■□□□□ 0.61
CDC42EP1-201ENST00000249014 A0A0J9YVX5 310 aa18.84■□□□□ 0.61
CDC42EP1-201ENST00000249014 C1orf226A1L170 272 aa18.84■□□□□ 0.61
CDC42EP1-201ENST00000249014 MYO1GB0I1T2 1018 aa18.84■□□□□ 0.61
CDC42EP1-201ENST00000249014 KPNA3O00505 521 aaPredicted RBP18.84■□□□□ 0.61
CDC42EP1-201ENST00000249014 MYO1DO94832 1006 aa18.84■□□□□ 0.61
CDC42EP1-201ENST00000249014 FABP3P05413 133 aa18.84■□□□□ 0.61
CDC42EP1-201ENST00000249014 ITGAMP11215 1152 aa18.84■□□□□ 0.61
CDC42EP1-201ENST00000249014 RYKP34925 604 aa18.84■□□□□ 0.61
CDC42EP1-201ENST00000249014 DGKGP49619 791 aa18.84■□□□□ 0.61
CDC42EP1-201ENST00000249014 CRYBA2P53672 197 aa18.84■□□□□ 0.61
CDC42EP1-201ENST00000249014 PLA2G16P53816 162 aa18.84■□□□□ 0.61
CDC42EP1-201ENST00000249014 RPS13P62277 151 aaKnown RBP18.84■□□□□ 0.61
CDC42EP1-201ENST00000249014 CPTPQ5TA50 214 aa18.84■□□□□ 0.61
CDC42EP1-201ENST00000249014 ERAP2Q6P179 960 aa18.84■□□□□ 0.61
CDC42EP1-201ENST00000249014 SLCO4C1Q6ZQN7 724 aa18.84■□□□□ 0.61
CDC42EP1-201ENST00000249014 CBLL1Q75N03 491 aa18.84■□□□□ 0.61
CDC42EP1-201ENST00000249014 TMPRSS11BQ86T26 416 aa18.84■□□□□ 0.61
CDC42EP1-201ENST00000249014 NLRP8Q86W28 1048 aa18.84■□□□□ 0.61
CDC42EP1-201ENST00000249014 SYNPOQ8N3V7 929 aa18.84■□□□□ 0.61
CDC42EP1-201ENST00000249014 PIK3C3Q8NEB9 887 aa18.84■□□□□ 0.61
CDC42EP1-201ENST00000249014 FBLIM1Q8WUP2 373 aa18.84■□□□□ 0.61
CDC42EP1-201ENST00000249014 ZNF480Q8WV37 535 aa18.84■□□□□ 0.61
CDC42EP1-201ENST00000249014 POF1BQ8WVV4 589 aa18.84■□□□□ 0.61
CDC42EP1-201ENST00000249014 OTUB2Q96DC9 234 aa18.84■□□□□ 0.61
CDC42EP1-201ENST00000249014 THAP11Q96EK4 314 aa18.84■□□□□ 0.61
CDC42EP1-201ENST00000249014 METTL2AQ96IZ6 378 aaKnown RBP18.84■□□□□ 0.61
CDC42EP1-201ENST00000249014 LRIG1Q96JA1 1093 aa18.84■□□□□ 0.61
CDC42EP1-201ENST00000249014 CSF3RQ99062 836 aa18.84■□□□□ 0.61
CDC42EP1-201ENST00000249014 CHST8Q9H2A9 424 aa18.84■□□□□ 0.61
CDC42EP1-201ENST00000249014 CXXC1Q9P0U4 656 aaPredicted RBP18.84■□□□□ 0.61
CDC42EP1-201ENST00000249014 RPS6KA6Q9UK32 745 aa18.84■□□□□ 0.61
CDC42EP1-201ENST00000249014 H3BM21 787 aa18.83■□□□□ 0.61
CDC42EP1-201ENST00000249014 K7ESM1 405 aa18.83■□□□□ 0.61
CDC42EP1-201ENST00000249014 C1orf105O95561 183 aa18.83■□□□□ 0.61
CDC42EP1-201ENST00000249014 CYP17A1P05093 508 aa18.83■□□□□ 0.61
CDC42EP1-201ENST00000249014 CYP4B1P13584 511 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms