RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 GPR27Q9NS67 375 aa16.39■□□□□ 0.21
CDKN1A-201ENST00000244741 ZIM2Q9NZV7 527 aa16.39■□□□□ 0.21
CDKN1A-201ENST00000244741 LEF1Q9UJU2 399 aaPredicted RBP16.39■□□□□ 0.21
CDKN1A-201ENST00000244741 WDR37Q9Y2I8 494 aa16.39■□□□□ 0.21
CDKN1A-201ENST00000244741 ARHGAP10A1A4S6 786 aa16.38■□□□□ 0.21
CDKN1A-201ENST00000244741 FAM234BA2RU67 622 aa16.38■□□□□ 0.21
CDKN1A-201ENST00000244741 NCK1P16333 377 aa16.38■□□□□ 0.21
CDKN1A-201ENST00000244741 IL10P22301 178 aa16.38■□□□□ 0.21
CDKN1A-201ENST00000244741 RGS4P49798 205 aa16.38■□□□□ 0.21
CDKN1A-201ENST00000244741 C21orf59P57076 290 aa16.38■□□□□ 0.21
CDKN1A-201ENST00000244741 SPATS1Q496A3 300 aa16.38■□□□□ 0.21
CDKN1A-201ENST00000244741 IL27RAQ6UWB1 636 aa16.38■□□□□ 0.21
CDKN1A-201ENST00000244741 PARGQ86W56 976 aa16.38■□□□□ 0.21
CDKN1A-201ENST00000244741 OR4F6Q8NGB9 312 aa16.38■□□□□ 0.21
CDKN1A-201ENST00000244741 NMD3Q96D46 503 aaKnown RBP16.38■□□□□ 0.21
CDKN1A-201ENST00000244741 SCARF2Q96GP6 870 aaPredicted RBP16.38■□□□□ 0.21
CDKN1A-201ENST00000244741 CCT7Q99832 543 aa16.38■□□□□ 0.21
CDKN1A-201ENST00000244741 AGPAT4Q9NRZ5 378 aa16.38■□□□□ 0.21
CDKN1A-201ENST00000244741 INTS7Q9NVH2 962 aaKnown RBP16.38■□□□□ 0.21
CDKN1A-201ENST00000244741 PILRBQ9UKJ0 227 aa16.38■□□□□ 0.21
CDKN1A-201ENST00000244741 USP22Q9UPT9 525 aa16.38■□□□□ 0.21
CDKN1A-201ENST00000244741 CACNA1EQ15878 2313 aa16.38■□□□□ 0.21
CDKN1A-201ENST00000244741 TRBV23OR9-2A0A075B6M9 112 aa16.38■□□□□ 0.21
CDKN1A-201ENST00000244741 PATE3B3GLJ2 98 aa16.38■□□□□ 0.21
CDKN1A-201ENST00000244741 GPR89AB7ZAQ6 455 aa16.38■□□□□ 0.21
CDKN1A-201ENST00000244741 H3BM21 787 aa16.38■□□□□ 0.21
CDKN1A-201ENST00000244741 PDLIM1O00151 329 aa16.38■□□□□ 0.21
CDKN1A-201ENST00000244741 SDC3O75056 442 aa16.38■□□□□ 0.21
CDKN1A-201ENST00000244741 KATNA1O75449 491 aa16.38■□□□□ 0.21
CDKN1A-201ENST00000244741 SLCO2B1O94956 709 aa16.38■□□□□ 0.21
CDKN1A-201ENST00000244741 EML2O95834 649 aa16.38■□□□□ 0.21
CDKN1A-201ENST00000244741 GPR89BP0CG08 455 aa16.38■□□□□ 0.21
CDKN1A-201ENST00000244741 JUNDP17535 347 aa16.38■□□□□ 0.21
CDKN1A-201ENST00000244741 PSMA4P25789 261 aaKnown RBP16.38■□□□□ 0.21
CDKN1A-201ENST00000244741 GTF2H2Q13888 395 aa16.38■□□□□ 0.21
CDKN1A-201ENST00000244741 PRRT3Q5FWE3 981 aa16.38■□□□□ 0.21
CDKN1A-201ENST00000244741 PLEKHS1Q5SXH7 462 aa16.38■□□□□ 0.21
CDKN1A-201ENST00000244741 NANOGP8Q6NSW7 305 aa16.38■□□□□ 0.21
CDKN1A-201ENST00000244741 GTF2H2CQ6P1K8 395 aa16.38■□□□□ 0.21
CDKN1A-201ENST00000244741 ADAMTSL2Q86TH1 951 aa16.38■□□□□ 0.21
CDKN1A-201ENST00000244741 EPHX4Q8IUS5 362 aa16.38■□□□□ 0.21
CDKN1A-201ENST00000244741 SFTPA2Q8IWL1 248 aa16.38■□□□□ 0.21
CDKN1A-201ENST00000244741 CBR4Q8N4T8 237 aa16.38■□□□□ 0.21
CDKN1A-201ENST00000244741 GOLM1Q8NBJ4 401 aa16.38■□□□□ 0.21
CDKN1A-201ENST00000244741 HM13Q8TCT9 377 aa16.38■□□□□ 0.21
CDKN1A-201ENST00000244741 NUDT8Q8WV74 236 aa16.38■□□□□ 0.21
CDKN1A-201ENST00000244741 KCTD14Q9BQ13 255 aaPredicted RBP16.38■□□□□ 0.21
CDKN1A-201ENST00000244741 SMOC1Q9H4F8 434 aa16.38■□□□□ 0.21
CDKN1A-201ENST00000244741 RMI1Q9H9A7 625 aa16.38■□□□□ 0.21
CDKN1A-201ENST00000244741 NANOGQ9H9S0 305 aa16.38■□□□□ 0.21
CDKN1A-201ENST00000244741 ARHGEF17Q96PE2 2063 aaPredicted RBP16.37■□□□□ 0.21
CDKN1A-201ENST00000244741 TNFRSF10CO14798 259 aa16.37■□□□□ 0.21
CDKN1A-201ENST00000244741 FFAR2O15552 330 aa16.37■□□□□ 0.21
CDKN1A-201ENST00000244741 TNFP01375 233 aa16.37■□□□□ 0.21
CDKN1A-201ENST00000244741 CLCNKAP51800 687 aa16.37■□□□□ 0.21
CDKN1A-201ENST00000244741 SLC2A7Q6PXP3 512 aa16.37■□□□□ 0.21
CDKN1A-201ENST00000244741 MBOAT1Q6ZNC8 495 aa16.37■□□□□ 0.21
CDKN1A-201ENST00000244741 PTRH1Q86Y79 214 aaKnown RBP16.37■□□□□ 0.21
CDKN1A-201ENST00000244741 PHACTR4Q8IZ21 702 aa16.37■□□□□ 0.21
CDKN1A-201ENST00000244741 OXR1Q8N573 874 aa16.37■□□□□ 0.21
CDKN1A-201ENST00000244741 OLAHQ9NV23 265 aa16.37■□□□□ 0.21
CDKN1A-201ENST00000244741 PADI4Q9UM07 663 aa16.37■□□□□ 0.21
CDKN1A-201ENST00000244741 TNPO3Q9Y5L0 923 aaKnown RBP16.37■□□□□ 0.21
CDKN1A-201ENST00000244741 SNX11Q9Y5W9 270 aa16.37■□□□□ 0.21
CDKN1A-201ENST00000244741 C17orf113A0A1B0GUU1 675 aa16.37■□□□□ 0.21
CDKN1A-201ENST00000244741 TCRBV5S2A0A599 114 aa16.37■□□□□ 0.21
CDKN1A-201ENST00000244741 PDZK1P1A8MUH7 402 aa16.37■□□□□ 0.21
CDKN1A-201ENST00000244741 DLGAP1O14490 977 aa16.37■□□□□ 0.21
CDKN1A-201ENST00000244741 KPNA5O15131 536 aa16.37■□□□□ 0.21
CDKN1A-201ENST00000244741 TAPBPO15533 448 aa16.37■□□□□ 0.21
CDKN1A-201ENST00000244741 GUCA1CO95843 209 aa16.37■□□□□ 0.21
CDKN1A-201ENST00000244741 CFIP05156 583 aa16.37■□□□□ 0.21
CDKN1A-201ENST00000244741 FASP25445 335 aa16.37■□□□□ 0.21
CDKN1A-201ENST00000244741 ACTR1BP42025 376 aa16.37■□□□□ 0.21
CDKN1A-201ENST00000244741 NXPH1P58417 271 aa16.37■□□□□ 0.21
CDKN1A-201ENST00000244741 ACTR1AP61163 376 aa16.37■□□□□ 0.21
CDKN1A-201ENST00000244741 LSAMPQ13449 338 aa16.37■□□□□ 0.21
CDKN1A-201ENST00000244741 GBX1Q14549 363 aa16.37■□□□□ 0.21
CDKN1A-201ENST00000244741 ABRAXAS2Q15018 415 aa16.37■□□□□ 0.21
CDKN1A-201ENST00000244741 PHKG1Q16816 387 aa16.37■□□□□ 0.21
CDKN1A-201ENST00000244741 CYP51A1Q16850 503 aa16.37■□□□□ 0.21
CDKN1A-201ENST00000244741 METRNLQ641Q3 311 aa16.37■□□□□ 0.21
CDKN1A-201ENST00000244741 DUS1LQ6P1R4 473 aaKnown RBP16.37■□□□□ 0.21
CDKN1A-201ENST00000244741 ZFAND4Q86XD8 727 aa16.37■□□□□ 0.21
CDKN1A-201ENST00000244741 TRPV3Q8NET8 790 aa16.37■□□□□ 0.21
CDKN1A-201ENST00000244741 ZC3H10Q96K80 434 aaKnown RBP16.37■□□□□ 0.21
CDKN1A-201ENST00000244741 NRTNQ99748 197 aa16.37■□□□□ 0.21
CDKN1A-201ENST00000244741 RBM38Q9H0Z9 239 aaKnown RBP16.37■□□□□ 0.21
CDKN1A-201ENST00000244741 ACTL8Q9H568 366 aa16.37■□□□□ 0.21
CDKN1A-201ENST00000244741 PIF1Q9H611 641 aa16.37■□□□□ 0.21
CDKN1A-201ENST00000244741 TBC1D29Q9UFV1 150 aa16.37■□□□□ 0.21
CDKN1A-201ENST00000244741 APOBEC3BQ9UH17 382 aaKnown RBP16.37■□□□□ 0.21
CDKN1A-201ENST00000244741 PCDHGA2Q9Y5H1 932 aa16.37■□□□□ 0.21
CDKN1A-201ENST00000244741 LRP4O75096 1905 aa16.36■□□□□ 0.21
CDKN1A-201ENST00000244741 PRAMEF33A0A0G2JMD5 474 aa16.36■□□□□ 0.21
CDKN1A-201ENST00000244741 OR52A4PA6NMU1 304 aa16.36■□□□□ 0.21
CDKN1A-201ENST00000244741 TOR1BO14657 336 aa16.36■□□□□ 0.21
CDKN1A-201ENST00000244741 S100BP04271 92 aaPredicted RBP16.36■□□□□ 0.21
CDKN1A-201ENST00000244741 G6PDP11413 515 aa16.36■□□□□ 0.21
CDKN1A-201ENST00000244741 CTSEP14091 401 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms