RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 NCF1CA8MVU1 366 aaPredicted RBP10.8□□□□□ -0.68
SF3B6-201ENST00000233468 C21orf140B9A014 251 aa10.8□□□□□ -0.68
SF3B6-201ENST00000233468 H7BY64 318 aa10.8□□□□□ -0.68
SF3B6-201ENST00000233468 ZNF749O43361 778 aa10.8□□□□□ -0.68
SF3B6-201ENST00000233468 CDH16O75309 829 aa10.8□□□□□ -0.68
SF3B6-201ENST00000233468 H2AFYO75367 372 aaKnown RBP10.8□□□□□ -0.68
SF3B6-201ENST00000233468 NTRK1P04629 796 aa10.8□□□□□ -0.68
SF3B6-201ENST00000233468 PIM1P11309 404 aaPredicted RBP10.8□□□□□ -0.68
SF3B6-201ENST00000233468 NCF1P14598 390 aaPredicted RBP10.8□□□□□ -0.68
SF3B6-201ENST00000233468 NPPBP16860 134 aa10.8□□□□□ -0.68
SF3B6-201ENST00000233468 GNAZP19086 355 aa10.8□□□□□ -0.68
SF3B6-201ENST00000233468 MAGEA12P43365 314 aa10.8□□□□□ -0.68
SF3B6-201ENST00000233468 RPS15AP62244 130 aaKnown RBP10.8□□□□□ -0.68
SF3B6-201ENST00000233468 MC1RQ01726 317 aa10.8□□□□□ -0.68
SF3B6-201ENST00000233468 IFFO1Q0D2I5 559 aa10.8□□□□□ -0.68
SF3B6-201ENST00000233468 RASA2Q15283 850 aa10.8□□□□□ -0.68
SF3B6-201ENST00000233468 PTCHD3Q3KNS1 767 aa10.8□□□□□ -0.68
SF3B6-201ENST00000233468 LINC00303Q3SY05 128 aa10.8□□□□□ -0.68
SF3B6-201ENST00000233468 ZNF425Q6IV72 752 aa10.8□□□□□ -0.68
SF3B6-201ENST00000233468 MBOAT1Q6ZNC8 495 aa10.8□□□□□ -0.68
SF3B6-201ENST00000233468 RNF44Q7L0R7 432 aa10.8□□□□□ -0.68
SF3B6-201ENST00000233468 THOC6Q86W42 341 aaKnown RBP10.8□□□□□ -0.68
SF3B6-201ENST00000233468 PAQR7Q86WK9 346 aa10.8□□□□□ -0.68
SF3B6-201ENST00000233468 TDRPQ86YL5 185 aa10.8□□□□□ -0.68
SF3B6-201ENST00000233468 GALNT6Q8NCL4 622 aa10.8□□□□□ -0.68
SF3B6-201ENST00000233468 PDPRQ8NCN5 879 aa10.8□□□□□ -0.68
SF3B6-201ENST00000233468 KCTD4Q8WVF5 259 aa10.8□□□□□ -0.68
SF3B6-201ENST00000233468 SLC5A11Q8WWX8 675 aa10.8□□□□□ -0.68
SF3B6-201ENST00000233468 CAVIN3Q969G5 261 aa10.8□□□□□ -0.68
SF3B6-201ENST00000233468 RHBDF1Q96CC6 855 aa10.8□□□□□ -0.68
SF3B6-201ENST00000233468 NXNL1Q96CM4 212 aa10.8□□□□□ -0.68
SF3B6-201ENST00000233468 PRAP1Q96NZ9 151 aa10.8□□□□□ -0.68
SF3B6-201ENST00000233468 GPR87Q9BY21 358 aa10.8□□□□□ -0.68
SF3B6-201ENST00000233468 SPRY4Q9C004 299 aa10.8□□□□□ -0.68
SF3B6-201ENST00000233468 UNKQ9C0B0 810 aaKnown RBP10.8□□□□□ -0.68
SF3B6-201ENST00000233468 GPN2Q9H9Y4 310 aaPredicted RBP10.8□□□□□ -0.68
SF3B6-201ENST00000233468 LHX9Q9NQ69 397 aa10.8□□□□□ -0.68
SF3B6-201ENST00000233468 ENAMQ9NRM1 1142 aa10.8□□□□□ -0.68
SF3B6-201ENST00000233468 IGSF5Q9NSI5 407 aa10.8□□□□□ -0.68
SF3B6-201ENST00000233468 GPRC5BQ9NZH0 403 aa10.8□□□□□ -0.68
SF3B6-201ENST00000233468 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.8□□□□□ -0.68
SF3B6-201ENST00000233468 KLHL20Q9Y2M5 609 aa10.8□□□□□ -0.68
SF3B6-201ENST00000233468 TNPO3Q9Y5L0 923 aaKnown RBP10.8□□□□□ -0.68
SF3B6-201ENST00000233468 V9GYY5 206 aaPredicted RBP10.8□□□□□ -0.68
SF3B6-201ENST00000233468 TLN1Q9Y490 2541 aaKnown RBP10.8□□□□□ -0.68
SF3B6-201ENST00000233468 SDK2Q58EX2 2172 aa10.79□□□□□ -0.68
SF3B6-201ENST00000233468 KCNE1BA0A087WTH5 132 aa10.79□□□□□ -0.68
SF3B6-201ENST00000233468 A0A0J9YVX5 310 aa10.79□□□□□ -0.68
SF3B6-201ENST00000233468 SUPT3HB4E1H0 165 aa10.79□□□□□ -0.68
SF3B6-201ENST00000233468 C9J4A7 227 aa10.79□□□□□ -0.68
SF3B6-201ENST00000233468 MEN1O00255 615 aa10.79□□□□□ -0.68
SF3B6-201ENST00000233468 CLGNO14967 610 aa10.79□□□□□ -0.68
SF3B6-201ENST00000233468 ERLIN1O75477 346 aa10.79□□□□□ -0.68
SF3B6-201ENST00000233468 SUPT3HO75486 399 aa10.79□□□□□ -0.68
SF3B6-201ENST00000233468 STK16O75716 305 aa10.79□□□□□ -0.68
SF3B6-201ENST00000233468 WDR47O94967 919 aa10.79□□□□□ -0.68
SF3B6-201ENST00000233468 GFAPP14136 432 aa10.79□□□□□ -0.68
SF3B6-201ENST00000233468 GGT5P36269 586 aa10.79□□□□□ -0.68
SF3B6-201ENST00000233468 HSD17B3P37058 310 aa10.79□□□□□ -0.68
SF3B6-201ENST00000233468 STAT5AP42229 794 aa10.79□□□□□ -0.68
SF3B6-201ENST00000233468 GABRA4P48169 554 aa10.79□□□□□ -0.68
SF3B6-201ENST00000233468 CSRP3P50461 194 aa10.79□□□□□ -0.68
SF3B6-201ENST00000233468 VSX2P58304 361 aaPredicted RBP10.79□□□□□ -0.68
SF3B6-201ENST00000233468 RPS15P62841 145 aaKnown RBP10.79□□□□□ -0.68
SF3B6-201ENST00000233468 NFKB2Q00653 900 aa10.79□□□□□ -0.68
SF3B6-201ENST00000233468 OR4D1Q15615 310 aa10.79□□□□□ -0.68
SF3B6-201ENST00000233468 NDUFA9Q16795 377 aa10.79□□□□□ -0.68
SF3B6-201ENST00000233468 MUM1Q2TAK8 710 aa10.79□□□□□ -0.68
SF3B6-201ENST00000233468 DEFB110Q30KQ9 67 aa10.79□□□□□ -0.68
SF3B6-201ENST00000233468 WASHC2DQ5SRD0 308 aa10.79□□□□□ -0.68
SF3B6-201ENST00000233468 UBAP2Q5T6F2 1119 aaKnown RBP10.79□□□□□ -0.68
SF3B6-201ENST00000233468 GARNL3Q5VVW2 1013 aa10.79□□□□□ -0.68
SF3B6-201ENST00000233468 RHBDD2Q6NTF9 364 aa10.79□□□□□ -0.68
SF3B6-201ENST00000233468 METTL2BQ6P1Q9 378 aaKnown RBP10.79□□□□□ -0.68
SF3B6-201ENST00000233468 FBXO42Q6P3S6 717 aa10.79□□□□□ -0.68
SF3B6-201ENST00000233468 LRRC70Q7Z2Q7 622 aa10.79□□□□□ -0.68
SF3B6-201ENST00000233468 KLHDC8AQ8IYD2 350 aa10.79□□□□□ -0.68
SF3B6-201ENST00000233468 CENPLQ8N0S6 344 aaPredicted RBP10.79□□□□□ -0.68
SF3B6-201ENST00000233468 RIBC1Q8N443 379 aaPredicted RBP10.79□□□□□ -0.68
SF3B6-201ENST00000233468 CAMKVQ8NCB2 501 aa10.79□□□□□ -0.68
SF3B6-201ENST00000233468 ABHD11Q8NFV4 315 aa10.79□□□□□ -0.68
SF3B6-201ENST00000233468 AENQ8WTP8 325 aaKnown RBP10.79□□□□□ -0.68
SF3B6-201ENST00000233468 MR1Q95460 341 aa10.79□□□□□ -0.68
SF3B6-201ENST00000233468 PTERQ96BW5 349 aa10.79□□□□□ -0.68
SF3B6-201ENST00000233468 PYCR2Q96C36 320 aa10.79□□□□□ -0.68
SF3B6-201ENST00000233468 SCYL1Q96KG9 808 aa10.79□□□□□ -0.68
SF3B6-201ENST00000233468 ZNF285Q96NJ3 590 aa10.79□□□□□ -0.68
SF3B6-201ENST00000233468 MRPL57Q9BQC6 102 aaKnown RBP10.79□□□□□ -0.68
SF3B6-201ENST00000233468 AIF1LQ9BQI0 150 aa10.79□□□□□ -0.68
SF3B6-201ENST00000233468 ROPN1BQ9BZX4 212 aaPredicted RBP10.79□□□□□ -0.68
SF3B6-201ENST00000233468 TRIM4Q9C037 500 aa10.79□□□□□ -0.68
SF3B6-201ENST00000233468 PITHD1Q9GZP4 211 aaPredicted RBP10.79□□□□□ -0.68
SF3B6-201ENST00000233468 ROPN1Q9HAT0 212 aaPredicted RBP10.79□□□□□ -0.68
SF3B6-201ENST00000233468 PELI2Q9HAT8 420 aa10.79□□□□□ -0.68
SF3B6-201ENST00000233468 SLC6A20Q9NP91 592 aa10.79□□□□□ -0.68
SF3B6-201ENST00000233468 DNAJC11Q9NVH1 559 aa10.79□□□□□ -0.68
SF3B6-201ENST00000233468 IKZF3Q9UKT9 509 aa10.79□□□□□ -0.68
SF3B6-201ENST00000233468 RAB21Q9UL25 225 aa10.79□□□□□ -0.68
SF3B6-201ENST00000233468 SLC22A14Q9Y267 594 aa10.79□□□□□ -0.68
SF3B6-201ENST00000233468 UBR5O95071 2799 aaPredicted RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms