RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 FAM220BPB1ANY3 271 aa14.11□□□□□ -0.15
PRDM4-201ENST00000228437 SAP18O00422 153 aaKnown RBP14.11□□□□□ -0.15
PRDM4-201ENST00000228437 EPORP19235 508 aa14.11□□□□□ -0.15
PRDM4-201ENST00000228437 PBX3P40426 434 aa14.11□□□□□ -0.15
PRDM4-201ENST00000228437 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.11□□□□□ -0.15
PRDM4-201ENST00000228437 SHQ1Q6PI26 577 aaKnown RBP14.11□□□□□ -0.15
PRDM4-201ENST00000228437 SERPINA9Q86WD7 417 aa14.11□□□□□ -0.15
PRDM4-201ENST00000228437 CDCA5Q96FF9 252 aa14.11□□□□□ -0.15
PRDM4-201ENST00000228437 HAS3O00219 553 aa14.11□□□□□ -0.15
PRDM4-201ENST00000228437 UPK1AO00322 258 aa14.11□□□□□ -0.15
PRDM4-201ENST00000228437 AKR7A2O43488 359 aa14.11□□□□□ -0.15
PRDM4-201ENST00000228437 PRAMEF1O95521 474 aa14.11□□□□□ -0.15
PRDM4-201ENST00000228437 RPS17P08708 135 aaKnown RBP14.11□□□□□ -0.15
PRDM4-201ENST00000228437 TACR1P25103 407 aa14.11□□□□□ -0.15
PRDM4-201ENST00000228437 ADRA1AP35348 466 aa14.11□□□□□ -0.15
PRDM4-201ENST00000228437 CDKN2CP42773 168 aa14.11□□□□□ -0.15
PRDM4-201ENST00000228437 RPL6Q02878 288 aaKnown RBP14.11□□□□□ -0.15
PRDM4-201ENST00000228437 MFSD10Q14728 455 aa14.11□□□□□ -0.15
PRDM4-201ENST00000228437 XKR6Q5GH73 641 aa14.11□□□□□ -0.15
PRDM4-201ENST00000228437 ATXN7L2Q5T6C5 722 aaPredicted RBP14.11□□□□□ -0.15
PRDM4-201ENST00000228437 NATD1Q8N6N6 113 aa14.11□□□□□ -0.15
PRDM4-201ENST00000228437 YIPF7Q8N8F6 280 aa14.11□□□□□ -0.15
PRDM4-201ENST00000228437 PPIL3Q9H2H8 161 aaKnown RBP14.11□□□□□ -0.15
PRDM4-201ENST00000228437 MRM3Q9HC36 420 aaKnown RBP14.11□□□□□ -0.15
PRDM4-201ENST00000228437 C17orf102A2RUQ5 167 aa14.11□□□□□ -0.15
PRDM4-201ENST00000228437 CCNB2O95067 398 aa14.11□□□□□ -0.15
PRDM4-201ENST00000228437 NUDT7P0C024 238 aa14.11□□□□□ -0.15
PRDM4-201ENST00000228437 CAMK2BQ13554 666 aa14.11□□□□□ -0.15
PRDM4-201ENST00000228437 CDH18Q13634 790 aa14.11□□□□□ -0.15
PRDM4-201ENST00000228437 SETMARQ53H47 684 aaPredicted RBP14.11□□□□□ -0.15
PRDM4-201ENST00000228437 PM20D1Q6GTS8 502 aa14.11□□□□□ -0.15
PRDM4-201ENST00000228437 HMGN2P46Q86SG4 172 aa14.11□□□□□ -0.15
PRDM4-201ENST00000228437 OR4A15Q8NGL6 344 aa14.11□□□□□ -0.15
PRDM4-201ENST00000228437 ASZ1Q8WWH4 475 aa14.11□□□□□ -0.15
PRDM4-201ENST00000228437 GGHQ92820 318 aa14.11□□□□□ -0.15
PRDM4-201ENST00000228437 FAM105AQ9NUU6 356 aa14.11□□□□□ -0.15
PRDM4-201ENST00000228437 RNF181Q9P0P0 153 aa14.11□□□□□ -0.15
PRDM4-201ENST00000228437 DLGAP4Q9Y2H0 992 aa14.11□□□□□ -0.15
PRDM4-201ENST00000228437 NHSL1Q5SYE7 1610 aa14.11□□□□□ -0.15
PRDM4-201ENST00000228437 TMEM88BA6NKF7 163 aa14.11□□□□□ -0.15
PRDM4-201ENST00000228437 FADS2P1A8MWK0 482 aa14.11□□□□□ -0.15
PRDM4-201ENST00000228437 ISM1B1AKI9 464 aa14.11□□□□□ -0.15
PRDM4-201ENST00000228437 ZNF197O14709 1029 aa14.11□□□□□ -0.15
PRDM4-201ENST00000228437 THPOP40225 353 aa14.11□□□□□ -0.15
PRDM4-201ENST00000228437 RGS6P49758 472 aa14.11□□□□□ -0.15
PRDM4-201ENST00000228437 ZMYND11Q15326 602 aa14.11□□□□□ -0.15
PRDM4-201ENST00000228437 VARS2Q5ST30 1063 aaKnown RBP14.11□□□□□ -0.15
PRDM4-201ENST00000228437 PIK3R6Q5UE93 754 aa14.11□□□□□ -0.15
PRDM4-201ENST00000228437 TPT1P8Q9HAU6 139 aa14.11□□□□□ -0.15
PRDM4-201ENST00000228437 PRDM5Q9NQX1 630 aaPredicted RBP14.11□□□□□ -0.15
PRDM4-201ENST00000228437 HTR3AP46098 478 aa14.1□□□□□ -0.15
PRDM4-201ENST00000228437 PGFP49763 221 aa14.1□□□□□ -0.15
PRDM4-201ENST00000228437 CRISP3P54108 245 aa14.1□□□□□ -0.15
PRDM4-201ENST00000228437 CDC42EP1Q00587 391 aa14.1□□□□□ -0.15
PRDM4-201ENST00000228437 TAF10Q12962 218 aa14.1□□□□□ -0.15
PRDM4-201ENST00000228437 BHLHB9Q6PI77 547 aa14.1□□□□□ -0.15
PRDM4-201ENST00000228437 GLCCI1Q86VQ1 547 aa14.1□□□□□ -0.15
PRDM4-201ENST00000228437 GALNT13Q8IUC8 556 aa14.1□□□□□ -0.15
PRDM4-201ENST00000228437 PHYKPLQ8IUZ5 450 aa14.1□□□□□ -0.15
PRDM4-201ENST00000228437 OR4K1Q8NGD4 311 aa14.1□□□□□ -0.15
PRDM4-201ENST00000228437 CHIAQ9BZP6 476 aa14.1□□□□□ -0.15
PRDM4-201ENST00000228437 FAM83DQ9H4H8 585 aa14.1□□□□□ -0.15
PRDM4-201ENST00000228437 RBPJLQ9UBG7 517 aa14.1□□□□□ -0.15
PRDM4-201ENST00000228437 RABL2AQ9UBK7 228 aaPredicted RBP14.1□□□□□ -0.15
PRDM4-201ENST00000228437 TRPC4Q9UBN4 977 aa14.1□□□□□ -0.15
PRDM4-201ENST00000228437 SSNA1O43805 119 aa14.1□□□□□ -0.15
PRDM4-201ENST00000228437 ALX3O95076 343 aa14.1□□□□□ -0.15
PRDM4-201ENST00000228437 NPPAP01160 153 aa14.1□□□□□ -0.15
PRDM4-201ENST00000228437 PTNP21246 168 aa14.1□□□□□ -0.15
PRDM4-201ENST00000228437 PIK3CBP42338 1070 aa14.1□□□□□ -0.15
PRDM4-201ENST00000228437 RAB8AP61006 207 aa14.1□□□□□ -0.15
PRDM4-201ENST00000228437 BCL2L1Q07817 233 aa14.1□□□□□ -0.15
PRDM4-201ENST00000228437 VMACQ2NL98 169 aa14.1□□□□□ -0.15
PRDM4-201ENST00000228437 PROX2Q3B8N5 592 aa14.1□□□□□ -0.15
PRDM4-201ENST00000228437 CTXN3Q4LDR2 81 aa14.1□□□□□ -0.15
PRDM4-201ENST00000228437 KLHL12Q53G59 568 aa14.1□□□□□ -0.15
PRDM4-201ENST00000228437 AQP11Q8NBQ7 271 aa14.1□□□□□ -0.15
PRDM4-201ENST00000228437 CDADC1Q9BWV3 514 aa14.1□□□□□ -0.15
PRDM4-201ENST00000228437 MED28Q9H204 178 aa14.1□□□□□ -0.15
PRDM4-201ENST00000228437 ING4Q9UNL4 249 aa14.1□□□□□ -0.15
PRDM4-201ENST00000228437 CLCA1A8K7I4 914 aa14.1□□□□□ -0.15
PRDM4-201ENST00000228437 MANBAO00462 879 aa14.1□□□□□ -0.15
PRDM4-201ENST00000228437 STX16O14662 325 aa14.1□□□□□ -0.15
PRDM4-201ENST00000228437 TALDO1P37837 337 aa14.1□□□□□ -0.15
PRDM4-201ENST00000228437 ABRQ12979 859 aa14.1□□□□□ -0.15
PRDM4-201ENST00000228437 SEMA3BQ13214 749 aa14.1□□□□□ -0.15
PRDM4-201ENST00000228437 CHIT1Q13231 466 aa14.1□□□□□ -0.15
PRDM4-201ENST00000228437 HKDC1Q2TB90 917 aa14.1□□□□□ -0.15
PRDM4-201ENST00000228437 UBE2R2Q712K3 238 aaPredicted RBP14.1□□□□□ -0.15
PRDM4-201ENST00000228437 ZSWIM9Q86XI8 627 aa14.1□□□□□ -0.15
PRDM4-201ENST00000228437 PPTC7Q8NI37 304 aa14.1□□□□□ -0.15
PRDM4-201ENST00000228437 PIGKQ92643 395 aa14.1□□□□□ -0.15
PRDM4-201ENST00000228437 GFRA2O00451 464 aa14.09□□□□□ -0.15
PRDM4-201ENST00000228437 PLD2O14939 933 aa14.09□□□□□ -0.15
PRDM4-201ENST00000228437 GADD45GO95257 159 aa14.09□□□□□ -0.15
PRDM4-201ENST00000228437 CYP2A7P20853 494 aa14.09□□□□□ -0.15
PRDM4-201ENST00000228437 KCNQ1P51787 676 aa14.09□□□□□ -0.15
PRDM4-201ENST00000228437 ATP13A5Q4VNC0 1218 aa14.09□□□□□ -0.15
PRDM4-201ENST00000228437 GPAT3Q53EU6 434 aa14.09□□□□□ -0.15
PRDM4-201ENST00000228437 CPTPQ5TA50 214 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms