RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 BPIFB1Q8TDL5 484 aa13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 IL12RB2Q99665 862 aa13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 PCDHGA11Q9Y5H2 935 aa13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 PEX16Q9Y5Y5 336 aa13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 PLOD2O00469 737 aa13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 WNT9AO14904 365 aa13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 ZNF16P17020 682 aaPredicted RBP13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 ADH7P40394 386 aa13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 LRP8Q14114 963 aa13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 PDCD4Q53EL6 469 aaKnown RBP13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 SLC6A15Q9H2J7 730 aa13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 DKK3Q9UBP4 350 aa13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 PCDHGA10Q9Y5H3 936 aa13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 INPPL1O15357 1258 aa13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 HK1P19367 917 aa13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 PHF19Q5T6S3 580 aa13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 KIAA0930Q6ICG6 404 aaPredicted RBP13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 EPGNQ6UW88 154 aa13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 KLHL36Q8N4N3 616 aa13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 JAGN1Q8N5M9 183 aa13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 DNAJA4Q8WW22 397 aaPredicted RBP13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 CNDP2Q96KP4 475 aaKnown RBP13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 MAN2B2Q9Y2E5 1009 aa13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 TEX264Q9Y6I9 313 aa13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 A0A0G2JLL6 359 aaPredicted RBP13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 FEZF1A0PJY2 475 aa13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 GNRH1P01148 92 aa13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 FSHRP23945 695 aa13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 DIO3P55073 304 aa13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 ARHGAP1Q07960 439 aa13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 SPIN3Q5JUX0 258 aa13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 TPRG1LQ5T0D9 272 aa13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 THOC7Q6I9Y2 204 aaKnown RBP13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 GRASPQ7Z6J2 395 aaPredicted RBP13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 PRRT2Q7Z6L0 340 aaPredicted RBP13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 PDSS2Q86YH6 399 aa13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 RASGRP3Q8IV61 690 aa13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 TP53INP2Q8IXH6 220 aa13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 FCRL5Q96RD9 977 aa13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 WDR77Q9BQA1 342 aaPredicted RBP13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 FLRT1Q9NZU1 646 aa13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 PLEKHA6Q9Y2H5 1048 aa13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 IGKV6D-41A0A0C4DH26 115 aa13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 ZNF878C9JN71 531 aa13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 SYN3O14994 580 aa13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 PRPS2P11908 318 aa13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 FNTBP49356 437 aa13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 STK19P49842 368 aaPredicted RBP13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 CRISP3P54108 245 aa13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 RFTN2Q52LD8 501 aaPredicted RBP13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 WDR26Q9H7D7 661 aa13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 M0QX08 132 aa13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 PLSCR1O15162 318 aa13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 REM1O75628 298 aa13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 ZNF20P17024 532 aa13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 GRK5P34947 590 aa13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 AP1S1P61966 158 aa13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 RPS26P62854 115 aaKnown RBP13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 OC90Q02509 493 aaPredicted RBP13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 FAM46DQ8NEK8 389 aa13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 C12orf43Q96C57 262 aaKnown RBP13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 ASB9Q96DX5 294 aa13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 DPH2Q9BQC3 489 aaPredicted RBP13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 DNAJC5Q9H3Z4 198 aa13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 MS4A12Q9NXJ0 267 aa13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 LTN1O94822 1766 aa13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 CARNS1A5YM72 827 aa13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 DNAJA1P31689 397 aaKnown RBP13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 MPIP34949 423 aa13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 ANKDD1AQ495B1 522 aa13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 MLIPQ5VWP3 458 aa13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 FAM43BQ6ZT52 329 aaPredicted RBP13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 TXNDC5Q8NBS9 432 aaKnown RBP13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 DGAT2Q96PD7 388 aa13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 TMEM109Q9BVC6 243 aa13.23□□□□□ -0.29
TGFBR3-201ENST00000212355 FAM170BA6NMN3 283 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 C11orf98E9PRG8 122 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 PRAMEF12O95522 483 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 ZNF182P17025 639 aaPredicted RBP13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 MATN1P21941 496 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 HSD11B1P28845 292 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 SLC18A1P54219 525 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 NFE2L1Q14494 772 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 MS4A13Q5J8X5 152 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 GALNT7Q86SF2 657 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 ZNF101Q8IZC7 436 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 CLCA3PQ9Y6N3 262 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 MANBAO00462 879 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 ORC5O43913 435 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 NOGQ13253 232 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 SGCBQ16585 318 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 TTLL10Q6ZVT0 673 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 AMIGO3Q86WK7 504 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 C1orf216Q8TAB5 229 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 ZNF641Q96N77 438 aaPredicted RBP13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 RDH12Q96NR8 316 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 ZNF317Q96PQ6 595 aaPredicted RBP13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 GTPBP2Q9BX10 602 aaKnown RBP13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 ZBTB26Q9HCK0 441 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 PTTG2Q9NZH5 202 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms