RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 EEDO75530 441 aaKnown RBP18.94■□□□□ 0.62
TNFRSF1A-201ENST00000162749 PEX2P28328 305 aa18.94■□□□□ 0.62
TNFRSF1A-201ENST00000162749 PKLRP30613 574 aa18.94■□□□□ 0.62
TNFRSF1A-201ENST00000162749 SFT2D3Q587I9 215 aa18.94■□□□□ 0.62
TNFRSF1A-201ENST00000162749 NRROSQ86YC3 692 aa18.94■□□□□ 0.62
TNFRSF1A-201ENST00000162749 PDSS2Q86YH6 399 aa18.94■□□□□ 0.62
TNFRSF1A-201ENST00000162749 C11orf24Q96F05 449 aaPredicted RBP18.94■□□□□ 0.62
TNFRSF1A-201ENST00000162749 RAB11FIP5Q9BXF6 653 aa18.94■□□□□ 0.62
TNFRSF1A-201ENST00000162749 CUEDC1Q9NWM3 386 aaPredicted RBP18.94■□□□□ 0.62
TNFRSF1A-201ENST00000162749 ICKQ9UPZ9 632 aa18.94■□□□□ 0.62
TNFRSF1A-201ENST00000162749 TP53BP1Q12888 1972 aaPredicted RBP18.94■□□□□ 0.62
TNFRSF1A-201ENST00000162749 DPPA5A6NC42 116 aa18.94■□□□□ 0.62
TNFRSF1A-201ENST00000162749 FXYD1O00168 92 aa18.94■□□□□ 0.62
TNFRSF1A-201ENST00000162749 ACPPP15309 386 aa18.94■□□□□ 0.62
TNFRSF1A-201ENST00000162749 SDC1P18827 310 aa18.94■□□□□ 0.62
TNFRSF1A-201ENST00000162749 TACR1P25103 407 aa18.94■□□□□ 0.62
TNFRSF1A-201ENST00000162749 LAPTM5Q13571 262 aa18.94■□□□□ 0.62
TNFRSF1A-201ENST00000162749 TLR1Q15399 786 aa18.94■□□□□ 0.62
TNFRSF1A-201ENST00000162749 PAGE3Q5JUK9 113 aa18.94■□□□□ 0.62
TNFRSF1A-201ENST00000162749 C10orf62Q5T681 223 aaPredicted RBP18.94■□□□□ 0.62
TNFRSF1A-201ENST00000162749 TMEM154Q6P9G4 183 aa18.94■□□□□ 0.62
TNFRSF1A-201ENST00000162749 PHACTR4Q8IZ21 702 aa18.94■□□□□ 0.62
TNFRSF1A-201ENST00000162749 GJD3Q8N144 294 aa18.94■□□□□ 0.62
TNFRSF1A-201ENST00000162749 KRTCAP2Q8N6L1 136 aa18.94■□□□□ 0.62
TNFRSF1A-201ENST00000162749 CLHC1Q8NHS4 586 aa18.94■□□□□ 0.62
TNFRSF1A-201ENST00000162749 FCRL1Q96LA6 429 aa18.94■□□□□ 0.62
TNFRSF1A-201ENST00000162749 SLC6A18Q96N87 628 aa18.94■□□□□ 0.62
TNFRSF1A-201ENST00000162749 TCEAL2Q9H3H9 227 aaPredicted RBP18.94■□□□□ 0.62
TNFRSF1A-201ENST00000162749 SPAG4Q9NPE6 437 aa18.94■□□□□ 0.62
TNFRSF1A-201ENST00000162749 ZNF624Q9P2J8 865 aaPredicted RBP18.94■□□□□ 0.62
TNFRSF1A-201ENST00000162749 KLF15Q9UIH9 416 aa18.94■□□□□ 0.62
TNFRSF1A-201ENST00000162749 CROTQ9UKG9 612 aa18.94■□□□□ 0.62
TNFRSF1A-201ENST00000162749 CASQ2O14958 399 aaPredicted RBP18.93■□□□□ 0.62
TNFRSF1A-201ENST00000162749 F3P13726 295 aa18.93■□□□□ 0.62
TNFRSF1A-201ENST00000162749 ME2P23368 584 aa18.93■□□□□ 0.62
TNFRSF1A-201ENST00000162749 RPS9P46781 194 aaKnown RBP18.93■□□□□ 0.62
TNFRSF1A-201ENST00000162749 RPS13P62277 151 aaKnown RBP18.93■□□□□ 0.62
TNFRSF1A-201ENST00000162749 EIF2B5Q13144 721 aaKnown RBP18.93■□□□□ 0.62
TNFRSF1A-201ENST00000162749 FLOT2Q14254 428 aa18.93■□□□□ 0.62
TNFRSF1A-201ENST00000162749 HIST2H2ACQ16777 129 aaPredicted RBP18.93■□□□□ 0.62
TNFRSF1A-201ENST00000162749 HIST2H2AA3Q6FI13 130 aa18.93■□□□□ 0.62
TNFRSF1A-201ENST00000162749 NOXRED1Q6NXP6 359 aa18.93■□□□□ 0.62
TNFRSF1A-201ENST00000162749 OR2L8Q8NGY9 312 aa18.93■□□□□ 0.62
TNFRSF1A-201ENST00000162749 GPATCH1Q9BRR8 931 aaKnown RBP18.93■□□□□ 0.62
TNFRSF1A-201ENST00000162749 DPY30Q9C005 99 aa18.93■□□□□ 0.62
TNFRSF1A-201ENST00000162749 IL1RL2Q9HB29 575 aa18.93■□□□□ 0.62
TNFRSF1A-201ENST00000162749 INVSQ9Y283 1065 aa18.93■□□□□ 0.62
TNFRSF1A-201ENST00000162749 COLEC10Q9Y6Z7 277 aa18.93■□□□□ 0.62
TNFRSF1A-201ENST00000162749 ZDBF2Q9HCK1 2354 aa18.93■□□□□ 0.62
TNFRSF1A-201ENST00000162749 DYTNA2CJ06 578 aa18.93■□□□□ 0.62
TNFRSF1A-201ENST00000162749 ACOT8O14734 319 aa18.93■□□□□ 0.62
TNFRSF1A-201ENST00000162749 NDUFS2O75306 463 aa18.93■□□□□ 0.62
TNFRSF1A-201ENST00000162749 SH3BGRLO75368 114 aa18.93■□□□□ 0.62
TNFRSF1A-201ENST00000162749 DCNP07585 359 aaKnown RBP18.93■□□□□ 0.62
TNFRSF1A-201ENST00000162749 PRPS2P11908 318 aa18.93■□□□□ 0.62
TNFRSF1A-201ENST00000162749 MAPK1P28482 360 aa18.93■□□□□ 0.62
TNFRSF1A-201ENST00000162749 ILF3Q12906 894 aaKnown RBP eCLIP18.93■□□□□ 0.62
TNFRSF1A-201ENST00000162749 FZD2Q14332 565 aa18.93■□□□□ 0.62
TNFRSF1A-201ENST00000162749 TMIGD1Q6UXZ0 262 aa18.93■□□□□ 0.62
TNFRSF1A-201ENST00000162749 CAMKK1Q8N5S9 505 aa18.93■□□□□ 0.62
TNFRSF1A-201ENST00000162749 DEFB119Q8N690 84 aa18.93■□□□□ 0.62
TNFRSF1A-201ENST00000162749 ABHD11Q8NFV4 315 aa18.93■□□□□ 0.62
TNFRSF1A-201ENST00000162749 OR2A1Q8NGT9 310 aa18.93■□□□□ 0.62
TNFRSF1A-201ENST00000162749 KIR3DX1Q9H7L2 352 aa18.93■□□□□ 0.62
TNFRSF1A-201ENST00000162749 THEGQ9P2T0 379 aa18.93■□□□□ 0.62
TNFRSF1A-201ENST00000162749 MUTYHQ9UIF7 546 aa18.93■□□□□ 0.62
TNFRSF1A-201ENST00000162749 LEF1Q9UJU2 399 aaPredicted RBP18.93■□□□□ 0.62
TNFRSF1A-201ENST00000162749 FOXE1O00358 373 aaPredicted RBP18.92■□□□□ 0.62
TNFRSF1A-201ENST00000162749 TNFP01375 233 aa18.92■□□□□ 0.62
TNFRSF1A-201ENST00000162749 DGKQP52824 942 aa18.92■□□□□ 0.62
TNFRSF1A-201ENST00000162749 ZNF542PQ5EBM4 170 aa18.92■□□□□ 0.62
TNFRSF1A-201ENST00000162749 LPCAT2Q7L5N7 544 aa18.92■□□□□ 0.62
TNFRSF1A-201ENST00000162749 GLB1L3Q8NCI6 653 aaPredicted RBP18.92■□□□□ 0.62
TNFRSF1A-201ENST00000162749 FAM156AQ8NDB6 213 aa18.92■□□□□ 0.62
TNFRSF1A-201ENST00000162749 METTL2AQ96IZ6 378 aaKnown RBP18.92■□□□□ 0.62
TNFRSF1A-201ENST00000162749 TSSK3Q96PN8 268 aa18.92■□□□□ 0.62
TNFRSF1A-201ENST00000162749 KLHL4Q9C0H6 718 aa18.92■□□□□ 0.62
TNFRSF1A-201ENST00000162749 CLMPQ9H6B4 373 aa18.92■□□□□ 0.62
TNFRSF1A-201ENST00000162749 DMRT3Q9NQL9 472 aa18.92■□□□□ 0.62
TNFRSF1A-201ENST00000162749 AASDHPPTQ9NRN7 309 aa18.92■□□□□ 0.62
TNFRSF1A-201ENST00000162749 ADA2Q9NZK5 511 aa18.92■□□□□ 0.62
TNFRSF1A-201ENST00000162749 SIT1Q9Y3P8 196 aa18.92■□□□□ 0.62
TNFRSF1A-201ENST00000162749 THADAQ6YHU6 1953 aa18.92■□□□□ 0.62
TNFRSF1A-201ENST00000162749 METTL12A8MUP2 240 aa18.92■□□□□ 0.62
TNFRSF1A-201ENST00000162749 BCAS2O75934 225 aaPredicted RBP18.92■□□□□ 0.62
TNFRSF1A-201ENST00000162749 LINGO3P0C6S8 592 aa18.92■□□□□ 0.62
TNFRSF1A-201ENST00000162749 MRPS22P82650 360 aaKnown RBP18.92■□□□□ 0.62
TNFRSF1A-201ENST00000162749 ACSM2AQ08AH3 577 aa18.92■□□□□ 0.62
TNFRSF1A-201ENST00000162749 TRIP10Q15642 601 aa18.92■□□□□ 0.62
TNFRSF1A-201ENST00000162749 FAM174BQ3ZCQ3 159 aa18.92■□□□□ 0.62
TNFRSF1A-201ENST00000162749 ACSM2BQ68CK6 577 aa18.92■□□□□ 0.62
TNFRSF1A-201ENST00000162749 GPBAR1Q8TDU6 330 aa18.92■□□□□ 0.62
TNFRSF1A-201ENST00000162749 UBE2E3Q969T4 207 aa18.92■□□□□ 0.62
TNFRSF1A-201ENST00000162749 LRRC58Q96CX6 371 aa18.92■□□□□ 0.62
TNFRSF1A-201ENST00000162749 KLHDC7BQ96G42 594 aa18.92■□□□□ 0.62
TNFRSF1A-201ENST00000162749 EGLN2Q96KS0 407 aa18.92■□□□□ 0.62
TNFRSF1A-201ENST00000162749 EBPLQ9BY08 206 aa18.92■□□□□ 0.62
TNFRSF1A-201ENST00000162749 PELI2Q9HAT8 420 aa18.92■□□□□ 0.62
TNFRSF1A-201ENST00000162749 SLAMF8Q9P0V8 285 aa18.92■□□□□ 0.62
TNFRSF1A-201ENST00000162749 TSC22D4Q9Y3Q8 395 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms