RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 OR2A25A4D2G3 310 aa16.23■□□□□ 0.19
CTDP1-201ENST00000075430 ZNF7P17097 686 aaPredicted RBP16.23■□□□□ 0.19
CTDP1-201ENST00000075430 RYKP34925 604 aa16.23■□□□□ 0.19
CTDP1-201ENST00000075430 NFE2L1Q14494 772 aa16.23■□□□□ 0.19
CTDP1-201ENST00000075430 PTCHD3Q3KNS1 767 aa16.23■□□□□ 0.19
CTDP1-201ENST00000075430 LEXMQ3ZCV2 418 aa16.23■□□□□ 0.19
CTDP1-201ENST00000075430 IRAK1BP1Q5VVH5 260 aa16.23■□□□□ 0.19
CTDP1-201ENST00000075430 PRSS55Q6UWB4 352 aaPredicted RBP16.23■□□□□ 0.19
CTDP1-201ENST00000075430 GGHQ92820 318 aa16.23■□□□□ 0.19
CTDP1-201ENST00000075430 ADGRE3Q9BY15 652 aa16.23■□□□□ 0.19
CTDP1-201ENST00000075430 LINC00597Q9H2U6 94 aa16.23■□□□□ 0.19
CTDP1-201ENST00000075430 FBXO8Q9NRD0 319 aa16.23■□□□□ 0.19
CTDP1-201ENST00000075430 NYNRINQ9P2P1 1898 aaKnown RBP16.23■□□□□ 0.19
CTDP1-201ENST00000075430 CKAP5Q14008 2032 aa16.22■□□□□ 0.19
CTDP1-201ENST00000075430 METTL15A6NJ78 407 aa16.22■□□□□ 0.19
CTDP1-201ENST00000075430 LAMP1P11279 417 aa16.22■□□□□ 0.19
CTDP1-201ENST00000075430 FPR1P21462 350 aa16.22■□□□□ 0.19
CTDP1-201ENST00000075430 HOXD9P28356 352 aaPredicted RBP16.22■□□□□ 0.19
CTDP1-201ENST00000075430 HOXC13P31276 330 aa16.22■□□□□ 0.19
CTDP1-201ENST00000075430 TGFBR2P37173 567 aa16.22■□□□□ 0.19
CTDP1-201ENST00000075430 CAV3P56539 151 aa16.22■□□□□ 0.19
CTDP1-201ENST00000075430 DSC3Q14574 896 aa16.22■□□□□ 0.19
CTDP1-201ENST00000075430 HKDC1Q2TB90 917 aa16.22■□□□□ 0.19
CTDP1-201ENST00000075430 PARP15Q460N3 678 aa16.22■□□□□ 0.19
CTDP1-201ENST00000075430 ANKS3Q6ZW76 656 aa16.22■□□□□ 0.19
CTDP1-201ENST00000075430 C2orf73Q8N5S3 287 aaPredicted RBP16.22■□□□□ 0.19
CTDP1-201ENST00000075430 NIPSNAP1Q9BPW8 284 aa16.22■□□□□ 0.19
CTDP1-201ENST00000075430 DNAJC27Q9NZQ0 273 aa16.22■□□□□ 0.19
CTDP1-201ENST00000075430 MAP4K5Q9Y4K4 846 aa16.22■□□□□ 0.19
CTDP1-201ENST00000075430 H3BN98 237 aa16.22■□□□□ 0.19
CTDP1-201ENST00000075430 SUV39H1O43463 412 aa16.22■□□□□ 0.19
CTDP1-201ENST00000075430 IGFBP1P08833 259 aaPredicted RBP16.22■□□□□ 0.19
CTDP1-201ENST00000075430 PTNP21246 168 aa16.22■□□□□ 0.19
CTDP1-201ENST00000075430 SOX6P35712 828 aa16.22■□□□□ 0.19
CTDP1-201ENST00000075430 SUOXP51687 545 aa16.22■□□□□ 0.19
CTDP1-201ENST00000075430 ELP6Q0PNE2 266 aa16.22■□□□□ 0.19
CTDP1-201ENST00000075430 GRIK2Q13002 908 aa16.22■□□□□ 0.19
CTDP1-201ENST00000075430 LYPD8Q6UX82 237 aa16.22■□□□□ 0.19
CTDP1-201ENST00000075430 AADATQ8N5Z0 425 aa16.22■□□□□ 0.19
CTDP1-201ENST00000075430 LILRB4Q8NHJ6 448 aa16.22■□□□□ 0.19
CTDP1-201ENST00000075430 GPR151Q8TDV0 419 aa16.22■□□□□ 0.19
CTDP1-201ENST00000075430 VPS35Q96QK1 796 aa16.22■□□□□ 0.19
CTDP1-201ENST00000075430 MMP27Q9H306 513 aa16.22■□□□□ 0.19
CTDP1-201ENST00000075430 THG1LQ9NWX6 298 aaKnown RBP16.22■□□□□ 0.19
CTDP1-201ENST00000075430 TAS2R9Q9NYW1 312 aa16.22■□□□□ 0.19
CTDP1-201ENST00000075430 MUTYHQ9UIF7 546 aa16.22■□□□□ 0.19
CTDP1-201ENST00000075430 SLC16A6O15403 523 aa16.22■□□□□ 0.19
CTDP1-201ENST00000075430 CLDN9O95484 217 aa16.22■□□□□ 0.19
CTDP1-201ENST00000075430 HOXB8P17481 243 aaPredicted RBP16.22■□□□□ 0.19
CTDP1-201ENST00000075430 SDC1P18827 310 aa16.22■□□□□ 0.19
CTDP1-201ENST00000075430 CBX2Q14781 532 aaPredicted RBP16.22■□□□□ 0.19
CTDP1-201ENST00000075430 BCL2A1Q16548 175 aa16.22■□□□□ 0.19
CTDP1-201ENST00000075430 LRRC26Q2I0M4 334 aa16.22■□□□□ 0.19
CTDP1-201ENST00000075430 AFMIDQ63HM1 303 aa16.22■□□□□ 0.19
CTDP1-201ENST00000075430 SYCE2Q6PIF2 218 aa16.22■□□□□ 0.19
CTDP1-201ENST00000075430 PRSS48Q7RTY5 328 aa16.22■□□□□ 0.19
CTDP1-201ENST00000075430 SERINC5Q86VE9 423 aa16.22■□□□□ 0.19
CTDP1-201ENST00000075430 BEND7Q8N7W2 519 aaPredicted RBP16.22■□□□□ 0.19
CTDP1-201ENST00000075430 EID2BQ96D98 161 aa16.22■□□□□ 0.19
CTDP1-201ENST00000075430 PHOX2BQ99453 314 aa16.22■□□□□ 0.19
CTDP1-201ENST00000075430 RAB23Q9ULC3 237 aa16.22■□□□□ 0.19
CTDP1-201ENST00000075430 FZD4Q9ULV1 537 aa16.22■□□□□ 0.19
CTDP1-201ENST00000075430 SYNDIG1LA6NDD5 238 aa16.21■□□□□ 0.19
CTDP1-201ENST00000075430 MAGEB17A8MXT2 336 aa16.21■□□□□ 0.19
CTDP1-201ENST00000075430 PBLDP30039 288 aaPredicted RBP16.21■□□□□ 0.19
CTDP1-201ENST00000075430 PRIM2P49643 509 aa16.21■□□□□ 0.19
CTDP1-201ENST00000075430 CLCN7P51798 805 aa16.21■□□□□ 0.19
CTDP1-201ENST00000075430 CHRNA6Q15825 494 aa16.21■□□□□ 0.19
CTDP1-201ENST00000075430 TSPAN33Q86UF1 283 aa16.21■□□□□ 0.19
CTDP1-201ENST00000075430 CELF5Q8N6W0 485 aaKnown RBP16.21■□□□□ 0.19
CTDP1-201ENST00000075430 ASCC1Q8N9N2 400 aaKnown RBP16.21■□□□□ 0.19
CTDP1-201ENST00000075430 KCNJ9Q92806 393 aa16.21■□□□□ 0.19
CTDP1-201ENST00000075430 SLC39A13Q96H72 371 aa16.21■□□□□ 0.19
CTDP1-201ENST00000075430 RDH12Q96NR8 316 aa16.21■□□□□ 0.19
CTDP1-201ENST00000075430 BTBD2Q9BX70 525 aa16.21■□□□□ 0.19
CTDP1-201ENST00000075430 FBXO44Q9H4M3 255 aa16.21■□□□□ 0.19
CTDP1-201ENST00000075430 TEKT2Q9UIF3 430 aa16.21■□□□□ 0.19
CTDP1-201ENST00000075430 DHRS7Q9Y394 339 aa16.21■□□□□ 0.19
CTDP1-201ENST00000075430 TRAV19A0A0A6YYK7 116 aa16.21■□□□□ 0.19
CTDP1-201ENST00000075430 SLC28A1O00337 649 aa16.21■□□□□ 0.19
CTDP1-201ENST00000075430 DBPQ10586 325 aaPredicted RBP16.21■□□□□ 0.19
CTDP1-201ENST00000075430 NFE2Q16621 373 aaPredicted RBP16.21■□□□□ 0.19
CTDP1-201ENST00000075430 VMACQ2NL98 169 aa16.21■□□□□ 0.19
CTDP1-201ENST00000075430 CCDC58Q4VC31 144 aa16.21■□□□□ 0.19
CTDP1-201ENST00000075430 ZNF517Q6ZMY9 492 aaPredicted RBP16.21■□□□□ 0.19
CTDP1-201ENST00000075430 SNX20Q7Z614 316 aa16.21■□□□□ 0.19
CTDP1-201ENST00000075430 GPR150Q8NGU9 434 aa16.21■□□□□ 0.19
CTDP1-201ENST00000075430 DACT3Q96B18 629 aaPredicted RBP16.21■□□□□ 0.19
CTDP1-201ENST00000075430 CPPED1Q9BRF8 314 aaPredicted RBP16.21■□□□□ 0.19
CTDP1-201ENST00000075430 CD244Q9BZW8 370 aa16.21■□□□□ 0.19
CTDP1-201ENST00000075430 IL1RAPQ9NPH3 570 aa16.21■□□□□ 0.19
CTDP1-201ENST00000075430 TMEM161AQ9NX61 479 aa16.21■□□□□ 0.19
CTDP1-201ENST00000075430 SPASTQ9UBP0 616 aa16.21■□□□□ 0.19
CTDP1-201ENST00000075430 CLCA3PQ9Y6N3 262 aa16.21■□□□□ 0.19
CTDP1-201ENST00000075430 TMCC2O75069 709 aa16.2■□□□□ 0.18
CTDP1-201ENST00000075430 HIST1H2AGP0C0S8 130 aaPredicted RBP16.2■□□□□ 0.18
CTDP1-201ENST00000075430 HIST1H2ADP20671 130 aa16.2■□□□□ 0.18
CTDP1-201ENST00000075430 ABRQ12979 859 aa16.2■□□□□ 0.18
CTDP1-201ENST00000075430 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.2■□□□□ 0.18
CTDP1-201ENST00000075430 FAM131AQ6UXB0 335 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms