RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 CXCR2P25025 360 aa13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 AQP4P55087 323 aa13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 WNT3P56703 355 aa13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 TSTA3Q13630 321 aaPredicted RBP13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 MAP7Q14244 749 aa13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 DUOXA1Q1HG43 343 aa13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 TMEM92Q6UXU6 159 aa13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 TMIGD1Q6UXZ0 262 aa13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 TMEM132CQ8N3T6 1108 aa13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 ICA1LQ8NDH6 482 aa13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 ZNF548Q8NEK5 533 aaPredicted RBP13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 OR4K1Q8NGD4 311 aa13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 RPLP0P6Q8NHW5 317 aa13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 LRTOMTQ8WZ04 291 aa13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 NELL1Q92832 810 aa13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 POP5Q969H6 163 aaKnown RBP13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 RPF2Q9H7B2 306 aaKnown RBP13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 MVB12BQ9H7P6 319 aa13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 KAT8Q9H7Z6 458 aaKnown RBP13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 PLAGL1Q9UM63 463 aa13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 SUFUQ9UMX1 484 aa13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 PCDHB14Q9Y5E9 798 aa13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 GMEB1Q9Y692 573 aa13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 FAM220BPB1ANY3 271 aa13.77□□□□□ -0.21
RTFDC1-201ENST00000023939 SCAMP2O15127 329 aaKnown RBP13.77□□□□□ -0.21
RTFDC1-201ENST00000023939 SLC31A1O15431 190 aa13.77□□□□□ -0.21
RTFDC1-201ENST00000023939 MBTPS2O43462 519 aa13.77□□□□□ -0.21
RTFDC1-201ENST00000023939 PTX3P26022 381 aaPredicted RBP13.77□□□□□ -0.21
RTFDC1-201ENST00000023939 RPL10P27635 214 aaKnown RBP13.77□□□□□ -0.21
RTFDC1-201ENST00000023939 MAT2AP31153 395 aaKnown RBP13.77□□□□□ -0.21
RTFDC1-201ENST00000023939 HSPA13P48723 471 aa13.77□□□□□ -0.21
RTFDC1-201ENST00000023939 GZMMP51124 257 aa13.77□□□□□ -0.21
RTFDC1-201ENST00000023939 KLC1Q07866 573 aa13.77□□□□□ -0.21
RTFDC1-201ENST00000023939 LRRC74AQ0VAA2 488 aa13.77□□□□□ -0.21
RTFDC1-201ENST00000023939 BLMHQ13867 455 aa13.77□□□□□ -0.21
RTFDC1-201ENST00000023939 MLF2Q15773 248 aaPredicted RBP13.77□□□□□ -0.21
RTFDC1-201ENST00000023939 PGS1Q32NB8 556 aa13.77□□□□□ -0.21
RTFDC1-201ENST00000023939 UAP1L1Q3KQV9 507 aa13.77□□□□□ -0.21
RTFDC1-201ENST00000023939 TBCELQ5QJ74 424 aa13.77□□□□□ -0.21
RTFDC1-201ENST00000023939 IER5LQ5T953 404 aa13.77□□□□□ -0.21
RTFDC1-201ENST00000023939 GLYATQ6IB77 296 aa13.77□□□□□ -0.21
RTFDC1-201ENST00000023939 ARMCX6Q7L4S7 300 aa13.77□□□□□ -0.21
RTFDC1-201ENST00000023939 METTL4Q8N3J2 472 aa13.77□□□□□ -0.21
RTFDC1-201ENST00000023939 DTWD1Q8N5C7 304 aa13.77□□□□□ -0.21
RTFDC1-201ENST00000023939 LMNTD1Q8N9Z9 388 aa13.77□□□□□ -0.21
RTFDC1-201ENST00000023939 OR2T12Q8NG77 320 aa13.77□□□□□ -0.21
RTFDC1-201ENST00000023939 COQ8BQ96D53 544 aa13.77□□□□□ -0.21
RTFDC1-201ENST00000023939 C12orf66Q96MD2 445 aa13.77□□□□□ -0.21
RTFDC1-201ENST00000023939 NSMCE2Q96MF7 247 aa13.77□□□□□ -0.21
RTFDC1-201ENST00000023939 GBP5Q96PP8 586 aa13.77□□□□□ -0.21
RTFDC1-201ENST00000023939 THUMPD3Q9BV44 507 aaKnown RBP13.77□□□□□ -0.21
RTFDC1-201ENST00000023939 REXO4Q9GZR2 422 aaKnown RBP13.77□□□□□ -0.21
RTFDC1-201ENST00000023939 SPNS1Q9H2V7 528 aa13.77□□□□□ -0.21
RTFDC1-201ENST00000023939 VCXQ9H320 206 aa13.77□□□□□ -0.21
RTFDC1-201ENST00000023939 IKZF5Q9H5V7 419 aa13.77□□□□□ -0.21
RTFDC1-201ENST00000023939 SLC2A4RGQ9NR83 387 aa13.77□□□□□ -0.21
RTFDC1-201ENST00000023939 ATP6V1HQ9UI12 483 aa13.77□□□□□ -0.21
RTFDC1-201ENST00000023939 ANAPC2Q9UJX6 822 aa13.77□□□□□ -0.21
RTFDC1-201ENST00000023939 CDH23Q9H251 3354 aa13.77□□□□□ -0.21
RTFDC1-201ENST00000023939 LRRC72A6NJI9 287 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 RFXANKO14593 260 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 FPGTO14772 594 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 PCDH7O60245 1069 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 LRATO95237 230 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 APBB3O95704 486 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 IGLV3-19P01714 112 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 ANXA6P08133 673 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 MTHFD1P11586 935 aaKnown RBP13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 COX7A2P14406 83 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 ZNF26P17031 533 aaPredicted RBP13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 IGFBP4P22692 258 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 HPCAL1P37235 193 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 RAB28P51157 221 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 TPMTP51580 245 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 POLE2P56282 527 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 REEP5Q00765 189 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 NFATC4Q14934 902 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 CYP51A1Q16850 503 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 OR4F3Q6IEY1 312 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 HMBOX1Q6NT76 420 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 KIAA1324Q6UXG2 1013 aaKnown RBP13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 WASH2PQ6VEQ5 465 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 VN1R5Q7Z5H4 357 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 OR2L8Q8NGY9 312 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 FAM3CQ92520 227 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 GATA6Q92908 595 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 BIRC7Q96CA5 298 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 CAMK1GQ96NX5 476 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 PHF12Q96QT6 1004 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 OR2M4Q96R27 311 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 FERD3LQ96RJ6 166 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 PRPF18Q99633 342 aaKnown RBP13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 AIF1LQ9BQI0 150 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 INPP5KQ9BT40 448 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 PHF7Q9BWX1 381 aaPredicted RBP13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 FGF22Q9HCT0 170 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 FZD3Q9NPG1 666 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 AGPAT4Q9NRZ5 378 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 SLC6A13Q9NSD5 602 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms