RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 FBXO9Q9UK97 447 aaPredicted RBP13.35□□□□□ -0.27
SCARB2-227ENST00000640957 PCDHB5Q9Y5E4 795 aa13.35□□□□□ -0.27
SCARB2-227ENST00000640957 PEX16Q9Y5Y5 336 aa13.35□□□□□ -0.27
SCARB2-227ENST00000640957 A0A1B0GVC2 190 aa13.34□□□□□ -0.27
SCARB2-227ENST00000640957 A6NIN4 97 aa13.34□□□□□ -0.27
SCARB2-227ENST00000640957 TEX46H3BTG2 121 aa13.34□□□□□ -0.27
SCARB2-227ENST00000640957 OR7A17O14581 309 aa13.34□□□□□ -0.27
SCARB2-227ENST00000640957 CACNG3O60359 315 aa13.34□□□□□ -0.27
SCARB2-227ENST00000640957 F9P00740 461 aa13.34□□□□□ -0.27
SCARB2-227ENST00000640957 TP53P04637 393 aaPredicted RBP13.34□□□□□ -0.27
SCARB2-227ENST00000640957 ATXN1LP0C7T5 689 aaKnown RBP13.34□□□□□ -0.27
SCARB2-227ENST00000640957 JUNDP17535 347 aa13.34□□□□□ -0.27
SCARB2-227ENST00000640957 MYL9P24844 172 aa13.34□□□□□ -0.27
SCARB2-227ENST00000640957 HCAR3P49019 387 aa13.34□□□□□ -0.27
SCARB2-227ENST00000640957 RPL34P49207 117 aaKnown RBP13.34□□□□□ -0.27
SCARB2-227ENST00000640957 GTF2H2Q13888 395 aa13.34□□□□□ -0.27
SCARB2-227ENST00000640957 GANABQ14697 944 aaKnown RBP13.34□□□□□ -0.27
SCARB2-227ENST00000640957 FAM205BPQ63HN1 556 aa13.34□□□□□ -0.27
SCARB2-227ENST00000640957 KDM4DQ6B0I6 523 aa13.34□□□□□ -0.27
SCARB2-227ENST00000640957 GTF2H2CQ6P1K8 395 aa13.34□□□□□ -0.27
SCARB2-227ENST00000640957 PAQR6Q6TCH4 344 aa13.34□□□□□ -0.27
SCARB2-227ENST00000640957 TMPRSS11AQ6ZMR5 421 aa13.34□□□□□ -0.27
SCARB2-227ENST00000640957 ULK4Q96C45 1275 aa13.34□□□□□ -0.27
SCARB2-227ENST00000640957 SMARCD1Q96GM5 515 aa13.34□□□□□ -0.27
SCARB2-227ENST00000640957 MCCC1Q96RQ3 725 aaPredicted RBP13.34□□□□□ -0.27
SCARB2-227ENST00000640957 ASPNQ9BXN1 380 aa13.34□□□□□ -0.27
SCARB2-227ENST00000640957 IMPAD1Q9NX62 359 aa13.34□□□□□ -0.27
SCARB2-227ENST00000640957 NDRG4Q9ULP0 352 aaKnown RBP13.34□□□□□ -0.27
SCARB2-227ENST00000640957 NOS1APO75052 506 aaPredicted RBP13.34□□□□□ -0.27
SCARB2-227ENST00000640957 STAU1O95793 577 aaKnown RBP13.34□□□□□ -0.27
SCARB2-227ENST00000640957 PCSK1P29120 753 aa13.34□□□□□ -0.27
SCARB2-227ENST00000640957 SCNN1AP37088 669 aa13.34□□□□□ -0.27
SCARB2-227ENST00000640957 GPR15P49685 360 aa13.34□□□□□ -0.27
SCARB2-227ENST00000640957 RENBPP51606 427 aa13.34□□□□□ -0.27
SCARB2-227ENST00000640957 PARP15Q460N3 678 aa13.34□□□□□ -0.27
SCARB2-227ENST00000640957 PYDC2Q56P42 97 aa13.34□□□□□ -0.27
SCARB2-227ENST00000640957 CAPN13Q6MZZ7 669 aaPredicted RBP13.34□□□□□ -0.27
SCARB2-227ENST00000640957 FAM180BQ6P0A1 224 aa13.34□□□□□ -0.27
SCARB2-227ENST00000640957 GPR149Q86SP6 731 aa13.34□□□□□ -0.27
SCARB2-227ENST00000640957 GRAMD2AQ8IUY3 354 aa13.34□□□□□ -0.27
SCARB2-227ENST00000640957 CLECL1Q8IZS7 167 aa13.34□□□□□ -0.27
SCARB2-227ENST00000640957 DUSP12Q9UNI6 340 aa13.34□□□□□ -0.27
SCARB2-227ENST00000640957 HTTP42858 3142 aa13.34□□□□□ -0.27
SCARB2-227ENST00000640957 LTBP3Q9NS15 1303 aa13.34□□□□□ -0.27
SCARB2-227ENST00000640957 BRCA1P38398 1863 aaKnown RBP13.33□□□□□ -0.27
SCARB2-227ENST00000640957 ARL5CA6NH57 179 aa13.33□□□□□ -0.27
SCARB2-227ENST00000640957 I3L521 148 aa13.33□□□□□ -0.27
SCARB2-227ENST00000640957 J3KTA2 159 aa13.33□□□□□ -0.27
SCARB2-227ENST00000640957 SLITRK5O94991 958 aa13.33□□□□□ -0.27
SCARB2-227ENST00000640957 SCELO95171 688 aa13.33□□□□□ -0.27
SCARB2-227ENST00000640957 FABP3P05413 133 aa13.33□□□□□ -0.27
SCARB2-227ENST00000640957 OR1G1P47890 313 aa13.33□□□□□ -0.27
SCARB2-227ENST00000640957 IL2P60568 153 aa13.33□□□□□ -0.27
SCARB2-227ENST00000640957 SLC39A12Q504Y0 691 aa13.33□□□□□ -0.27
SCARB2-227ENST00000640957 YIF1BQ5BJH7 314 aa13.33□□□□□ -0.27
SCARB2-227ENST00000640957 INTS6LQ5JSJ4 861 aaKnown RBP13.33□□□□□ -0.27
SCARB2-227ENST00000640957 PIK3R6Q5UE93 754 aa13.33□□□□□ -0.27
SCARB2-227ENST00000640957 CCSAPQ6IQ19 270 aaPredicted RBP13.33□□□□□ -0.27
SCARB2-227ENST00000640957 ZNF605Q86T29 641 aa13.33□□□□□ -0.27
SCARB2-227ENST00000640957 SLC5A8Q8N695 610 aa13.33□□□□□ -0.27
SCARB2-227ENST00000640957 KBTBD8Q8NFY9 601 aa13.33□□□□□ -0.27
SCARB2-227ENST00000640957 NLGN4YQ8NFZ3 816 aaPredicted RBP13.33□□□□□ -0.27
SCARB2-227ENST00000640957 PARK7Q99497 189 aaKnown RBP13.33□□□□□ -0.27
SCARB2-227ENST00000640957 MGLLQ99685 303 aa13.33□□□□□ -0.27
SCARB2-227ENST00000640957 NIPSNAP1Q9BPW8 284 aa13.33□□□□□ -0.27
SCARB2-227ENST00000640957 MKRN2Q9H000 416 aaKnown RBP13.33□□□□□ -0.27
SCARB2-227ENST00000640957 SYTL2Q9HCH5 934 aa13.33□□□□□ -0.27
SCARB2-227ENST00000640957 SLC23A1Q9UHI7 598 aa13.33□□□□□ -0.27
SCARB2-227ENST00000640957 A0A0D9SEW6 157 aa13.33□□□□□ -0.28
SCARB2-227ENST00000640957 MROH6A6NGR9 719 aa13.33□□□□□ -0.28
SCARB2-227ENST00000640957 CAPN5O15484 640 aaPredicted RBP13.33□□□□□ -0.28
SCARB2-227ENST00000640957 ZNF780AO75290 641 aaPredicted RBP13.33□□□□□ -0.28
SCARB2-227ENST00000640957 AP2A2O94973 939 aa13.33□□□□□ -0.28
SCARB2-227ENST00000640957 IGFBP1P08833 259 aaPredicted RBP13.33□□□□□ -0.28
SCARB2-227ENST00000640957 S100A3P33764 101 aa13.33□□□□□ -0.28
SCARB2-227ENST00000640957 PBX3P40426 434 aa13.33□□□□□ -0.28
SCARB2-227ENST00000640957 TUBA1BP68363 451 aa13.33□□□□□ -0.28
SCARB2-227ENST00000640957 ELP6Q0PNE2 266 aa13.33□□□□□ -0.28
SCARB2-227ENST00000640957 ZNF235Q14590 738 aa13.33□□□□□ -0.28
SCARB2-227ENST00000640957 VEPH1Q14D04 833 aa13.33□□□□□ -0.28
SCARB2-227ENST00000640957 SLX4IPQ5VYV7 408 aa13.33□□□□□ -0.28
SCARB2-227ENST00000640957 TMIGD1Q6UXZ0 262 aa13.33□□□□□ -0.28
SCARB2-227ENST00000640957 TUBA1AQ71U36 451 aa13.33□□□□□ -0.28
SCARB2-227ENST00000640957 SNX20Q7Z614 316 aa13.33□□□□□ -0.28
SCARB2-227ENST00000640957 LRRTM3Q86VH5 581 aa13.33□□□□□ -0.28
SCARB2-227ENST00000640957 GPR65Q8IYL9 337 aa13.33□□□□□ -0.28
SCARB2-227ENST00000640957 OR8H3Q8N146 312 aa13.33□□□□□ -0.28
SCARB2-227ENST00000640957 KIAA1958Q8N8K9 716 aa13.33□□□□□ -0.28
SCARB2-227ENST00000640957 LPCAT1Q8NF37 534 aa13.33□□□□□ -0.28
SCARB2-227ENST00000640957 ANKK1Q8NFD2 765 aa13.33□□□□□ -0.28
SCARB2-227ENST00000640957 B3GNT7Q8NFL0 401 aa13.33□□□□□ -0.28
SCARB2-227ENST00000640957 OR6C4Q8NGE1 309 aa13.33□□□□□ -0.28
SCARB2-227ENST00000640957 MSANTD3Q96H12 275 aa13.33□□□□□ -0.28
SCARB2-227ENST00000640957 DIRAS2Q96HU8 199 aa13.33□□□□□ -0.28
SCARB2-227ENST00000640957 SMURF1Q9HCE7 757 aa13.33□□□□□ -0.28
SCARB2-227ENST00000640957 NLKQ9UBE8 527 aa13.33□□□□□ -0.28
SCARB2-227ENST00000640957 CRNNQ9UBG3 495 aaPredicted RBP13.33□□□□□ -0.28
SCARB2-227ENST00000640957 YARS2Q9Y2Z4 477 aaKnown RBP13.33□□□□□ -0.28
SCARB2-227ENST00000640957 SMIM35A0A1B0GVV1 85 aa13.33□□□□□ -0.28
SCARB2-227ENST00000640957 NT5C1B-RDH14C9J2C7 533 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms