RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 IMP3Q9NV31 184 aaKnown RBP13.2□□□□□ -0.3
HLA-C-210ENST00000640219 SYBUQ9NX95 663 aa13.2□□□□□ -0.3
HLA-C-210ENST00000640219 IL1RAPL1Q9NZN1 696 aa13.2□□□□□ -0.3
HLA-C-210ENST00000640219 MARCH4Q9P2E8 410 aaPredicted RBP13.2□□□□□ -0.3
HLA-C-210ENST00000640219 CTNNAL1Q9UBT7 734 aa13.2□□□□□ -0.3
HLA-C-210ENST00000640219 TCAF1Q9Y4C2 921 aa13.2□□□□□ -0.3
HLA-C-210ENST00000640219 IKBKGQ9Y6K9 419 aa13.2□□□□□ -0.3
HLA-C-210ENST00000640219 SNRNP200O75643 2136 aaKnown RBP13.19□□□□□ -0.3
HLA-C-210ENST00000640219 GOLGA8TH3BQL2 631 aa13.19□□□□□ -0.3
HLA-C-210ENST00000640219 PCDH17O14917 1159 aa13.19□□□□□ -0.3
HLA-C-210ENST00000640219 PSMD3O43242 534 aa13.19□□□□□ -0.3
HLA-C-210ENST00000640219 ZWINTO95229 277 aa13.19□□□□□ -0.3
HLA-C-210ENST00000640219 NMBRP28336 390 aa13.19□□□□□ -0.3
HLA-C-210ENST00000640219 PDHA2P29803 388 aa13.19□□□□□ -0.3
HLA-C-210ENST00000640219 MSH2P43246 934 aa13.19□□□□□ -0.3
HLA-C-210ENST00000640219 CSE1LP55060 971 aaKnown RBP13.19□□□□□ -0.3
HLA-C-210ENST00000640219 AIMP2Q13155 320 aaKnown RBP13.19□□□□□ -0.3
HLA-C-210ENST00000640219 TLR1Q15399 786 aa13.19□□□□□ -0.3
HLA-C-210ENST00000640219 RPE65Q16518 533 aa13.19□□□□□ -0.3
HLA-C-210ENST00000640219 CYP2A13Q16696 494 aa13.19□□□□□ -0.3
HLA-C-210ENST00000640219 ZNF789Q5FWF6 425 aa13.19□□□□□ -0.3
HLA-C-210ENST00000640219 AGAP7PQ5VUJ5 663 aa13.19□□□□□ -0.3
HLA-C-210ENST00000640219 GFRALQ6UXV0 394 aa13.19□□□□□ -0.3
HLA-C-210ENST00000640219 LINC00523Q86TU6 105 aa13.19□□□□□ -0.3
HLA-C-210ENST00000640219 CFAP206Q8IYR0 622 aa13.19□□□□□ -0.3
HLA-C-210ENST00000640219 CARFQ8N187 725 aa13.19□□□□□ -0.3
HLA-C-210ENST00000640219 LKAAEAR1Q8TD35 194 aa13.19□□□□□ -0.3
HLA-C-210ENST00000640219 FBF1Q8TES7 1133 aa13.19□□□□□ -0.3
HLA-C-210ENST00000640219 CHTF18Q8WVB6 975 aa13.19□□□□□ -0.3
HLA-C-210ENST00000640219 DCUN1D1Q96GG9 259 aa13.19□□□□□ -0.3
HLA-C-210ENST00000640219 C12orf66Q96MD2 445 aa13.19□□□□□ -0.3
HLA-C-210ENST00000640219 PPM1MQ96MI6 270 aa13.19□□□□□ -0.3
HLA-C-210ENST00000640219 AGAP4Q96P64 663 aa13.19□□□□□ -0.3
HLA-C-210ENST00000640219 C17orf62Q9BQA9 187 aa13.19□□□□□ -0.3
HLA-C-210ENST00000640219 SYTL2Q9HCH5 934 aa13.19□□□□□ -0.3
HLA-C-210ENST00000640219 ZDHHC3Q9NYG2 299 aa13.19□□□□□ -0.3
HLA-C-210ENST00000640219 GPN3Q9UHW5 284 aaPredicted RBP13.19□□□□□ -0.3
HLA-C-210ENST00000640219 SERTAD3Q9UJW9 196 aa13.19□□□□□ -0.3
HLA-C-210ENST00000640219 SLC12A4Q9UP95 1085 aa13.19□□□□□ -0.3
HLA-C-210ENST00000640219 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.18□□□□□ -0.3
HLA-C-210ENST00000640219 IQANK1A0A1B0GTG1 560 aa13.18□□□□□ -0.3
HLA-C-210ENST00000640219 OR6C74A6NCV1 312 aa13.18□□□□□ -0.3
HLA-C-210ENST00000640219 SLC9B1P1A6NJY1 282 aa13.18□□□□□ -0.3
HLA-C-210ENST00000640219 IQCF5A8MTL0 148 aa13.18□□□□□ -0.3
HLA-C-210ENST00000640219 H7C0S8 307 aa13.18□□□□□ -0.3
HLA-C-210ENST00000640219 C19orf84I3L1E1 186 aa13.18□□□□□ -0.3
HLA-C-210ENST00000640219 ZNF189O75820 626 aaPredicted RBP13.18□□□□□ -0.3
HLA-C-210ENST00000640219 FAM155BO75949 473 aa13.18□□□□□ -0.3
HLA-C-210ENST00000640219 HBQ1P09105 142 aa13.18□□□□□ -0.3
HLA-C-210ENST00000640219 ATP1B2P14415 290 aaPredicted RBP13.18□□□□□ -0.3
HLA-C-210ENST00000640219 PRLHRP49683 370 aa13.18□□□□□ -0.3
HLA-C-210ENST00000640219 TDGF1P3P51864 188 aa13.18□□□□□ -0.3
HLA-C-210ENST00000640219 KPNA2P52292 529 aaKnown RBP13.18□□□□□ -0.3
HLA-C-210ENST00000640219 ART1P52961 327 aa13.18□□□□□ -0.3
HLA-C-210ENST00000640219 TLE4Q04727 773 aa13.18□□□□□ -0.3
HLA-C-210ENST00000640219 CACNG1Q06432 222 aa13.18□□□□□ -0.3
HLA-C-210ENST00000640219 DMPKQ09013 629 aa13.18□□□□□ -0.3
HLA-C-210ENST00000640219 KCNJ11Q14654 390 aa13.18□□□□□ -0.3
HLA-C-210ENST00000640219 BCL7AQ4VC05 210 aa13.18□□□□□ -0.3
HLA-C-210ENST00000640219 ZNF385CQ66K41 422 aaPredicted RBP13.18□□□□□ -0.3
HLA-C-210ENST00000640219 ZNF324BQ6AW86 544 aaPredicted RBP13.18□□□□□ -0.3
HLA-C-210ENST00000640219 TMEM207Q6UWW9 146 aa13.18□□□□□ -0.3
HLA-C-210ENST00000640219 RGS9BPQ6ZS82 235 aa13.18□□□□□ -0.3
HLA-C-210ENST00000640219 PPP1R32Q7Z5V6 425 aa13.18□□□□□ -0.3
HLA-C-210ENST00000640219 CCDC91Q7Z6B0 441 aa13.18□□□□□ -0.3
HLA-C-210ENST00000640219 CEP97Q8IW35 865 aa13.18□□□□□ -0.3
HLA-C-210ENST00000640219 OR6P1Q8NGX9 317 aa13.18□□□□□ -0.3
HLA-C-210ENST00000640219 ULK4Q96C45 1275 aa13.18□□□□□ -0.3
HLA-C-210ENST00000640219 RAB3IPQ96QF0 476 aaPredicted RBP13.18□□□□□ -0.3
HLA-C-210ENST00000640219 TMUB1Q9BVT8 246 aa13.18□□□□□ -0.3
HLA-C-210ENST00000640219 MCCC2Q9HCC0 563 aa13.18□□□□□ -0.3
HLA-C-210ENST00000640219 TXLNGQ9NUQ3 528 aa13.18□□□□□ -0.3
HLA-C-210ENST00000640219 EURLQ9NYK6 297 aa13.18□□□□□ -0.3
HLA-C-210ENST00000640219 IGLV3-16A0A075B6K0 115 aa13.17□□□□□ -0.3
HLA-C-210ENST00000640219 MGAT4DA6NG13 374 aa13.17□□□□□ -0.3
HLA-C-210ENST00000640219 ERI2A8K979 691 aaKnown RBP13.17□□□□□ -0.3
HLA-C-210ENST00000640219 E7EQ34 232 aa13.17□□□□□ -0.3
HLA-C-210ENST00000640219 ZNF749O43361 778 aa13.17□□□□□ -0.3
HLA-C-210ENST00000640219 DCTN3O75935 186 aa13.17□□□□□ -0.3
HLA-C-210ENST00000640219 CD63P08962 238 aa13.17□□□□□ -0.3
HLA-C-210ENST00000640219 ATXN8OSP0DMR3 200 aa13.17□□□□□ -0.3
HLA-C-210ENST00000640219 SPTBP11277 2137 aa13.17□□□□□ -0.3
HLA-C-210ENST00000640219 MTHFD1P11586 935 aaKnown RBP13.17□□□□□ -0.3
HLA-C-210ENST00000640219 DRD2P14416 443 aa13.17□□□□□ -0.3
HLA-C-210ENST00000640219 CREB1P16220 341 aa13.17□□□□□ -0.3
HLA-C-210ENST00000640219 TAC1P20366 129 aa13.17□□□□□ -0.3
HLA-C-210ENST00000640219 CDH3P22223 829 aa13.17□□□□□ -0.3
HLA-C-210ENST00000640219 KIR3DL1P43629 444 aa13.17□□□□□ -0.3
HLA-C-210ENST00000640219 BBS9Q3SYG4 887 aa13.17□□□□□ -0.3
HLA-C-210ENST00000640219 ZNF658BQ4V348 819 aaPredicted RBP13.17□□□□□ -0.3
HLA-C-210ENST00000640219 LGSNQ5TDP6 509 aa13.17□□□□□ -0.3
HLA-C-210ENST00000640219 IRAK1BP1Q5VVH5 260 aa13.17□□□□□ -0.3
HLA-C-210ENST00000640219 METRNLQ641Q3 311 aa13.17□□□□□ -0.3
HLA-C-210ENST00000640219 RPUSD3Q6P087 351 aaKnown RBP13.17□□□□□ -0.3
HLA-C-210ENST00000640219 C3orf62Q6ZUJ4 267 aa13.17□□□□□ -0.3
HLA-C-210ENST00000640219 ANKMY2Q8IV38 441 aa13.17□□□□□ -0.3
HLA-C-210ENST00000640219 AGGF1Q8N302 714 aaeCLIP13.17□□□□□ -0.3
HLA-C-210ENST00000640219 NAT8LQ8N9F0 302 aa13.17□□□□□ -0.3
HLA-C-210ENST00000640219 PPHLN1Q8NEY8 458 aaKnown RBP13.17□□□□□ -0.3
HLA-C-210ENST00000640219 OR2Y1Q8NGV0 311 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms