RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 FAM110CQ1W6H9 321 aa18.01■□□□□ 0.47
SCARB2-213ENST00000638680 ZNF678Q5SXM1 525 aa18.01■□□□□ 0.47
SCARB2-213ENST00000638680 NUDT13Q86X67 352 aa18.01■□□□□ 0.47
SCARB2-213ENST00000638680 INO80EQ8NBZ0 244 aaPredicted RBP18.01■□□□□ 0.47
SCARB2-213ENST00000638680 SIGLEC10Q96LC7 697 aa18.01■□□□□ 0.47
SCARB2-213ENST00000638680 FBXL18Q96ME1 805 aa18.01■□□□□ 0.47
SCARB2-213ENST00000638680 BCO2Q9BYV7 579 aa18.01■□□□□ 0.47
SCARB2-213ENST00000638680 POLE4Q9NR33 117 aa18.01■□□□□ 0.47
SCARB2-213ENST00000638680 DUS2Q9NX74 493 aaKnown RBP18.01■□□□□ 0.47
SCARB2-213ENST00000638680 PPEF2O14830 753 aa18.01■□□□□ 0.47
SCARB2-213ENST00000638680 CLUP10909 449 aa18.01■□□□□ 0.47
SCARB2-213ENST00000638680 PGDP52209 483 aa18.01■□□□□ 0.47
SCARB2-213ENST00000638680 CREB5Q02930 508 aa18.01■□□□□ 0.47
SCARB2-213ENST00000638680 SP140Q13342 867 aa18.01■□□□□ 0.47
SCARB2-213ENST00000638680 MPP2Q14168 576 aa18.01■□□□□ 0.47
SCARB2-213ENST00000638680 PCBP2Q15366 365 aaKnown RBP eCLIP18.01■□□□□ 0.47
SCARB2-213ENST00000638680 SPANXN4Q5MJ08 99 aa18.01■□□□□ 0.47
SCARB2-213ENST00000638680 FBXL22Q6P050 247 aa18.01■□□□□ 0.47
SCARB2-213ENST00000638680 RELL1Q8IUW5 271 aa18.01■□□□□ 0.47
SCARB2-213ENST00000638680 PQLC3Q8N755 202 aa18.01■□□□□ 0.47
SCARB2-213ENST00000638680 ZNF676Q8N7Q3 588 aa18.01■□□□□ 0.47
SCARB2-213ENST00000638680 KCT2Q8NC54 265 aa18.01■□□□□ 0.47
SCARB2-213ENST00000638680 COQ8BQ96D53 544 aa18.01■□□□□ 0.47
SCARB2-213ENST00000638680 PEBP4Q96S96 227 aa18.01■□□□□ 0.47
SCARB2-213ENST00000638680 SLC29A3Q9BZD2 475 aa18.01■□□□□ 0.47
SCARB2-213ENST00000638680 DERL2Q9GZP9 239 aa18.01■□□□□ 0.47
SCARB2-213ENST00000638680 TRPV4Q9HBA0 871 aa18.01■□□□□ 0.47
SCARB2-213ENST00000638680 TM9SF3Q9HD45 589 aa18.01■□□□□ 0.47
SCARB2-213ENST00000638680 ADAP2Q9NPF8 381 aa18.01■□□□□ 0.47
SCARB2-213ENST00000638680 TBCCD1Q9NVR7 557 aa18.01■□□□□ 0.47
SCARB2-213ENST00000638680 MEMO1Q9Y316 297 aa18.01■□□□□ 0.47
SCARB2-213ENST00000638680 RFPL1O75677 317 aa18.01■□□□□ 0.47
SCARB2-213ENST00000638680 CDK6Q00534 326 aa18.01■□□□□ 0.47
SCARB2-213ENST00000638680 PAFAH1B3Q15102 231 aaKnown RBP18.01■□□□□ 0.47
SCARB2-213ENST00000638680 TMEM80Q96HE8 168 aa18.01■□□□□ 0.47
SCARB2-213ENST00000638680 SRMSQ9H3Y6 488 aa18.01■□□□□ 0.47
SCARB2-213ENST00000638680 CDH7Q9ULB5 785 aa18.01■□□□□ 0.47
SCARB2-213ENST00000638680 BTBD19C9JJ37 291 aa18■□□□□ 0.47
SCARB2-213ENST00000638680 MTX2O75431 263 aa18■□□□□ 0.47
SCARB2-213ENST00000638680 USP2O75604 605 aaPredicted RBP18■□□□□ 0.47
SCARB2-213ENST00000638680 SOX14O95416 240 aa18■□□□□ 0.47
SCARB2-213ENST00000638680 CHRNA6Q15825 494 aa18■□□□□ 0.47
SCARB2-213ENST00000638680 ATAT1Q5SQI0 421 aa18■□□□□ 0.47
SCARB2-213ENST00000638680 OR5T3Q8NGG3 340 aa18■□□□□ 0.47
SCARB2-213ENST00000638680 LRCH3Q96II8 777 aa18■□□□□ 0.47
SCARB2-213ENST00000638680 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18■□□□□ 0.47
SCARB2-213ENST00000638680 STOX2Q9P2F5 926 aaPredicted RBP18■□□□□ 0.47
SCARB2-213ENST00000638680 ERVW-1Q9UQF0 538 aa18■□□□□ 0.47
SCARB2-213ENST00000638680 A0A0G2JPF8 293 aa18■□□□□ 0.47
SCARB2-213ENST00000638680 HNRNPCL3B7ZW38 293 aa18■□□□□ 0.47
SCARB2-213ENST00000638680 TLX2O43763 284 aaPredicted RBP18■□□□□ 0.47
SCARB2-213ENST00000638680 OR1I1O60431 355 aa18■□□□□ 0.47
SCARB2-213ENST00000638680 CH25HO95992 272 aa18■□□□□ 0.47
SCARB2-213ENST00000638680 SRPRAP08240 638 aaKnown RBP18■□□□□ 0.47
SCARB2-213ENST00000638680 HNRNPCL4P0DMR1 293 aa18■□□□□ 0.47
SCARB2-213ENST00000638680 PGAM2P15259 253 aa18■□□□□ 0.47
SCARB2-213ENST00000638680 ACVRL1P37023 503 aa18■□□□□ 0.47
SCARB2-213ENST00000638680 CCR8P51685 355 aa18■□□□□ 0.47
SCARB2-213ENST00000638680 ARSFP54793 590 aa18■□□□□ 0.47
SCARB2-213ENST00000638680 FBXO15Q8NCQ5 510 aaPredicted RBP18■□□□□ 0.47
SCARB2-213ENST00000638680 KCTD13Q8WZ19 329 aa18■□□□□ 0.47
SCARB2-213ENST00000638680 ZNF806P0C7X5 589 aa18■□□□□ 0.47
SCARB2-213ENST00000638680 HOXD13P35453 343 aa18■□□□□ 0.47
SCARB2-213ENST00000638680 MAP3K8P41279 467 aa18■□□□□ 0.47
SCARB2-213ENST00000638680 AP1S2P56377 157 aa18■□□□□ 0.47
SCARB2-213ENST00000638680 MOGSQ13724 837 aa18■□□□□ 0.47
SCARB2-213ENST00000638680 SPATS1Q496A3 300 aa18■□□□□ 0.47
SCARB2-213ENST00000638680 CARD16Q5EG05 197 aa18■□□□□ 0.47
SCARB2-213ENST00000638680 SNX29P2Q8IUI4 249 aa18■□□□□ 0.47
SCARB2-213ENST00000638680 ZC3H10Q96K80 434 aaKnown RBP18■□□□□ 0.47
SCARB2-213ENST00000638680 MUS81Q96NY9 551 aa18■□□□□ 0.47
SCARB2-213ENST00000638680 HS3ST4Q9Y661 456 aa18■□□□□ 0.47
SCARB2-213ENST00000638680 RLN2P04090 185 aa18■□□□□ 0.47
SCARB2-213ENST00000638680 ELNP15502 786 aa18■□□□□ 0.47
SCARB2-213ENST00000638680 SAMD14Q8IZD0 417 aaPredicted RBP18■□□□□ 0.47
SCARB2-213ENST00000638680 SPAG16Q8N0X2 631 aa18■□□□□ 0.47
SCARB2-213ENST00000638680 ZNF384Q8TF68 577 aa18■□□□□ 0.47
SCARB2-213ENST00000638680 SLC35F5Q8WV83 523 aa18■□□□□ 0.47
SCARB2-213ENST00000638680 RNF11Q9Y3C5 154 aa18■□□□□ 0.47
SCARB2-213ENST00000638680 ATRNL1Q5VV63 1379 aa17.99■□□□□ 0.47
SCARB2-213ENST00000638680 FOSL2P15408 326 aa17.99■□□□□ 0.47
SCARB2-213ENST00000638680 IGFBP4P22692 258 aa17.99■□□□□ 0.47
SCARB2-213ENST00000638680 GPR68Q15743 365 aa17.99■□□□□ 0.47
SCARB2-213ENST00000638680 CILP2Q8IUL8 1156 aa17.99■□□□□ 0.47
SCARB2-213ENST00000638680 PLEKHO2Q8TD55 490 aa17.99■□□□□ 0.47
SCARB2-213ENST00000638680 ALPK1Q96QP1 1244 aa17.99■□□□□ 0.47
SCARB2-213ENST00000638680 TMED5Q9Y3A6 229 aa17.99■□□□□ 0.47
SCARB2-213ENST00000638680 CLCN7P51798 805 aa17.99■□□□□ 0.47
SCARB2-213ENST00000638680 FBXO22Q8NEZ5 403 aa17.99■□□□□ 0.47
SCARB2-213ENST00000638680 RGS17Q9UGC6 210 aaPredicted RBP17.99■□□□□ 0.47
SCARB2-213ENST00000638680 FAM170BA6NMN3 283 aa17.99■□□□□ 0.47
SCARB2-213ENST00000638680 SNAP29O95721 258 aa17.99■□□□□ 0.47
SCARB2-213ENST00000638680 TACSTD2P09758 323 aa17.99■□□□□ 0.47
SCARB2-213ENST00000638680 ATP4BP51164 291 aa17.99■□□□□ 0.47
SCARB2-213ENST00000638680 PLCZ1Q86YW0 608 aa17.99■□□□□ 0.47
SCARB2-213ENST00000638680 EVA1BQ9NVM1 165 aa17.99■□□□□ 0.47
SCARB2-213ENST00000638680 PCDHGB1Q9Y5G3 927 aa17.99■□□□□ 0.47
SCARB2-213ENST00000638680 ELOA3DA6NLF2 546 aaPredicted RBP17.99■□□□□ 0.47
SCARB2-213ENST00000638680 DUXAA6NLW8 204 aa17.99■□□□□ 0.47
SCARB2-213ENST00000638680 PIK3CBP42338 1070 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms