RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 EFHBQ8N7U6 833 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 LPCAT1Q8NF37 534 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 ZNF431Q8TF32 576 aaPredicted RBP11.67□□□□□ -0.54
CAPN3-221ENST00000638141 ANKRD49Q8WVL7 239 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 PMM1Q92871 262 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 COPS5Q92905 334 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 SERPINB11Q96P15 392 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 C1QTNF3Q9BXJ4 246 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 ASPNQ9BXN1 380 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 B3GNT5Q9BYG0 378 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 TFB2MQ9H5Q4 396 aaKnown RBP11.67□□□□□ -0.54
CAPN3-221ENST00000638141 FOLH1BQ9HBA9 442 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 EMC7Q9NPA0 242 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 ADARB2Q9NS39 739 aaKnown RBP11.67□□□□□ -0.54
CAPN3-221ENST00000638141 KRT84Q9NSB2 600 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 PCDHGA6Q9Y5G7 932 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 POLR2AP24928 1970 aaKnown RBP11.67□□□□□ -0.54
CAPN3-221ENST00000638141 SHROOM3Q8TF72 1996 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 IGKV6-21A0A0C4DH24 114 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 UBA6A0AVT1 1052 aaPredicted RBP11.67□□□□□ -0.54
CAPN3-221ENST00000638141 KRBOX1C9JBD0 128 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 WNT10BO00744 389 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 ABCD4O14678 606 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 IFNA14P01570 189 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 PROS1P07225 676 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 UROSP10746 265 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 AZGP1P25311 298 aaKnown RBP11.67□□□□□ -0.54
CAPN3-221ENST00000638141 ITGB7P26010 798 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 PTBP1P26599 531 aaKnown RBP eCLIP11.67□□□□□ -0.54
CAPN3-221ENST00000638141 TPI1P60174 286 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 RAB14P61106 215 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 PPP1R8Q12972 351 aaKnown RBP11.67□□□□□ -0.54
CAPN3-221ENST00000638141 CAMK1Q14012 370 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 VEPH1Q14D04 833 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 GRIK4Q16099 956 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 CARD16Q5EG05 197 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 OTUD1Q5VV17 481 aaPredicted RBP11.67□□□□□ -0.54
CAPN3-221ENST00000638141 ATG9BQ674R7 924 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 FAM131AQ6UXB0 335 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 CEP68Q76N32 757 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 ZDHHC21Q8IVQ6 265 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 FAM126BQ8IXS8 530 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 ZNF784Q8NCA9 323 aaPredicted RBP11.67□□□□□ -0.54
CAPN3-221ENST00000638141 RNF34Q969K3 372 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 MRGPRX2Q96LB1 330 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 NFKBIZQ9BYH8 718 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 NT5DC2Q9H857 520 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 RASSF1Q9NS23 344 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 RNF146Q9NTX7 359 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 CPNE7Q9UBL6 633 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 PCDHGB7Q9Y5F8 929 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 PMPCBO75439 489 aa11.66□□□□□ -0.54
CAPN3-221ENST00000638141 CRCPO75575 148 aa11.66□□□□□ -0.54
CAPN3-221ENST00000638141 OLFM2O95897 454 aa11.66□□□□□ -0.54
CAPN3-221ENST00000638141 ADRA1AP35348 466 aa11.66□□□□□ -0.54
CAPN3-221ENST00000638141 GGT2P36268 569 aa11.66□□□□□ -0.54
CAPN3-221ENST00000638141 RECQLP46063 649 aaPredicted RBP11.66□□□□□ -0.54
CAPN3-221ENST00000638141 DGKQP52824 942 aa11.66□□□□□ -0.54
CAPN3-221ENST00000638141 OAZ1P54368 228 aa11.66□□□□□ -0.54
CAPN3-221ENST00000638141 POU4F3Q15319 338 aa11.66□□□□□ -0.54
CAPN3-221ENST00000638141 FAM187BQ17R55 369 aa11.66□□□□□ -0.54
CAPN3-221ENST00000638141 MICAQ29983 383 aa11.66□□□□□ -0.54
CAPN3-221ENST00000638141 FAM219BQ5XKK7 198 aa11.66□□□□□ -0.54
CAPN3-221ENST00000638141 CALHM3Q86XJ0 350 aa11.66□□□□□ -0.54
CAPN3-221ENST00000638141 DEFB106AQ8N104 65 aa11.66□□□□□ -0.54
CAPN3-221ENST00000638141 C12orf29Q8N999 325 aa11.66□□□□□ -0.54
CAPN3-221ENST00000638141 RNF149Q8NC42 400 aa11.66□□□□□ -0.54
CAPN3-221ENST00000638141 OR5T2Q8NGG2 359 aa11.66□□□□□ -0.54
CAPN3-221ENST00000638141 KCNA7Q96RP8 456 aa11.66□□□□□ -0.54
CAPN3-221ENST00000638141 ENOPH1Q9UHY7 261 aa11.66□□□□□ -0.54
CAPN3-221ENST00000638141 EVLQ9UI08 416 aaPredicted RBP11.66□□□□□ -0.54
CAPN3-221ENST00000638141 RIMKLBQ9ULI2 386 aa11.66□□□□□ -0.54
CAPN3-221ENST00000638141 COPS3Q9UNS2 423 aa11.66□□□□□ -0.54
CAPN3-221ENST00000638141 hCG_1807616A0A1W2PRN6 198 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 GPX5O75715 221 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 MLYCDO95822 493 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 CSF2P04141 144 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 STAG3L1P0CL83 205 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 PRKAR1AP10644 381 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 CD1DP15813 335 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 ZNF37AP17032 561 aaPredicted RBP11.65□□□□□ -0.54
CAPN3-221ENST00000638141 GPC1P35052 558 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 RPS19P39019 145 aaKnown RBP11.65□□□□□ -0.54
CAPN3-221ENST00000638141 CCT3P49368 545 aaKnown RBP11.65□□□□□ -0.54
CAPN3-221ENST00000638141 SUOXP51687 545 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 CYP4F2P78329 520 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 DAB2P98082 770 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 SP4Q02446 784 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 EXOSC2Q13868 293 aaKnown RBP11.65□□□□□ -0.54
CAPN3-221ENST00000638141 SEMA3AQ14563 771 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 INO80DQ53TQ3 878 aaPredicted RBP11.65□□□□□ -0.54
CAPN3-221ENST00000638141 C6orf136Q5SQH8 315 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 FKBP1CQ5VVH2 108 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 EEF1DP3Q658K8 133 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 ZNF549Q6P9A3 640 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 HSDL2Q6YN16 418 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 RRM2BQ7LG56 351 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 ASPGQ86U10 573 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 CLEC4CQ8WTT0 213 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 WNT8BQ93098 351 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms