RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 HTR3CQ8WXA8 447 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 CACNG8Q8WXS5 425 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 PHYHIPQ92561 330 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 LPGAT1Q92604 370 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 SNRNP40Q96DI7 357 aaKnown RBP2.91□□□□□ -1.94
VIM-210ENST00000637053 ARSGQ96EG1 525 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 ELMOD3Q96FG2 381 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 BSCL2Q96G97 398 aaPredicted RBP2.91□□□□□ -1.94
VIM-210ENST00000637053 THOC3Q96J01 351 aaKnown RBP2.91□□□□□ -1.94
VIM-210ENST00000637053 TMX3Q96JJ7 454 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 PBKQ96KB5 322 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 CCDC42Q96M95 316 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 C5orf34Q96MH7 638 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 LRRC37BQ96QE4 947 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 CCNL2Q96S94 520 aaPredicted RBP2.91□□□□□ -1.94
VIM-210ENST00000637053 CD180Q99467 661 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 FAM110AQ9BQ89 295 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 TUBGCP2Q9BSJ2 902 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 UBAC1Q9BSL1 405 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 LRRC1Q9BTT6 524 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 CCDC28BQ9BUN5 200 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 JAM3Q9BX67 310 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 CALN1Q9BXU9 219 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 ANKRD60Q9BZ19 345 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 NUAK2Q9H093 628 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 ZMYND12Q9H0C1 365 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 ATG10Q9H0Y0 220 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 TMEM245Q9H330 911 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 TPK1Q9H3S4 243 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 SMOC2Q9H3U7 446 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 SAV1Q9H4B6 383 aaPredicted RBP2.91□□□□□ -1.94
VIM-210ENST00000637053 TMEM185BQ9H7F4 350 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 CATSPERBQ9H7T0 1116 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 GEMIN7Q9H840 131 aaKnown RBP2.91□□□□□ -1.94
VIM-210ENST00000637053 ACTR8Q9H981 624 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 CNOT10Q9H9A5 744 aaKnown RBP2.91□□□□□ -1.94
VIM-210ENST00000637053 SEC61A2Q9H9S3 476 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 ROPN1Q9HAT0 212 aaPredicted RBP2.91□□□□□ -1.94
VIM-210ENST00000637053 FOLH1BQ9HBA9 442 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 ZBTB26Q9HCK0 441 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 ZFP14Q9HCL3 533 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 KCNMB3Q9NPA1 279 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 CNGB3Q9NQW8 809 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 BATF3Q9NR55 127 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 ZCCHC3Q9NUD5 404 aaKnown RBP2.91□□□□□ -1.94
VIM-210ENST00000637053 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.91□□□□□ -1.94
VIM-210ENST00000637053 MRPL22Q9NWU5 206 aaKnown RBP2.91□□□□□ -1.94
VIM-210ENST00000637053 TMEM161AQ9NX61 479 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 MS4A12Q9NXJ0 267 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 GALNT8Q9NY28 637 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 SLCO1C1Q9NYB5 712 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 AHSPQ9NZD4 102 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 GRHL1Q9NZI5 618 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 HACD3Q9P035 362 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 WARS2Q9UGM6 360 aaKnown RBP2.91□□□□□ -1.94
VIM-210ENST00000637053 CIDEBQ9UHD4 219 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 CLEC2DQ9UHP7 191 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 LNPEPQ9UIQ6 1025 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 NAGKQ9UJ70 344 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 TBC1D24Q9ULP9 559 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 PLAGL1Q9UM63 463 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 RPH3ALQ9UNE2 315 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 OSGIN2Q9Y236 505 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 RCE1Q9Y256 329 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 ERGIC3Q9Y282 383 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 MRPS33Q9Y291 106 aaKnown RBP2.91□□□□□ -1.94
VIM-210ENST00000637053 INSL6Q9Y581 213 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 PCDHGB1Q9Y5G3 927 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 POLR3AO14802 1390 aaPredicted RBP2.9□□□□□ -1.94
VIM-210ENST00000637053 A0A1B0GUH1 482 aa2.9□□□□□ -1.95
VIM-210ENST00000637053 A0A1B0GVM2 712 aa2.9□□□□□ -1.95
VIM-210ENST00000637053 UBA6A0AVT1 1052 aaPredicted RBP2.9□□□□□ -1.95
VIM-210ENST00000637053 TMEM191CA6NGB0 347 aa2.9□□□□□ -1.95
VIM-210ENST00000637053 SNAP23O00161 211 aa2.9□□□□□ -1.95
VIM-210ENST00000637053 F2RL2O00254 374 aa2.9□□□□□ -1.95
VIM-210ENST00000637053 EIF3HO15372 352 aaKnown RBP eCLIP2.9□□□□□ -1.95
VIM-210ENST00000637053 PJA2O43164 708 aa2.9□□□□□ -1.95
VIM-210ENST00000637053 PLRG1O43660 514 aaKnown RBP2.9□□□□□ -1.95
VIM-210ENST00000637053 HS6ST1O60243 411 aa2.9□□□□□ -1.95
VIM-210ENST00000637053 PFKFB2O60825 505 aa2.9□□□□□ -1.95
VIM-210ENST00000637053 GLRA3O75311 464 aa2.9□□□□□ -1.95
VIM-210ENST00000637053 PSIP1O75475 530 aaKnown RBP2.9□□□□□ -1.95
VIM-210ENST00000637053 JRKO75564 520 aa2.9□□□□□ -1.95
VIM-210ENST00000637053 BCL10O95999 233 aa2.9□□□□□ -1.95
VIM-210ENST00000637053 LYNP07948 512 aa2.9□□□□□ -1.95
VIM-210ENST00000637053 PLEKP08567 350 aaPredicted RBP2.9□□□□□ -1.95
VIM-210ENST00000637053 ANXA5P08758 320 aa2.9□□□□□ -1.95
VIM-210ENST00000637053 GSTA2P09210 222 aa2.9□□□□□ -1.95
VIM-210ENST00000637053 TMEM191BP0C7N4 346 aa2.9□□□□□ -1.95
VIM-210ENST00000637053 COX5BP10606 129 aa2.9□□□□□ -1.95
VIM-210ENST00000637053 GNAT1P11488 350 aa2.9□□□□□ -1.95
VIM-210ENST00000637053 CCNB1P14635 433 aa2.9□□□□□ -1.95
VIM-210ENST00000637053 FOSL2P15408 326 aa2.9□□□□□ -1.95
VIM-210ENST00000637053 ZNF8P17098 575 aaPredicted RBP2.9□□□□□ -1.95
VIM-210ENST00000637053 GNAZP19086 355 aa2.9□□□□□ -1.95
VIM-210ENST00000637053 EIF2S2P20042 333 aaKnown RBP2.9□□□□□ -1.95
VIM-210ENST00000637053 CYP3A5P20815 502 aa2.9□□□□□ -1.95
VIM-210ENST00000637053 PRPS1L1P21108 318 aa2.9□□□□□ -1.95
VIM-210ENST00000637053 COMTP21964 271 aa2.9□□□□□ -1.95
VIM-210ENST00000637053 FBLP22087 321 aaKnown RBP2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms