RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 DNALI1O14645 258 aaPredicted RBP17.08■□□□□ 0.32
PNKP-225ENST00000636214 HAUS5O94927 633 aa17.08■□□□□ 0.32
PNKP-225ENST00000636214 GP1BBP13224 206 aa17.08■□□□□ 0.32
PNKP-225ENST00000636214 SKIV2L2P42285 1042 aaKnown RBP17.08■□□□□ 0.32
PNKP-225ENST00000636214 GLRBP48167 497 aa17.08■□□□□ 0.32
PNKP-225ENST00000636214 TAP2Q03519 686 aa17.08■□□□□ 0.32
PNKP-225ENST00000636214 CRYMQ14894 314 aa17.08■□□□□ 0.32
PNKP-225ENST00000636214 PRTGQ2VWP7 1150 aa17.08■□□□□ 0.32
PNKP-225ENST00000636214 PLEKHN1Q494U1 663 aaPredicted RBP17.08■□□□□ 0.32
PNKP-225ENST00000636214 RNASEH2BQ5TBB1 312 aaKnown RBP17.08■□□□□ 0.32
PNKP-225ENST00000636214 ZNF549Q6P9A3 640 aa17.08■□□□□ 0.32
PNKP-225ENST00000636214 KIRREL2Q6UWL6 708 aa17.08■□□□□ 0.32
PNKP-225ENST00000636214 PIWIL4Q7Z3Z4 852 aaKnown RBP17.08■□□□□ 0.32
PNKP-225ENST00000636214 MYO1HQ8N1T3 1032 aa17.08■□□□□ 0.32
PNKP-225ENST00000636214 DTWD1Q8N5C7 304 aa17.08■□□□□ 0.32
PNKP-225ENST00000636214 MMABQ96EY8 250 aaPredicted RBP17.08■□□□□ 0.32
PNKP-225ENST00000636214 CNDP1Q96KN2 507 aa17.08■□□□□ 0.32
PNKP-225ENST00000636214 C10orf90Q96M02 699 aa17.08■□□□□ 0.32
PNKP-225ENST00000636214 AARSD1Q9BTE6 412 aaKnown RBP17.08■□□□□ 0.32
PNKP-225ENST00000636214 TRMT1Q9NXH9 659 aaKnown RBP17.08■□□□□ 0.32
PNKP-225ENST00000636214 RUVBL1Q9Y265 456 aaKnown RBP17.08■□□□□ 0.32
PNKP-225ENST00000636214 HIVEP3Q5T1R4 2406 aa17.08■□□□□ 0.32
PNKP-225ENST00000636214 SVILO95425 2214 aa17.07■□□□□ 0.32
PNKP-225ENST00000636214 GFYI3L273 518 aa17.07■□□□□ 0.32
PNKP-225ENST00000636214 HPP00738 406 aa17.07■□□□□ 0.32
PNKP-225ENST00000636214 TCP1P17987 556 aaKnown RBP17.07■□□□□ 0.32
PNKP-225ENST00000636214 HRH2P25021 359 aa17.07■□□□□ 0.32
PNKP-225ENST00000636214 YBX1P67809 324 aaKnown RBP17.07■□□□□ 0.32
PNKP-225ENST00000636214 DSG2Q14126 1118 aa17.07■□□□□ 0.32
PNKP-225ENST00000636214 BBS9Q3SYG4 887 aa17.07■□□□□ 0.32
PNKP-225ENST00000636214 SPANXN3Q5MJ09 141 aa17.07■□□□□ 0.32
PNKP-225ENST00000636214 CISD2Q8N5K1 135 aaKnown RBP17.07■□□□□ 0.32
PNKP-225ENST00000636214 OR11G2Q8NGC1 345 aa17.07■□□□□ 0.32
PNKP-225ENST00000636214 PRR7Q8TB68 274 aa17.07■□□□□ 0.32
PNKP-225ENST00000636214 PPP4R1Q8TF05 950 aa17.07■□□□□ 0.32
PNKP-225ENST00000636214 ANP32BQ92688 251 aaKnown RBP17.07■□□□□ 0.32
PNKP-225ENST00000636214 SNRNP40Q96DI7 357 aaKnown RBP17.07■□□□□ 0.32
PNKP-225ENST00000636214 THOC3Q96J01 351 aaKnown RBP17.07■□□□□ 0.32
PNKP-225ENST00000636214 DRC3Q9H069 523 aa17.07■□□□□ 0.32
PNKP-225ENST00000636214 PCBD2Q9H0N5 130 aa17.07■□□□□ 0.32
PNKP-225ENST00000636214 DDX47Q9H0S4 455 aaKnown RBP17.07■□□□□ 0.32
PNKP-225ENST00000636214 GRPEL1Q9HAV7 217 aa17.07■□□□□ 0.32
PNKP-225ENST00000636214 PPANQ9NQ55 473 aaKnown RBP17.07■□□□□ 0.32
PNKP-225ENST00000636214 AGPAT4Q9NRZ5 378 aa17.07■□□□□ 0.32
PNKP-225ENST00000636214 STOX2Q9P2F5 926 aaPredicted RBP17.07■□□□□ 0.32
PNKP-225ENST00000636214 COPG1Q9Y678 874 aaKnown RBP17.07■□□□□ 0.32
PNKP-225ENST00000636214 NSG1A0A0A6YYJ2 146 aa17.06■□□□□ 0.32
PNKP-225ENST00000636214 TCP11X1B4DZS4 312 aa17.06■□□□□ 0.32
PNKP-225ENST00000636214 HAT1O14929 419 aa17.06■□□□□ 0.32
PNKP-225ENST00000636214 MED26O95402 600 aa17.06■□□□□ 0.32
PNKP-225ENST00000636214 C8GP07360 202 aa17.06■□□□□ 0.32
PNKP-225ENST00000636214 HEXBP07686 556 aa17.06■□□□□ 0.32
PNKP-225ENST00000636214 HIST1H2AGP0C0S8 130 aaPredicted RBP17.06■□□□□ 0.32
PNKP-225ENST00000636214 HIST1H2ADP20671 130 aa17.06■□□□□ 0.32
PNKP-225ENST00000636214 IMPA1P29218 277 aa17.06■□□□□ 0.32
PNKP-225ENST00000636214 AVPR1BP47901 424 aa17.06■□□□□ 0.32
PNKP-225ENST00000636214 EMP2P54851 167 aa17.06■□□□□ 0.32
PNKP-225ENST00000636214 RELAQ04206 551 aa17.06■□□□□ 0.32
PNKP-225ENST00000636214 SRSF1Q07955 248 aaKnown RBP eCLIP17.06■□□□□ 0.32
PNKP-225ENST00000636214 DHX9Q08211 1270 aaKnown RBP17.06■□□□□ 0.32
PNKP-225ENST00000636214 SP140Q13342 867 aa17.06■□□□□ 0.32
PNKP-225ENST00000636214 HKDC1Q2TB90 917 aa17.06■□□□□ 0.32
PNKP-225ENST00000636214 ZNF425Q6IV72 752 aa17.06■□□□□ 0.32
PNKP-225ENST00000636214 TMEM151BQ8IW70 566 aa17.06■□□□□ 0.32
PNKP-225ENST00000636214 C2CD4AQ8NCU7 369 aaPredicted RBP17.06■□□□□ 0.32
PNKP-225ENST00000636214 DNAJB14Q8TBM8 379 aa17.06■□□□□ 0.32
PNKP-225ENST00000636214 HIST1H2AHQ96KK5 128 aa17.06■□□□□ 0.32
PNKP-225ENST00000636214 CCDC138Q96M89 665 aa17.06■□□□□ 0.32
PNKP-225ENST00000636214 RUNDC3BQ96NL0 473 aa17.06■□□□□ 0.32
PNKP-225ENST00000636214 NDNQ99608 321 aa17.06■□□□□ 0.32
PNKP-225ENST00000636214 HIST1H2AJQ99878 128 aa17.06■□□□□ 0.32
PNKP-225ENST00000636214 H2AFJQ9BTM1 129 aa17.06■□□□□ 0.32
PNKP-225ENST00000636214 MKKSQ9NPJ1 570 aaPredicted RBP17.06■□□□□ 0.32
PNKP-225ENST00000636214 MED16Q9Y2X0 877 aa17.06■□□□□ 0.32
PNKP-225ENST00000636214 IGKV1-8A0A0C4DH67 115 aa17.05■□□□□ 0.32
PNKP-225ENST00000636214 H7BY64 318 aa17.05■□□□□ 0.32
PNKP-225ENST00000636214 PCDH17O14917 1159 aa17.05■□□□□ 0.32
PNKP-225ENST00000636214 GRK3P35626 688 aa17.05■□□□□ 0.32
PNKP-225ENST00000636214 RPS15AP62244 130 aaKnown RBP17.05■□□□□ 0.32
PNKP-225ENST00000636214 TBPL1P62380 186 aa17.05■□□□□ 0.32
PNKP-225ENST00000636214 AP2B1P63010 937 aa17.05■□□□□ 0.32
PNKP-225ENST00000636214 NR6A1Q15406 480 aa17.05■□□□□ 0.32
PNKP-225ENST00000636214 HIF1AQ16665 826 aa17.05■□□□□ 0.32
PNKP-225ENST00000636214 VWA2Q5GFL6 755 aa17.05■□□□□ 0.32
PNKP-225ENST00000636214 Q6ZS92 163 aa17.05■□□□□ 0.32
PNKP-225ENST00000636214 KIAA0408Q6ZU52 694 aa17.05■□□□□ 0.32
PNKP-225ENST00000636214 KBTBD2Q8IY47 623 aa17.05■□□□□ 0.32
PNKP-225ENST00000636214 PDIK1LQ8N165 341 aa17.05■□□□□ 0.32
PNKP-225ENST00000636214 AGGF1Q8N302 714 aaeCLIP17.05■□□□□ 0.32
PNKP-225ENST00000636214 SSC4DQ8WTU2 575 aa17.05■□□□□ 0.32
PNKP-225ENST00000636214 ALKBH8Q96BT7 664 aaKnown RBP17.05■□□□□ 0.32
PNKP-225ENST00000636214 C19orf60Q96EN9 201 aa17.05■□□□□ 0.32
PNKP-225ENST00000636214 PRAP1Q96NZ9 151 aa17.05■□□□□ 0.32
PNKP-225ENST00000636214 OR2A5Q96R48 311 aa17.05■□□□□ 0.32
PNKP-225ENST00000636214 PARVBQ9HBI1 364 aa17.05■□□□□ 0.32
PNKP-225ENST00000636214 ZNF160Q9HCG1 818 aa17.05■□□□□ 0.32
PNKP-225ENST00000636214 TMEM184CQ9NVA4 438 aa17.05■□□□□ 0.32
PNKP-225ENST00000636214 ASF1BQ9NVP2 202 aa17.05■□□□□ 0.32
PNKP-225ENST00000636214 CUEDC1Q9NWM3 386 aaPredicted RBP17.05■□□□□ 0.32
PNKP-225ENST00000636214 IGLV3-12A0A075B6K2 115 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms