RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 MCEMP1Q8IX19 187 aa1□□□□□ -2.25
SMARCB1-209ENST00000635578 CTAGE4Q8IX94 777 aa1□□□□□ -2.25
SMARCB1-209ENST00000635578 RAB42Q8N4Z0 105 aa1□□□□□ -2.25
SMARCB1-209ENST00000635578 L3MBTL4Q8NA19 623 aa1□□□□□ -2.25
SMARCB1-209ENST00000635578 AVL9Q8NBF6 648 aa1□□□□□ -2.25
SMARCB1-209ENST00000635578 KLHDC9Q8NEP7 349 aa1□□□□□ -2.25
SMARCB1-209ENST00000635578 GPRC5AQ8NFJ5 357 aa1□□□□□ -2.25
SMARCB1-209ENST00000635578 EXD1Q8NHP7 514 aa1□□□□□ -2.25
SMARCB1-209ENST00000635578 MRGPRDQ8TDS7 321 aa1□□□□□ -2.25
SMARCB1-209ENST00000635578 RNF128Q8TEB7 428 aa1□□□□□ -2.25
SMARCB1-209ENST00000635578 TRPC4APQ8TEL6 797 aa1□□□□□ -2.25
SMARCB1-209ENST00000635578 CCDC107Q8WV48 283 aa1□□□□□ -2.25
SMARCB1-209ENST00000635578 LPGAT1Q92604 370 aa1□□□□□ -2.25
SMARCB1-209ENST00000635578 SYN2Q92777 582 aaPredicted RBP1□□□□□ -2.25
SMARCB1-209ENST00000635578 LGALS12Q96DT0 336 aa1□□□□□ -2.25
SMARCB1-209ENST00000635578 CCDC34Q96HJ3 373 aa1□□□□□ -2.25
SMARCB1-209ENST00000635578 LRR1Q96L50 414 aa1□□□□□ -2.25
SMARCB1-209ENST00000635578 GCNAQ96QF7 691 aa1□□□□□ -2.25
SMARCB1-209ENST00000635578 IWS1Q96ST2 819 aa1□□□□□ -2.25
SMARCB1-209ENST00000635578 SEPHS2Q99611 448 aa1□□□□□ -2.25
SMARCB1-209ENST00000635578 GFI1Q99684 422 aa1□□□□□ -2.25
SMARCB1-209ENST00000635578 SYT15Q9BQS2 421 aa1□□□□□ -2.25
SMARCB1-209ENST00000635578 LMF2Q9BU23 707 aaKnown RBP1□□□□□ -2.25
SMARCB1-209ENST00000635578 ABHD6Q9BV23 337 aa1□□□□□ -2.25
SMARCB1-209ENST00000635578 CCDC106Q9BWC9 280 aa1□□□□□ -2.25
SMARCB1-209ENST00000635578 CDK19Q9BWU1 502 aa1□□□□□ -2.25
SMARCB1-209ENST00000635578 APOL6Q9BWW8 343 aa1□□□□□ -2.25
SMARCB1-209ENST00000635578 TEX12Q9BXU0 123 aa1□□□□□ -2.25
SMARCB1-209ENST00000635578 PANK2Q9BZ23 570 aa1□□□□□ -2.25
SMARCB1-209ENST00000635578 PRRG4Q9BZD6 226 aa1□□□□□ -2.25
SMARCB1-209ENST00000635578 UBA5Q9GZZ9 404 aa1□□□□□ -2.25
SMARCB1-209ENST00000635578 SPATC1LQ9H0A9 340 aa1□□□□□ -2.25
SMARCB1-209ENST00000635578 FAM49AQ9H0Q0 323 aaPredicted RBP1□□□□□ -2.25
SMARCB1-209ENST00000635578 P2RY12Q9H244 342 aa1□□□□□ -2.25
SMARCB1-209ENST00000635578 DPAGT1Q9H3H5 408 aa1□□□□□ -2.25
SMARCB1-209ENST00000635578 PDE7BQ9NP56 450 aa1□□□□□ -2.25
SMARCB1-209ENST00000635578 ACKR4Q9NPB9 350 aa1□□□□□ -2.25
SMARCB1-209ENST00000635578 A4GALTQ9NPC4 353 aa1□□□□□ -2.25
SMARCB1-209ENST00000635578 SIX2Q9NPC8 291 aa1□□□□□ -2.25
SMARCB1-209ENST00000635578 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP1□□□□□ -2.25
SMARCB1-209ENST00000635578 TBC1D22BQ9NU19 505 aa1□□□□□ -2.25
SMARCB1-209ENST00000635578 TRMT1Q9NXH9 659 aaKnown RBP1□□□□□ -2.25
SMARCB1-209ENST00000635578 PSD3Q9NYI0 1048 aa1□□□□□ -2.25
SMARCB1-209ENST00000635578 ZNF624Q9P2J8 865 aaPredicted RBP1□□□□□ -2.25
SMARCB1-209ENST00000635578 RHCGQ9UBD6 479 aa1□□□□□ -2.25
SMARCB1-209ENST00000635578 ZNF69Q9UC07 566 aa1□□□□□ -2.25
SMARCB1-209ENST00000635578 GAGE2DQ9UEU5 116 aa1□□□□□ -2.25
SMARCB1-209ENST00000635578 SEC63Q9UGP8 760 aaKnown RBP1□□□□□ -2.25
SMARCB1-209ENST00000635578 SLC24A2Q9UI40 661 aa1□□□□□ -2.25
SMARCB1-209ENST00000635578 CPSF3Q9UKF6 684 aaKnown RBP1□□□□□ -2.25
SMARCB1-209ENST00000635578 EXO1Q9UQ84 846 aaKnown RBP1□□□□□ -2.25
SMARCB1-209ENST00000635578 ZNF148Q9UQR1 794 aa1□□□□□ -2.25
SMARCB1-209ENST00000635578 GRIP1Q9Y3R0 1128 aa1□□□□□ -2.25
SMARCB1-209ENST00000635578 RNF215Q9Y6U7 377 aa1□□□□□ -2.25
SMARCB1-209ENST00000635578 COL5A1P20908 1838 aaPredicted RBP1□□□□□ -2.25
SMARCB1-209ENST00000635578 BRWD1Q9NSI6 2320 aa1□□□□□ -2.25
SMARCB1-209ENST00000635578 CITO14578 2027 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 VWA8A3KMH1 1905 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 ANKRD36A6QL64 1941 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 TONSLQ96HA7 1378 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 CEP350Q5VT06 3117 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 SPAG17Q6Q759 2223 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 ASTN2O75129 1339 aaPredicted RBP0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 BAZ2BQ9UIF8 2168 aaKnown RBP0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 COL4A2P08572 1712 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 UTRNP46939 3433 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 LOC100509620A0A075B734 347 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 GIMAP1-GIMAP5A0A087WTJ2 511 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 A0A0J9YWU9 116 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 LNP1A1A4G5 178 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 ANKUB1A6NFN9 424 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 HMGB1P1B2RPK0 211 aaPredicted RBP0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 GAPDHSO14556 408 aaPredicted RBP0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 AHCYL1O43865 530 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 MAGEC1O60732 1142 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 PRKRAO75569 313 aaKnown RBP0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 WISP2O76076 250 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 SORBS2O94875 1100 aaKnown RBP0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 PIGNO95427 931 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 EML2O95834 649 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 TRUB2O95900 331 aaKnown RBP0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 CLPTM1O96005 669 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 TSHBP01222 138 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 IGLV1-44P01699 117 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 TPOP07202 933 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 MMP10P09238 476 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 SMIM18P0DKX4 95 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 HSPA8P11142 646 aaKnown RBP0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 CEACAM1P13688 526 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 SELLP14151 372 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 DARSP14868 501 aaKnown RBP0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 LIFP15018 202 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 DPEP1P16444 411 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 PRLRP16471 622 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 CDH3P22223 829 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 AZGP1P25311 298 aaKnown RBP0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 ITGA3P26006 1051 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 TM4SF1P30408 202 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 HOXC8P31273 242 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 ACSL1P33121 698 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms