RNA–Protein interactions for RNA: ENST00000630907.2

UBE3A-222, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-222	ENST00000630907	NXPE4	Q6UWF7	544 aa		24.95	■■□□□ 1.58
UBE3A-222	ENST00000630907	CEACAM20	Q6UY09	585 aa		24.95	■■□□□ 1.58
UBE3A-222	ENST00000630907	ZYG11A	Q6WRX3	759 aa		24.95	■■□□□ 1.58
UBE3A-222	ENST00000630907	RNF44	Q7L0R7	432 aa		24.95	■■□□□ 1.58
UBE3A-222	ENST00000630907	TMPRSS11B	Q86T26	416 aa		24.95	■■□□□ 1.58
UBE3A-222	ENST00000630907	PPP1R3B	Q86XI6	285 aa		24.95	■■□□□ 1.58
UBE3A-222	ENST00000630907	SLC22A9	Q8IVM8	553 aa		24.95	■■□□□ 1.58
UBE3A-222	ENST00000630907	TEX9	Q8N6V9	391 aa		24.95	■■□□□ 1.58
UBE3A-222	ENST00000630907	OR8K5	Q8NH50	307 aa		24.95	■■□□□ 1.58
UBE3A-222	ENST00000630907	RDH11	Q8TC12	318 aa		24.95	■■□□□ 1.58
UBE3A-222	ENST00000630907	DDA1	Q9BW61	102 aa		24.95	■■□□□ 1.58
UBE3A-222	ENST00000630907	ASPSCR1	Q9BZE9	553 aa		24.95	■■□□□ 1.58
UBE3A-222	ENST00000630907	PELI2	Q9HAT8	420 aa		24.95	■■□□□ 1.58
UBE3A-222	ENST00000630907	SSU72	Q9NP77	194 aa	Known RBP	24.95	■■□□□ 1.58
UBE3A-222	ENST00000630907	MID2	Q9UJV3	735 aa		24.95	■■□□□ 1.58
UBE3A-222	ENST00000630907	PILRA	Q9UKJ1	303 aa		24.95	■■□□□ 1.58
UBE3A-222	ENST00000630907	ANGPTL3	Q9Y5C1	460 aa		24.95	■■□□□ 1.58
UBE3A-222	ENST00000630907	PCDHGA3	Q9Y5H0	932 aa		24.95	■■□□□ 1.58
UBE3A-222	ENST00000630907	NCOR2	Q9Y618	2525 aa		24.95	■■□□□ 1.58
UBE3A-222	ENST00000630907		A0A0J9YVX5	310 aa		24.94	■■□□□ 1.58
UBE3A-222	ENST00000630907		E7EQ34	232 aa		24.94	■■□□□ 1.58
UBE3A-222	ENST00000630907		G3V2L1	256 aa		24.94	■■□□□ 1.58
UBE3A-222	ENST00000630907	HAT1	O14929	419 aa		24.94	■■□□□ 1.58
UBE3A-222	ENST00000630907	TYROBP	O43914	113 aa		24.94	■■□□□ 1.58
UBE3A-222	ENST00000630907	DXO	O77932	396 aa	Known RBP	24.94	■■□□□ 1.58
UBE3A-222	ENST00000630907	MYL2	P10916	166 aa		24.94	■■□□□ 1.58
UBE3A-222	ENST00000630907	EZR	P15311	586 aa	Known RBP	24.94	■■□□□ 1.58
UBE3A-222	ENST00000630907	EPB42	P16452	691 aa		24.94	■■□□□ 1.58
UBE3A-222	ENST00000630907	GRK3	P35626	688 aa		24.94	■■□□□ 1.58
UBE3A-222	ENST00000630907	OR4K1	Q8NGD4	311 aa		24.94	■■□□□ 1.58
UBE3A-222	ENST00000630907	TCP10L	Q8TDR4	215 aa		24.94	■■□□□ 1.58
UBE3A-222	ENST00000630907	PMEPA1	Q969W9	287 aa		24.94	■■□□□ 1.58
UBE3A-222	ENST00000630907	TEFM	Q96QE5	360 aa	Known RBP	24.94	■■□□□ 1.58
UBE3A-222	ENST00000630907	ZFYVE21	Q9BQ24	234 aa		24.94	■■□□□ 1.58
UBE3A-222	ENST00000630907	ZPBP	Q9BS86	351 aa		24.94	■■□□□ 1.58
UBE3A-222	ENST00000630907	B3GNT4	Q9C0J1	378 aa		24.94	■■□□□ 1.58
UBE3A-222	ENST00000630907	SERTAD3	Q9UJW9	196 aa		24.94	■■□□□ 1.58
UBE3A-222	ENST00000630907	B3GALT1	Q9Y5Z6	326 aa		24.94	■■□□□ 1.58
UBE3A-222	ENST00000630907	ADAMTS20	P59510	1910 aa		24.93	■■□□□ 1.58
UBE3A-222	ENST00000630907	C9orf172	C9J069	976 aa		24.93	■■□□□ 1.58
UBE3A-222	ENST00000630907	BRINP1	O60477	761 aa		24.93	■■□□□ 1.58
UBE3A-222	ENST00000630907	C1GALT1C1L	P0DN25	315 aa		24.93	■■□□□ 1.58
UBE3A-222	ENST00000630907	PIK3CG	P48736	1102 aa		24.93	■■□□□ 1.58
UBE3A-222	ENST00000630907	SLCO4C1	Q6ZQN7	724 aa		24.93	■■□□□ 1.58
UBE3A-222	ENST00000630907	PLD3	Q8IV08	490 aa		24.93	■■□□□ 1.58
UBE3A-222	ENST00000630907	ARMC2	Q8NEN0	867 aa		24.93	■■□□□ 1.58
UBE3A-222	ENST00000630907	OR1L3	Q8NH93	324 aa		24.93	■■□□□ 1.58
UBE3A-222	ENST00000630907	CCDC126	Q96EE4	140 aa		24.93	■■□□□ 1.58
UBE3A-222	ENST00000630907	FCRL4	Q96PJ5	515 aa		24.93	■■□□□ 1.58
UBE3A-222	ENST00000630907	FAM111A	Q96PZ2	611 aa		24.93	■■□□□ 1.58
UBE3A-222	ENST00000630907	ASCL3	Q9NQ33	180 aa		24.93	■■□□□ 1.58
UBE3A-222	ENST00000630907	SLC17A7	Q9P2U7	560 aa		24.93	■■□□□ 1.58
UBE3A-222	ENST00000630907	PCDHGA7	Q9Y5G6	932 aa		24.93	■■□□□ 1.58
UBE3A-222	ENST00000630907	E2F3	O00716	465 aa		24.92	■■□□□ 1.58
UBE3A-222	ENST00000630907	NVL	O15381	856 aa	Known RBP	24.92	■■□□□ 1.58
UBE3A-222	ENST00000630907	SRPX2	O60687	465 aa	Predicted RBP	24.92	■■□□□ 1.58
UBE3A-222	ENST00000630907	H2AFY	O75367	372 aa	Known RBP	24.92	■■□□□ 1.58
UBE3A-222	ENST00000630907	CPA3	P15088	417 aa		24.92	■■□□□ 1.58
UBE3A-222	ENST00000630907	EPOR	P19235	508 aa		24.92	■■□□□ 1.58
UBE3A-222	ENST00000630907	PRKAA2	P54646	552 aa		24.92	■■□□□ 1.58
UBE3A-222	ENST00000630907	ITGA1	P56199	1179 aa		24.92	■■□□□ 1.58
UBE3A-222	ENST00000630907	GTF2H2	Q13888	395 aa		24.92	■■□□□ 1.58
UBE3A-222	ENST00000630907	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	24.92	■■□□□ 1.58
UBE3A-222	ENST00000630907	AGBL2	Q5U5Z8	902 aa		24.92	■■□□□ 1.58
UBE3A-222	ENST00000630907	ATG9B	Q674R7	924 aa		24.92	■■□□□ 1.58
UBE3A-222	ENST00000630907	GTF2H2C	Q6P1K8	395 aa		24.92	■■□□□ 1.58
UBE3A-222	ENST00000630907	GOLGA7	Q7Z5G4	137 aa		24.92	■■□□□ 1.58
UBE3A-222	ENST00000630907	SELENOS	Q9BQE4	189 aa		24.92	■■□□□ 1.58
UBE3A-222	ENST00000630907	AIF1L	Q9BQI0	150 aa		24.92	■■□□□ 1.58
UBE3A-222	ENST00000630907	CDRT15L2	A8MXV6	281 aa		24.91	■■□□□ 1.58
UBE3A-222	ENST00000630907	KATNA1	O75449	491 aa		24.91	■■□□□ 1.58
UBE3A-222	ENST00000630907	RPS17	P08708	135 aa	Known RBP	24.91	■■□□□ 1.58
UBE3A-222	ENST00000630907	VARS	P26640	1264 aa	Known RBP	24.91	■■□□□ 1.58
UBE3A-222	ENST00000630907	RPS15A	P62244	130 aa	Known RBP	24.91	■■□□□ 1.58
UBE3A-222	ENST00000630907	HERVK_113	P63132	956 aa		24.91	■■□□□ 1.58
UBE3A-222	ENST00000630907	MEF2A	Q02078	507 aa	Predicted RBP	24.91	■■□□□ 1.58
UBE3A-222	ENST00000630907	CYP4F3	Q08477	520 aa		24.91	■■□□□ 1.58
UBE3A-222	ENST00000630907	XKR6	Q5GH73	641 aa		24.91	■■□□□ 1.58
UBE3A-222	ENST00000630907	FRMPD2B	Q6IN97	320 aa		24.91	■■□□□ 1.58
UBE3A-222	ENST00000630907	TBC1D19	Q8N5T2	526 aa		24.91	■■□□□ 1.58
UBE3A-222	ENST00000630907	TLCD1	Q96CP7	247 aa		24.91	■■□□□ 1.58
UBE3A-222	ENST00000630907	C1QTNF3	Q9BXJ4	246 aa		24.91	■■□□□ 1.58
UBE3A-222	ENST00000630907	ERVK-6	Q9BXR3	956 aa		24.91	■■□□□ 1.58
UBE3A-222	ENST00000630907	SPRTN	Q9H040	489 aa	Predicted RBP	24.91	■■□□□ 1.58
UBE3A-222	ENST00000630907	EHD1	Q9H4M9	534 aa		24.91	■■□□□ 1.58
UBE3A-222	ENST00000630907	THSD1	Q9NS62	852 aa		24.91	■■□□□ 1.58
UBE3A-222	ENST00000630907	IRAK4	Q9NWZ3	460 aa		24.91	■■□□□ 1.58
UBE3A-222	ENST00000630907	COPG2	Q9UBF2	871 aa		24.91	■■□□□ 1.58
UBE3A-222	ENST00000630907	PCTP	Q9UKL6	214 aa		24.91	■■□□□ 1.58
UBE3A-222	ENST00000630907	LOC105369274	A0A096LPK9	316 aa		24.9	■■□□□ 1.58
UBE3A-222	ENST00000630907	LOC102723532	A0A0G2JNH3	316 aa		24.9	■■□□□ 1.58
UBE3A-222	ENST00000630907	FEZF1	A0PJY2	475 aa		24.9	■■□□□ 1.58
UBE3A-222	ENST00000630907	SASH3	O75995	380 aa		24.9	■■□□□ 1.58
UBE3A-222	ENST00000630907	OR2B3	O76000	313 aa		24.9	■■□□□ 1.58
UBE3A-222	ENST00000630907	IMPDH1	P20839	514 aa		24.9	■■□□□ 1.58
UBE3A-222	ENST00000630907	CXCR2	P25025	360 aa		24.9	■■□□□ 1.58
UBE3A-222	ENST00000630907	SLC5A2	P31639	672 aa		24.9	■■□□□ 1.58
UBE3A-222	ENST00000630907	VSX2	P58304	361 aa	Predicted RBP	24.9	■■□□□ 1.58
UBE3A-222	ENST00000630907	REEP5	Q00765	189 aa		24.9	■■□□□ 1.58
UBE3A-222	ENST00000630907	IRF8	Q02556	426 aa		24.9	■■□□□ 1.58

Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms