RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 TUBA3CQ13748 450 aa19.06■□□□□ 0.64
TARDBP-228ENST00000629725 FASTKQ14296 549 aaKnown RBP19.06■□□□□ 0.64
TARDBP-228ENST00000629725 BTBD16Q32M84 506 aa19.06■□□□□ 0.64
TARDBP-228ENST00000629725 ACER2Q5QJU3 275 aa19.06■□□□□ 0.64
TARDBP-228ENST00000629725 TSTD2Q5T7W7 516 aa19.06■□□□□ 0.64
TARDBP-228ENST00000629725 GARNL3Q5VVW2 1013 aa19.06■□□□□ 0.64
TARDBP-228ENST00000629725 TUBA3EQ6PEY2 450 aa19.06■□□□□ 0.64
TARDBP-228ENST00000629725 ZNF534Q76KX8 674 aa19.06■□□□□ 0.64
TARDBP-228ENST00000629725 ZC3H7AQ8IWR0 971 aaKnown RBP19.06■□□□□ 0.64
TARDBP-228ENST00000629725 MAGEC3Q8TD91 643 aa19.06■□□□□ 0.64
TARDBP-228ENST00000629725 AGAP11Q8TF27 550 aa19.06■□□□□ 0.64
TARDBP-228ENST00000629725 FOPNLQ96NB1 174 aa19.06■□□□□ 0.64
TARDBP-228ENST00000629725 DRC3Q9H069 523 aa19.06■□□□□ 0.64
TARDBP-228ENST00000629725 ANAPC5Q9UJX4 755 aa19.06■□□□□ 0.64
TARDBP-228ENST00000629725 NPIPA1Q9UND3 350 aa19.06■□□□□ 0.64
TARDBP-228ENST00000629725 TFR2Q9UP52 801 aa19.06■□□□□ 0.64
TARDBP-228ENST00000629725 RUVBL2Q9Y230 463 aaKnown RBP19.06■□□□□ 0.64
TARDBP-228ENST00000629725 SPG11Q96JI7 2443 aa19.05■□□□□ 0.64
TARDBP-228ENST00000629725 A0A0A6YYC8 382 aaPredicted RBP19.05■□□□□ 0.64
TARDBP-228ENST00000629725 ASPDHA6ND91 283 aa19.05■□□□□ 0.64
TARDBP-228ENST00000629725 I3L1I5 382 aaPredicted RBP19.05■□□□□ 0.64
TARDBP-228ENST00000629725 PRMT5O14744 637 aaPredicted RBP19.05■□□□□ 0.64
TARDBP-228ENST00000629725 CBFA2T2O43439 604 aa19.05■□□□□ 0.64
TARDBP-228ENST00000629725 SEC24DO94855 1032 aaPredicted RBP19.05■□□□□ 0.64
TARDBP-228ENST00000629725 CETN2P41208 172 aa19.05■□□□□ 0.64
TARDBP-228ENST00000629725 PRAMEP78395 509 aa19.05■□□□□ 0.64
TARDBP-228ENST00000629725 AARS2Q5JTZ9 985 aaKnown RBP19.05■□□□□ 0.64
TARDBP-228ENST00000629725 FCRLBQ6BAA4 426 aa19.05■□□□□ 0.64
TARDBP-228ENST00000629725 PLAG1Q6DJT9 500 aa19.05■□□□□ 0.64
TARDBP-228ENST00000629725 PTRHD1Q6GMV3 140 aaKnown RBP19.05■□□□□ 0.64
TARDBP-228ENST00000629725 AADACL2Q6P093 401 aa19.05■□□□□ 0.64
TARDBP-228ENST00000629725 TAB3Q8N5C8 712 aaPredicted RBP19.05■□□□□ 0.64
TARDBP-228ENST00000629725 MDS2Q8NDY4 140 aa19.05■□□□□ 0.64
TARDBP-228ENST00000629725 PHF10Q8WUB8 498 aaKnown RBP19.05■□□□□ 0.64
TARDBP-228ENST00000629725 RERGQ96A58 199 aaPredicted RBP19.05■□□□□ 0.64
TARDBP-228ENST00000629725 ZNF778Q96MU6 729 aa19.05■□□□□ 0.64
TARDBP-228ENST00000629725 PANX3Q96QZ0 392 aa19.05■□□□□ 0.64
TARDBP-228ENST00000629725 PLCD4Q9BRC7 762 aa19.05■□□□□ 0.64
TARDBP-228ENST00000629725 HES7Q9BYE0 225 aa19.05■□□□□ 0.64
TARDBP-228ENST00000629725 SYNPO2LQ9H987 977 aa19.05■□□□□ 0.64
TARDBP-228ENST00000629725 MRPS30Q9NP92 439 aaKnown RBP19.05■□□□□ 0.64
TARDBP-228ENST00000629725 ANKRD10Q9NXR5 420 aa19.05■□□□□ 0.64
TARDBP-228ENST00000629725 SPATA7Q9P0W8 599 aa19.05■□□□□ 0.64
TARDBP-228ENST00000629725 RIMKLBQ9ULI2 386 aa19.05■□□□□ 0.64
TARDBP-228ENST00000629725 IGHV3-20A0A0C4DH32 117 aa19.04■□□□□ 0.64
TARDBP-228ENST00000629725 E9PLN8 166 aa19.04■□□□□ 0.64
TARDBP-228ENST00000629725 KPNA5O15131 536 aa19.04■□□□□ 0.64
TARDBP-228ENST00000629725 FOXS1O43638 330 aa19.04■□□□□ 0.64
TARDBP-228ENST00000629725 ASNA1O43681 348 aa19.04■□□□□ 0.64
TARDBP-228ENST00000629725 CD46P15529 392 aa19.04■□□□□ 0.64
TARDBP-228ENST00000629725 GDF10P55107 478 aa19.04■□□□□ 0.64
TARDBP-228ENST00000629725 RWDD2BP57060 319 aa19.04■□□□□ 0.64
TARDBP-228ENST00000629725 ACVR1Q04771 509 aa19.04■□□□□ 0.64
TARDBP-228ENST00000629725 OR1C1Q15619 314 aa19.04■□□□□ 0.64
TARDBP-228ENST00000629725 SPINK14Q6IE38 97 aa19.04■□□□□ 0.64
TARDBP-228ENST00000629725 H3F3CQ6NXT2 135 aa19.04■□□□□ 0.64
TARDBP-228ENST00000629725 OTOAQ7RTW8 1153 aa19.04■□□□□ 0.64
TARDBP-228ENST00000629725 CPEB2Q7Z5Q1 589 aaKnown RBP19.04■□□□□ 0.64
TARDBP-228ENST00000629725 LDB1Q86U70 411 aaPredicted RBP19.04■□□□□ 0.64
TARDBP-228ENST00000629725 VSTM4Q8IW00 320 aa19.04■□□□□ 0.64
TARDBP-228ENST00000629725 TMEM178AQ8NBL3 297 aa19.04■□□□□ 0.64
TARDBP-228ENST00000629725 SDCCAG3Q96C92 435 aa19.04■□□□□ 0.64
TARDBP-228ENST00000629725 SCMH1Q96GD3 660 aa19.04■□□□□ 0.64
TARDBP-228ENST00000629725 FRMD6Q96NE9 622 aa19.04■□□□□ 0.64
TARDBP-228ENST00000629725 TREX2Q9BQ50 279 aaPredicted RBP19.04■□□□□ 0.64
TARDBP-228ENST00000629725 VKORC1Q9BQB6 163 aa19.04■□□□□ 0.64
TARDBP-228ENST00000629725 UTP23Q9BRU9 249 aaKnown RBP19.04■□□□□ 0.64
TARDBP-228ENST00000629725 VN1R1Q9GZP7 353 aa19.04■□□□□ 0.64
TARDBP-228ENST00000629725 NADKO95544 446 aaPredicted RBP19.03■□□□□ 0.64
TARDBP-228ENST00000629725 TSPAN12O95859 305 aa19.03■□□□□ 0.64
TARDBP-228ENST00000629725 ADRA1DP25100 572 aa19.03■□□□□ 0.64
TARDBP-228ENST00000629725 CD96P40200 585 aa19.03■□□□□ 0.64
TARDBP-228ENST00000629725 MAT1AQ00266 395 aaKnown RBP19.03■□□□□ 0.64
TARDBP-228ENST00000629725 MEP1AQ16819 746 aa19.03■□□□□ 0.64
TARDBP-228ENST00000629725 MFSD4BQ5TF39 518 aa19.03■□□□□ 0.64
TARDBP-228ENST00000629725 C3P1Q6ZMU1 363 aa19.03■□□□□ 0.64
TARDBP-228ENST00000629725 DOLPP1Q86YN1 238 aa19.03■□□□□ 0.64
TARDBP-228ENST00000629725 CNGA4Q8IV77 575 aa19.03■□□□□ 0.64
TARDBP-228ENST00000629725 EID3Q8N140 333 aa19.03■□□□□ 0.64
TARDBP-228ENST00000629725 GHDCQ8N2G8 530 aa19.03■□□□□ 0.64
TARDBP-228ENST00000629725 ARHGEF39Q8N4T4 335 aa19.03■□□□□ 0.64
TARDBP-228ENST00000629725 FAM98AQ8NCA5 519 aaKnown RBP19.03■□□□□ 0.64
TARDBP-228ENST00000629725 OR2A5Q96R48 311 aa19.03■□□□□ 0.64
TARDBP-228ENST00000629725 CYTH2Q99418 400 aa19.03■□□□□ 0.64
TARDBP-228ENST00000629725 KCNK13Q9HB14 408 aa19.03■□□□□ 0.64
TARDBP-228ENST00000629725 UTP6Q9NYH9 597 aaKnown RBP19.03■□□□□ 0.64
TARDBP-228ENST00000629725 COQ3Q9NZJ6 369 aa19.03■□□□□ 0.64
TARDBP-228ENST00000629725 C19orf25Q9UFG5 118 aaPredicted RBP19.03■□□□□ 0.64
TARDBP-228ENST00000629725 GNPTGQ9UJJ9 305 aa19.03■□□□□ 0.64
TARDBP-228ENST00000629725 IGKV1-8A0A0C4DH67 115 aa19.02■□□□□ 0.64
TARDBP-228ENST00000629725 A0A0U1RQJ8 604 aa19.02■□□□□ 0.64
TARDBP-228ENST00000629725 GOLGA6L9A6NEM1 432 aa19.02■□□□□ 0.64
TARDBP-228ENST00000629725 TXNDC9O14530 226 aa19.02■□□□□ 0.64
TARDBP-228ENST00000629725 PRRG2O14669 202 aa19.02■□□□□ 0.64
TARDBP-228ENST00000629725 ZNHIT1O43257 154 aa19.02■□□□□ 0.64
TARDBP-228ENST00000629725 PTMAP06454 111 aaKnown RBP19.02■□□□□ 0.64
TARDBP-228ENST00000629725 PKMP14618 531 aaKnown RBP19.02■□□□□ 0.64
TARDBP-228ENST00000629725 TTPAP49638 278 aa19.02■□□□□ 0.64
TARDBP-228ENST00000629725 ST13P50502 369 aaKnown RBP19.02■□□□□ 0.64
TARDBP-228ENST00000629725 ART1P52961 327 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms