RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 ARTNQ5T4W7 220 aa4.71□□□□□ -1.65
LINC00550-201ENST00000629293 NAGSQ8N159 534 aa4.71□□□□□ -1.65
LINC00550-201ENST00000629293 CFAP61Q8NHU2 1237 aa4.71□□□□□ -1.65
LINC00550-201ENST00000629293 STARD8Q92502 1023 aa4.71□□□□□ -1.65
LINC00550-201ENST00000629293 VOPP1Q96AW1 172 aa4.71□□□□□ -1.65
LINC00550-201ENST00000629293 ZNF641Q96N77 438 aaPredicted RBP4.71□□□□□ -1.65
LINC00550-201ENST00000629293 TMEM120AQ9BXJ8 343 aa4.71□□□□□ -1.65
LINC00550-201ENST00000629293 RNPEPL1Q9HAU8 725 aa4.71□□□□□ -1.65
LINC00550-201ENST00000629293 NEU3Q9UQ49 428 aa4.71□□□□□ -1.65
LINC00550-201ENST00000629293 MTO1Q9Y2Z2 717 aaKnown RBP4.71□□□□□ -1.65
LINC00550-201ENST00000629293 IGHV1OR21-1A0A087WYE8 117 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 BIRC5O15392 142 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 PRAMEF11O60813 436 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 KRT38O76015 456 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 HAUS5O94927 633 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 ANP32DO95626 131 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 ACP5P13686 325 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 AMPD1P23109 780 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 CSF2RBP32927 897 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 RASSF2P50749 326 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 KIAA1024LP59773 190 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 B4GALNT1Q00973 533 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 RALGDSQ12967 914 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 NAB1Q13506 487 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 BMPR2Q13873 1038 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 PAFAH1B3Q15102 231 aaKnown RBP4.71□□□□□ -1.66
LINC00550-201ENST00000629293 ANKRD20A2Q5SQ80 823 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 ANKRD20A1Q5TYW2 823 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 ANKRD20A3Q5VUR7 823 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 ZNF449Q6P9G9 518 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 HSD11B1LQ7Z5J1 315 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 OR10G6Q8NH81 332 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 SLC37A2Q8TED4 501 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 TFB1MQ8WVM0 346 aaKnown RBP4.71□□□□□ -1.66
LINC00550-201ENST00000629293 AP2M1Q96CW1 435 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 ARL8BQ9NVJ2 186 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 HEY2Q9UBP5 337 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 TP53TG5Q9Y2B4 290 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 DNAJC16Q9Y2G8 782 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 LOC101059948A0A1B0GTJ6 334 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 CAPN14A8MX76 684 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 TOR1BO14657 336 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 POLR1CO15160 346 aaPredicted RBP4.71□□□□□ -1.66
LINC00550-201ENST00000629293 STK17BO94768 372 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 CEACAM5P06731 702 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 TPP2P29144 1249 aaPredicted RBP4.71□□□□□ -1.66
LINC00550-201ENST00000629293 KIR3DL1P43629 444 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 ARFIP2P53365 341 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 LIMK2P53671 638 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 CDK3Q00526 305 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 HHEXQ03014 270 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 BST1Q10588 318 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 WASHC5Q12768 1159 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 LGSNQ5TDP6 509 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 LRRC8BQ6P9F7 803 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 OGFOD3Q6PK18 319 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 NRROSQ86YC3 692 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 GALNT13Q8IUC8 556 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 CTAGE3PQ8IX95 158 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 NLGN4XQ8N0W4 816 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 UMODL1-AS1Q8N2C9 162 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 NPWQ8N729 165 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 FAM156AQ8NDB6 213 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 NLGN4YQ8NFZ3 816 aaPredicted RBP4.71□□□□□ -1.66
LINC00550-201ENST00000629293 PPP1R35Q8TAP8 253 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 ACMSDQ8TDX5 336 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 NSMCE1Q8WV22 266 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 APOBEC4Q8WW27 367 aaKnown RBP4.71□□□□□ -1.66
LINC00550-201ENST00000629293 NTAN1Q96AB6 310 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 TMEM159Q96B96 161 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 TBATAQ96M53 351 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 ZNF570Q96NI8 536 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 ANKRD27Q96NW4 1050 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 OR2M4Q96R27 311 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 GORASP1Q9BQQ3 440 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 TUBB6Q9BUF5 446 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 ULBP3Q9BZM4 244 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 NT5MQ9NPB1 228 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 FBXO6Q9NRD1 293 aaPredicted RBP4.71□□□□□ -1.66
LINC00550-201ENST00000629293 NKX1-2Q9UD57 310 aaPredicted RBP4.71□□□□□ -1.66
LINC00550-201ENST00000629293 EMCNQ9ULC0 261 aa4.71□□□□□ -1.66
LINC00550-201ENST00000629293 A0A0G2JND7 137 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 PIPSLA2A3N6 862 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 NPIPB15A6NHN6 443 aaPredicted RBP4.7□□□□□ -1.66
LINC00550-201ENST00000629293 DNAJB5O75953 348 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 EML2O95834 649 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 BPGMP07738 259 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 TPBGLP0DKB5 382 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 LHCGRP22888 699 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 CD82P27701 267 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 THBS2P35442 1172 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 TRIM23P36406 574 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 CASRP41180 1078 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 MAGEA12P43365 314 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 UQCRFS1P47985 274 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 CHAF1BQ13112 559 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 FRG1Q14331 258 aaKnown RBP4.7□□□□□ -1.66
LINC00550-201ENST00000629293 PLA2G4EQ3MJ16 856 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 CMPK2Q5EBM0 449 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 FDX2Q6P4F2 183 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms