RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 GET4Q7L5D6 327 aaPredicted RBP8.69□□□□□ -1.02
VCL-206ENST00000623461 ZNF598Q86UK7 904 aaKnown RBP8.69□□□□□ -1.02
VCL-206ENST00000623461 CARM1Q86X55 608 aa8.69□□□□□ -1.02
VCL-206ENST00000623461 CMTR2Q8IYT2 770 aaKnown RBP8.69□□□□□ -1.02
VCL-206ENST00000623461 ARMC10Q8N2F6 343 aa8.69□□□□□ -1.02
VCL-206ENST00000623461 DCBLD1Q8N8Z6 715 aa8.69□□□□□ -1.02
VCL-206ENST00000623461 DDX1Q92499 740 aaKnown RBP8.69□□□□□ -1.02
VCL-206ENST00000623461 S100A16Q96FQ6 103 aaKnown RBP8.69□□□□□ -1.02
VCL-206ENST00000623461 FBXL18Q96ME1 805 aa8.69□□□□□ -1.02
VCL-206ENST00000623461 CIPCQ9C0C6 399 aa8.69□□□□□ -1.02
VCL-206ENST00000623461 NRCAMQ92823 1304 aa8.69□□□□□ -1.02
VCL-206ENST00000623461 AGAP5A6NIR3 686 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 FFAR2O15552 330 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 C22orf31O95567 290 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 PIGRP01833 764 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 CD2P06729 351 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 SLC5A2P31639 672 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 DGKQP52824 942 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 TXNRD3NBQ6F5E7 133 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 CAND1Q86VP6 1230 aaKnown RBP8.68□□□□□ -1.02
VCL-206ENST00000623461 HDDC3Q8N4P3 179 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 BEX2Q9BXY8 128 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 FAM198AQ9UFP1 575 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 MRPL42Q9Y6G3 142 aaKnown RBP8.68□□□□□ -1.02
VCL-206ENST00000623461 IVDP26440 423 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 AFF1P51825 1210 aaKnown RBP8.68□□□□□ -1.02
VCL-206ENST00000623461 CEBPGP53567 150 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 GANABQ14697 944 aaKnown RBP8.68□□□□□ -1.02
VCL-206ENST00000623461 PAFAH1B3Q15102 231 aaKnown RBP8.68□□□□□ -1.02
VCL-206ENST00000623461 TATDN1Q6P1N9 297 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 GDPGP1Q6ZNW5 385 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 TSPAN33Q86UF1 283 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 RAVER1Q8IY67 606 aaKnown RBP8.68□□□□□ -1.02
VCL-206ENST00000623461 C2CD4AQ8NCU7 369 aaPredicted RBP8.68□□□□□ -1.02
VCL-206ENST00000623461 ALPK1Q96QP1 1244 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 TCEAL7Q9BRU2 100 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 MTG2Q9H4K7 406 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 TAS2R10Q9NYW0 307 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 WRBO00258 174 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 CFL1P23528 166 aaKnown RBP8.68□□□□□ -1.02
VCL-206ENST00000623461 CHMP24386 653 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 UQCRC1P31930 480 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 PRR5P85299 388 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 C10orf62Q5T681 223 aaPredicted RBP8.68□□□□□ -1.02
VCL-206ENST00000623461 UBAP2Q5T6F2 1119 aaKnown RBP8.68□□□□□ -1.02
VCL-206ENST00000623461 FAM171A1Q5VUB5 890 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 HSDL2Q6YN16 418 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 FATE1Q969F0 183 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 SLC35G5Q96KT7 338 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 MGLLQ99685 303 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 TM9SF2Q99805 663 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 WDR6Q9NNW5 1121 aaKnown RBP8.68□□□□□ -1.02
VCL-206ENST00000623461 SH3D21A4FU49 640 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 PAHP00439 452 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 PLATP00750 562 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 URODP06132 367 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 SSR2P43308 183 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 CRISP3P54108 245 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 DSTNP60981 165 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 RPP38P78345 283 aaKnown RBP8.68□□□□□ -1.02
VCL-206ENST00000623461 PIGFQ07326 219 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 PCSK9Q8NBP7 692 aaKnown RBP8.68□□□□□ -1.02
VCL-206ENST00000623461 PPP1R16AQ96I34 528 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 LRCH3Q96II8 777 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 DHRS1Q96LJ7 313 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 PGLYRP2Q96PD5 576 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 A0A1B0GVC2 190 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 SELPLGQ14242 412 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 STEAP4Q687X5 459 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 CES5AQ6NT32 575 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 PAPD5Q8NDF8 572 aaKnown RBP8.68□□□□□ -1.02
VCL-206ENST00000623461 FCAMRQ8WWV6 532 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 MIR1-1HGQ9H1L0 117 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 EXO5Q9H790 373 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 TMEM45AQ9NWC5 275 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 PCDHGA4Q9Y5G9 962 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 TGM6O95932 706 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 TFAP2AP05549 437 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 LEPRP48357 1165 aaKnown RBP8.68□□□□□ -1.02
VCL-206ENST00000623461 GRK1Q15835 563 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 UGT8Q16880 541 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 CDHR3Q6ZTQ4 885 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 LRRC70Q7Z2Q7 622 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 PLD6Q8N2A8 252 aaKnown RBP8.68□□□□□ -1.02
VCL-206ENST00000623461 KIAA1191Q96A73 305 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 HBEGFQ99075 208 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 TTLL2Q9BWV7 592 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 ELL3Q9HB65 397 aaPredicted RBP8.68□□□□□ -1.02
VCL-206ENST00000623461 MOCS1Q9NZB8 636 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 CLCA3PQ9Y6N3 262 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 CDH10Q9Y6N8 788 aa8.68□□□□□ -1.02
VCL-206ENST00000623461 A0A1W2PRQ8 180 aa8.67□□□□□ -1.02
VCL-206ENST00000623461 TBL1XO60907 577 aa8.67□□□□□ -1.02
VCL-206ENST00000623461 SIX3O95343 332 aaPredicted RBP8.67□□□□□ -1.02
VCL-206ENST00000623461 ACVR2AP27037 513 aa8.67□□□□□ -1.02
VCL-206ENST00000623461 NCS1P62166 190 aa8.67□□□□□ -1.02
VCL-206ENST00000623461 ZNF630Q2M218 657 aaPredicted RBP8.67□□□□□ -1.02
VCL-206ENST00000623461 FBXO48Q5FWF7 155 aa8.67□□□□□ -1.02
VCL-206ENST00000623461 ATCAYQ86WG3 371 aa8.67□□□□□ -1.02
VCL-206ENST00000623461 ZBED6CLQ96FA7 236 aaPredicted RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms