RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 LRP4O75096 1905 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 CACNA1IQ9P0X4 2223 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 ABCA7Q8IZY2 2146 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 TRBV23OR9-2A0A075B6M9 112 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 PIPSLA2A3N6 862 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 TMEM221A6NGB7 291 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 M0R296 226 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 FOXE1O00358 373 aaPredicted RBP6.74□□□□□ -1.33
CBWD3-219ENST00000622817 VILLO15195 856 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 BCAT2O15382 392 aaPredicted RBP6.74□□□□□ -1.33
CBWD3-219ENST00000622817 SLC22A3O75751 556 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 CCNDBP1O95273 360 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 VIPP01282 170 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 SNRPB2P08579 225 aaKnown RBP6.74□□□□□ -1.33
CBWD3-219ENST00000622817 PCNAP12004 261 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 TDGF1P13385 188 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 NQO1P15559 274 aaKnown RBP6.74□□□□□ -1.33
CBWD3-219ENST00000622817 HRH2P25021 359 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 MAPK1P28482 360 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 SERPINB1P30740 379 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 AFF3P51826 1226 aaKnown RBP6.74□□□□□ -1.33
CBWD3-219ENST00000622817 DIO3P55073 304 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 C21orf59P57076 290 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 RPL38P63173 70 aaKnown RBP6.74□□□□□ -1.33
CBWD3-219ENST00000622817 PHEXP78562 749 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 ABATP80404 500 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 CSTF1Q05048 431 aaKnown RBP6.74□□□□□ -1.33
CBWD3-219ENST00000622817 PRDX1Q06830 199 aaKnown RBP6.74□□□□□ -1.33
CBWD3-219ENST00000622817 LAPTM4AQ15012 233 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 TEAD4Q15561 434 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 DNAL1Q4LDG9 190 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 PRRT3Q5FWE3 981 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 CACHD1Q5VU97 1274 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 IL23RQ5VWK5 629 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 ICE2Q659A1 982 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 PAOXQ6QHF9 649 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 TSSK4Q6SA08 328 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 RINLQ6ZS11 566 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 AMIGO1Q86WK6 493 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 FAM129CQ86XR2 697 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 C1orf210Q8IVY1 113 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 FAM9CQ8IZT9 166 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 SDR16C5Q8N3Y7 309 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 KIF2BQ8N4N8 673 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 AVL9Q8NBF6 648 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 RBM15BQ8NDT2 890 aaKnown RBP6.74□□□□□ -1.33
CBWD3-219ENST00000622817 HUS1BQ8NHY5 278 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 TSPEARQ8WU66 669 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 METTL2AQ96IZ6 378 aaKnown RBP6.74□□□□□ -1.33
CBWD3-219ENST00000622817 MTERF1Q99551 399 aaKnown RBP6.74□□□□□ -1.33
CBWD3-219ENST00000622817 AIF1LQ9BQI0 150 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 SLC25A23Q9BV35 468 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 LRRC61Q9BV99 259 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 ACAT2Q9BWD1 397 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 TBC1D10AQ9BXI6 508 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 SRMSQ9H3Y6 488 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 PRM3Q9NNZ6 103 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 SLC40A1Q9NP59 571 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 POT1Q9NUX5 634 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 ZIM2Q9NZV7 527 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 CCDC167Q9P0B6 97 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 SPASTQ9UBP0 616 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 VPS29Q9UBQ0 182 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 ADGRE2Q9UHX3 823 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 KNL1Q8NG31 2342 aa6.74□□□□□ -1.33
CBWD3-219ENST00000622817 TECTAO75443 2155 aa6.73□□□□□ -1.33
CBWD3-219ENST00000622817 PRAMEF33A0A0G2JMD5 474 aa6.73□□□□□ -1.33
CBWD3-219ENST00000622817 H0YHG0 523 aa6.73□□□□□ -1.33
CBWD3-219ENST00000622817 CELA2BP08218 269 aaPredicted RBP6.73□□□□□ -1.33
CBWD3-219ENST00000622817 KRT16P08779 473 aa6.73□□□□□ -1.33
CBWD3-219ENST00000622817 PRPS2P11908 318 aa6.73□□□□□ -1.33
CBWD3-219ENST00000622817 ACPPP15309 386 aa6.73□□□□□ -1.33
CBWD3-219ENST00000622817 PIK3CBP42338 1070 aa6.73□□□□□ -1.33
CBWD3-219ENST00000622817 GCGRP47871 477 aa6.73□□□□□ -1.33
CBWD3-219ENST00000622817 CSNK1EP49674 416 aaKnown RBP6.73□□□□□ -1.33
CBWD3-219ENST00000622817 NME5P56597 212 aa6.73□□□□□ -1.33
CBWD3-219ENST00000622817 HNRNPKP61978 463 aaKnown RBP eCLIP6.73□□□□□ -1.33
CBWD3-219ENST00000622817 KCNJ2P63252 427 aa6.73□□□□□ -1.33
CBWD3-219ENST00000622817 UBE2IP63279 158 aaKnown RBP6.73□□□□□ -1.33
CBWD3-219ENST00000622817 C1orf61Q13536 156 aa6.73□□□□□ -1.33
CBWD3-219ENST00000622817 CUL3Q13618 768 aa6.73□□□□□ -1.33
CBWD3-219ENST00000622817 DDX39BQ13838 428 aaKnown RBP6.73□□□□□ -1.33
CBWD3-219ENST00000622817 PLCL1Q15111 1095 aa6.73□□□□□ -1.33
CBWD3-219ENST00000622817 RFTN2Q52LD8 501 aaPredicted RBP6.73□□□□□ -1.33
CBWD3-219ENST00000622817 LYSMD4Q5XG99 296 aa6.73□□□□□ -1.33
CBWD3-219ENST00000622817 CYP20A1Q6UW02 462 aa6.73□□□□□ -1.33
CBWD3-219ENST00000622817 LAYNQ6UX15 382 aa6.73□□□□□ -1.33
CBWD3-219ENST00000622817 TMIGD1Q6UXZ0 262 aa6.73□□□□□ -1.33
CBWD3-219ENST00000622817 GK5Q6ZS86 529 aa6.73□□□□□ -1.33
CBWD3-219ENST00000622817 ARMCX6Q7L4S7 300 aa6.73□□□□□ -1.33
CBWD3-219ENST00000622817 SLC9B2Q86UD5 537 aa6.73□□□□□ -1.33
CBWD3-219ENST00000622817 GKN2Q86XP6 184 aa6.73□□□□□ -1.33
CBWD3-219ENST00000622817 RBM12BQ8IXT5 1001 aaKnown RBP6.73□□□□□ -1.33
CBWD3-219ENST00000622817 ARHGAP24Q8N264 748 aa6.73□□□□□ -1.33
CBWD3-219ENST00000622817 KYQ8NBH2 561 aa6.73□□□□□ -1.33
CBWD3-219ENST00000622817 FAM46DQ8NEK8 389 aa6.73□□□□□ -1.33
CBWD3-219ENST00000622817 OR4E2Q8NGC2 313 aa6.73□□□□□ -1.33
CBWD3-219ENST00000622817 OR4K1Q8NGD4 311 aa6.73□□□□□ -1.33
CBWD3-219ENST00000622817 GAB3Q8WWW8 586 aa6.73□□□□□ -1.33
CBWD3-219ENST00000622817 MCUR1Q96AQ8 359 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms