RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 MADCAM1Q13477 382 aa12.66□□□□□ -0.38
CHD1L-210ENST00000622533 ABRAXAS2Q15018 415 aa12.66□□□□□ -0.38
CHD1L-210ENST00000622533 RFTN2Q52LD8 501 aaPredicted RBP12.66□□□□□ -0.38
CHD1L-210ENST00000622533 RUNDC3AQ59EK9 446 aa12.66□□□□□ -0.38
CHD1L-210ENST00000622533 GNASQ5JWF2 1037 aa12.66□□□□□ -0.38
CHD1L-210ENST00000622533 NADSYN1Q6IA69 706 aa12.66□□□□□ -0.38
CHD1L-210ENST00000622533 SHQ1Q6PI26 577 aaKnown RBP12.66□□□□□ -0.38
CHD1L-210ENST00000622533 SYCE2Q6PIF2 218 aa12.66□□□□□ -0.38
CHD1L-210ENST00000622533 CERS6Q6ZMG9 384 aa12.66□□□□□ -0.38
CHD1L-210ENST00000622533 TRIM48Q8IWZ4 208 aa12.66□□□□□ -0.38
CHD1L-210ENST00000622533 MSRB3Q8IXL7 192 aa12.66□□□□□ -0.38
CHD1L-210ENST00000622533 FAM9CQ8IZT9 166 aa12.66□□□□□ -0.38
CHD1L-210ENST00000622533 FAM109AQ8N4B1 249 aa12.66□□□□□ -0.38
CHD1L-210ENST00000622533 LPCAT1Q8NF37 534 aa12.66□□□□□ -0.38
CHD1L-210ENST00000622533 TBC1D20Q96BZ9 403 aa12.66□□□□□ -0.38
CHD1L-210ENST00000622533 IPPKQ9H8X2 491 aa12.66□□□□□ -0.38
CHD1L-210ENST00000622533 PDP1Q9P0J1 537 aaPredicted RBP12.66□□□□□ -0.38
CHD1L-210ENST00000622533 RABL2BQ9UNT1 228 aa12.66□□□□□ -0.38
CHD1L-210ENST00000622533 ERVW-1Q9UQF0 538 aa12.66□□□□□ -0.38
CHD1L-210ENST00000622533 OR6C70A6NIJ9 312 aa12.65□□□□□ -0.38
CHD1L-210ENST00000622533 SYN3O14994 580 aa12.65□□□□□ -0.38
CHD1L-210ENST00000622533 RGS5O15539 181 aa12.65□□□□□ -0.38
CHD1L-210ENST00000622533 OR1I1O60431 355 aa12.65□□□□□ -0.38
CHD1L-210ENST00000622533 ERN1O75460 977 aaKnown RBP12.65□□□□□ -0.38
CHD1L-210ENST00000622533 ARHGEF15O94989 841 aa12.65□□□□□ -0.38
CHD1L-210ENST00000622533 GLUD1P00367 558 aa12.65□□□□□ -0.38
CHD1L-210ENST00000622533 THPOP40225 353 aa12.65□□□□□ -0.38
CHD1L-210ENST00000622533 RGS4P49798 205 aa12.65□□□□□ -0.38
CHD1L-210ENST00000622533 CDKN1CP49918 316 aaPredicted RBP12.65□□□□□ -0.38
CHD1L-210ENST00000622533 RPL38P63173 70 aaKnown RBP12.65□□□□□ -0.38
CHD1L-210ENST00000622533 KEAP1Q14145 624 aa12.65□□□□□ -0.38
CHD1L-210ENST00000622533 CCL14Q16627 93 aa12.65□□□□□ -0.38
CHD1L-210ENST00000622533 FAM174BQ3ZCQ3 159 aa12.65□□□□□ -0.38
CHD1L-210ENST00000622533 TRIM60Q495X7 471 aa12.65□□□□□ -0.38
CHD1L-210ENST00000622533 TJAP1Q5JTD0 557 aa12.65□□□□□ -0.38
CHD1L-210ENST00000622533 RGMBQ6NW40 437 aa12.65□□□□□ -0.38
CHD1L-210ENST00000622533 HORMAD1Q86X24 394 aa12.65□□□□□ -0.38
CHD1L-210ENST00000622533 UBASH3BQ8TF42 649 aa12.65□□□□□ -0.38
CHD1L-210ENST00000622533 OMA1Q96E52 524 aa12.65□□□□□ -0.38
CHD1L-210ENST00000622533 SARS2Q9NP81 518 aaKnown RBP12.65□□□□□ -0.38
CHD1L-210ENST00000622533 TRPM7Q96QT4 1865 aa12.65□□□□□ -0.38
CHD1L-210ENST00000622533 NUP214P35658 2090 aaPredicted RBP12.65□□□□□ -0.38
CHD1L-210ENST00000622533 A0A0D9SEW6 157 aa12.65□□□□□ -0.38
CHD1L-210ENST00000622533 HMX3A6NHT5 357 aa12.65□□□□□ -0.38
CHD1L-210ENST00000622533 ANKRD66B4E2M5 251 aa12.65□□□□□ -0.38
CHD1L-210ENST00000622533 FFAR2O15552 330 aa12.65□□□□□ -0.38
CHD1L-210ENST00000622533 AKR7A2O43488 359 aa12.65□□□□□ -0.38
CHD1L-210ENST00000622533 PRLP01236 227 aa12.65□□□□□ -0.38
CHD1L-210ENST00000622533 PGRP06401 933 aa12.65□□□□□ -0.38
CHD1L-210ENST00000622533 CNPP09543 421 aaKnown RBP12.65□□□□□ -0.38
CHD1L-210ENST00000622533 IL7P13232 177 aa12.65□□□□□ -0.38
CHD1L-210ENST00000622533 GNPDA1P46926 289 aa12.65□□□□□ -0.38
CHD1L-210ENST00000622533 UGT2B15P54855 530 aa12.65□□□□□ -0.38
CHD1L-210ENST00000622533 FKBP1BP68106 108 aa12.65□□□□□ -0.38
CHD1L-210ENST00000622533 RPP38P78345 283 aaKnown RBP12.65□□□□□ -0.38
CHD1L-210ENST00000622533 CACNG1Q06432 222 aa12.65□□□□□ -0.38
CHD1L-210ENST00000622533 BAK1Q16611 211 aa12.65□□□□□ -0.38
CHD1L-210ENST00000622533 PTCHD3Q3KNS1 767 aa12.65□□□□□ -0.38
CHD1L-210ENST00000622533 GLB1LQ6UWU2 654 aa12.65□□□□□ -0.38
CHD1L-210ENST00000622533 SLC46A3Q7Z3Q1 461 aa12.65□□□□□ -0.38
CHD1L-210ENST00000622533 CCDC190Q86UF4 302 aa12.65□□□□□ -0.38
CHD1L-210ENST00000622533 SLC30A2Q9BRI3 323 aa12.65□□□□□ -0.38
CHD1L-210ENST00000622533 P2RY12Q9H244 342 aa12.65□□□□□ -0.38
CHD1L-210ENST00000622533 CLMPQ9H6B4 373 aa12.65□□□□□ -0.38
CHD1L-210ENST00000622533 TMEM39AQ9NV64 488 aa12.65□□□□□ -0.38
CHD1L-210ENST00000622533 KCNN3Q9UGI6 736 aa12.65□□□□□ -0.38
CHD1L-210ENST00000622533 NDRG4Q9ULP0 352 aaKnown RBP12.65□□□□□ -0.38
CHD1L-210ENST00000622533 CCL27Q9Y4X3 112 aa12.65□□□□□ -0.38
CHD1L-210ENST00000622533 RAI2Q9Y5P3 530 aa12.65□□□□□ -0.38
CHD1L-210ENST00000622533 UQCRC1P31930 480 aa12.65□□□□□ -0.39
CHD1L-210ENST00000622533 TNFSF8P32971 234 aa12.65□□□□□ -0.39
CHD1L-210ENST00000622533 ARHGDIAP52565 204 aa12.65□□□□□ -0.39
CHD1L-210ENST00000622533 TAF10Q12962 218 aa12.65□□□□□ -0.39
CHD1L-210ENST00000622533 C18orf21Q32NC0 220 aaPredicted RBP12.65□□□□□ -0.39
CHD1L-210ENST00000622533 GPAT3Q53EU6 434 aa12.65□□□□□ -0.39
CHD1L-210ENST00000622533 KDM4DQ6B0I6 523 aa12.65□□□□□ -0.39
CHD1L-210ENST00000622533 ZNF598Q86UK7 904 aaKnown RBP12.65□□□□□ -0.39
CHD1L-210ENST00000622533 ENTHD1Q8IYW4 607 aa12.65□□□□□ -0.39
CHD1L-210ENST00000622533 LSMEM1Q8N8F7 131 aa12.65□□□□□ -0.39
CHD1L-210ENST00000622533 ATG16L2Q8NAA4 619 aa12.65□□□□□ -0.39
CHD1L-210ENST00000622533 KBTBD8Q8NFY9 601 aa12.65□□□□□ -0.39
CHD1L-210ENST00000622533 SLC7A6Q92536 515 aa12.65□□□□□ -0.39
CHD1L-210ENST00000622533 SIGLEC11Q96RL6 698 aa12.65□□□□□ -0.39
CHD1L-210ENST00000622533 SPON2Q9BUD6 331 aa12.65□□□□□ -0.39
CHD1L-210ENST00000622533 TIGARQ9NQ88 270 aa12.65□□□□□ -0.39
CHD1L-210ENST00000622533 TAS2R16Q9NYV7 291 aa12.65□□□□□ -0.39
CHD1L-210ENST00000622533 KIF17Q9P2E2 1029 aa12.65□□□□□ -0.39
CHD1L-210ENST00000622533 CPA4Q9UI42 421 aa12.65□□□□□ -0.39
CHD1L-210ENST00000622533 PNMA8CA0A1B0GUJ8 204 aa12.64□□□□□ -0.39
CHD1L-210ENST00000622533 OR6C75A6NL08 312 aa12.64□□□□□ -0.39
CHD1L-210ENST00000622533 F8W810 466 aa12.64□□□□□ -0.39
CHD1L-210ENST00000622533 CLDN11O75508 207 aa12.64□□□□□ -0.39
CHD1L-210ENST00000622533 EFNA1P20827 205 aaPredicted RBP12.64□□□□□ -0.39
CHD1L-210ENST00000622533 FCHO2Q0JRZ9 810 aa12.64□□□□□ -0.39
CHD1L-210ENST00000622533 SBSNQ6UWP8 590 aa12.64□□□□□ -0.39
CHD1L-210ENST00000622533 TRIM46Q7Z4K8 759 aa12.64□□□□□ -0.39
CHD1L-210ENST00000622533 NLRP8Q86W28 1048 aa12.64□□□□□ -0.39
CHD1L-210ENST00000622533 KRTCAP2Q8N6L1 136 aa12.64□□□□□ -0.39
CHD1L-210ENST00000622533 OR7D4Q8NG98 312 aa12.64□□□□□ -0.39
CHD1L-210ENST00000622533 CLHC1Q8NHS4 586 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms