RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 Q9Y3F1 56 aa15.29■□□□□ 0.04
NPHP4-211ENST00000622020 PRAMEF4O60810 478 aa15.28■□□□□ 0.04
NPHP4-211ENST00000622020 TRPC1P48995 793 aa15.28■□□□□ 0.04
NPHP4-211ENST00000622020 BCL2A1Q16548 175 aa15.28■□□□□ 0.04
NPHP4-211ENST00000622020 TPRG1LQ5T0D9 272 aa15.28■□□□□ 0.04
NPHP4-211ENST00000622020 GPRC6AQ5T6X5 926 aa15.28■□□□□ 0.04
NPHP4-211ENST00000622020 PRAMEF9Q5VWM5 478 aa15.28■□□□□ 0.04
NPHP4-211ENST00000622020 NEK5Q6P3R8 708 aa15.28■□□□□ 0.04
NPHP4-211ENST00000622020 PRSS48Q7RTY5 328 aa15.28■□□□□ 0.04
NPHP4-211ENST00000622020 TSPYL5Q86VY4 417 aaPredicted RBP15.28■□□□□ 0.04
NPHP4-211ENST00000622020 VRK3Q8IV63 474 aa15.28■□□□□ 0.04
NPHP4-211ENST00000622020 CACTIN-AS1Q8N1I8 211 aa15.28■□□□□ 0.04
NPHP4-211ENST00000622020 TRIB2Q92519 343 aa15.28■□□□□ 0.04
NPHP4-211ENST00000622020 FEVQ99581 238 aa15.28■□□□□ 0.04
NPHP4-211ENST00000622020 NTMT1Q9BV86 223 aa15.28■□□□□ 0.04
NPHP4-211ENST00000622020 TMEM45AQ9NWC5 275 aa15.28■□□□□ 0.04
NPHP4-211ENST00000622020 TMEM98Q9Y2Y6 226 aa15.28■□□□□ 0.04
NPHP4-211ENST00000622020 PCDHGA6Q9Y5G7 932 aa15.28■□□□□ 0.04
NPHP4-211ENST00000622020 DNAJB5O75953 348 aa15.28■□□□□ 0.04
NPHP4-211ENST00000622020 EPN2O95208 641 aa15.28■□□□□ 0.04
NPHP4-211ENST00000622020 GBAP04062 536 aa15.28■□□□□ 0.04
NPHP4-211ENST00000622020 LAMP1P11279 417 aa15.28■□□□□ 0.04
NPHP4-211ENST00000622020 CSKP41240 450 aa15.28■□□□□ 0.04
NPHP4-211ENST00000622020 MAGEA11P43364 429 aa15.28■□□□□ 0.04
NPHP4-211ENST00000622020 KEAP1Q14145 624 aa15.28■□□□□ 0.04
NPHP4-211ENST00000622020 MBTPS1Q14703 1052 aa15.28■□□□□ 0.04
NPHP4-211ENST00000622020 TAF12Q16514 161 aa15.28■□□□□ 0.04
NPHP4-211ENST00000622020 ZC3H12BQ5HYM0 836 aaKnown RBP15.28■□□□□ 0.04
NPHP4-211ENST00000622020 LRIF1Q5T3J3 769 aa15.28■□□□□ 0.04
NPHP4-211ENST00000622020 PLPP6Q8IY26 295 aa15.28■□□□□ 0.04
NPHP4-211ENST00000622020 APCDD1Q8J025 514 aa15.28■□□□□ 0.04
NPHP4-211ENST00000622020 C17orf50Q8WW18 174 aa15.28■□□□□ 0.04
NPHP4-211ENST00000622020 PIH1D2Q8WWB5 315 aa15.28■□□□□ 0.04
NPHP4-211ENST00000622020 GABRQQ9UN88 632 aa15.28■□□□□ 0.04
NPHP4-211ENST00000622020 MAGEB17A8MXT2 336 aa15.27■□□□□ 0.04
NPHP4-211ENST00000622020 H7C0S8 307 aa15.27■□□□□ 0.04
NPHP4-211ENST00000622020 CCR7P32248 378 aa15.27■□□□□ 0.04
NPHP4-211ENST00000622020 MAGEA2P43356 314 aa15.27■□□□□ 0.04
NPHP4-211ENST00000622020 TSTA3Q13630 321 aaPredicted RBP15.27■□□□□ 0.04
NPHP4-211ENST00000622020 HECTD3Q5T447 861 aa15.27■□□□□ 0.04
NPHP4-211ENST00000622020 ZNF648Q5T619 568 aaPredicted RBP15.27■□□□□ 0.04
NPHP4-211ENST00000622020 MFSD4BQ5TF39 518 aa15.27■□□□□ 0.04
NPHP4-211ENST00000622020 LRRC66Q68CR7 880 aa15.27■□□□□ 0.04
NPHP4-211ENST00000622020 NOXRED1Q6NXP6 359 aa15.27■□□□□ 0.04
NPHP4-211ENST00000622020 PTOV1Q86YD1 416 aa15.27■□□□□ 0.04
NPHP4-211ENST00000622020 ZZZ3Q8IYH5 903 aa15.27■□□□□ 0.04
NPHP4-211ENST00000622020 C2orf69Q8N8R5 385 aa15.27■□□□□ 0.04
NPHP4-211ENST00000622020 GPR156Q8NFN8 814 aa15.27■□□□□ 0.04
NPHP4-211ENST00000622020 ATL1Q8WXF7 558 aa15.27■□□□□ 0.04
NPHP4-211ENST00000622020 SLC38A4Q969I6 547 aa15.27■□□□□ 0.04
NPHP4-211ENST00000622020 ERVK13-1Q9NX77 482 aa15.27■□□□□ 0.04
NPHP4-211ENST00000622020 TRPS1Q9UHF7 1281 aa15.27■□□□□ 0.04
NPHP4-211ENST00000622020 RFPL2O75678 378 aa15.27■□□□□ 0.04
NPHP4-211ENST00000622020 ACRV1P26436 265 aa15.27■□□□□ 0.04
NPHP4-211ENST00000622020 COPZ1P61923 177 aa15.27■□□□□ 0.04
NPHP4-211ENST00000622020 GPR17Q13304 367 aa15.27■□□□□ 0.04
NPHP4-211ENST00000622020 FAM180BQ6P0A1 224 aa15.27■□□□□ 0.04
NPHP4-211ENST00000622020 CERS6Q6ZMG9 384 aa15.27■□□□□ 0.04
NPHP4-211ENST00000622020 CYP2U1Q7Z449 544 aa15.27■□□□□ 0.04
NPHP4-211ENST00000622020 PARP16Q8N5Y8 322 aa15.27■□□□□ 0.04
NPHP4-211ENST00000622020 GPR26Q8NDV2 337 aa15.27■□□□□ 0.04
NPHP4-211ENST00000622020 SLC32A1Q9H598 525 aa15.27■□□□□ 0.04
NPHP4-211ENST00000622020 GFRA2O00451 464 aa15.27■□□□□ 0.03
NPHP4-211ENST00000622020 DSCR3O14972 297 aa15.27■□□□□ 0.03
NPHP4-211ENST00000622020 OR1D2P34982 312 aa15.27■□□□□ 0.03
NPHP4-211ENST00000622020 PPP3CCP48454 512 aa15.27■□□□□ 0.03
NPHP4-211ENST00000622020 PLD1Q13393 1074 aa15.27■□□□□ 0.03
NPHP4-211ENST00000622020 CDH18Q13634 790 aa15.27■□□□□ 0.03
NPHP4-211ENST00000622020 UGT8Q16880 541 aa15.27■□□□□ 0.03
NPHP4-211ENST00000622020 PROX2Q3B8N5 592 aa15.27■□□□□ 0.03
NPHP4-211ENST00000622020 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.27■□□□□ 0.036e-10■■■■■ 48.2
NPHP4-211ENST00000622020 ADGRF1Q5T601 910 aa15.27■□□□□ 0.03
NPHP4-211ENST00000622020 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.27■□□□□ 0.03
NPHP4-211ENST00000622020 GATAD2AQ86YP4 633 aa15.27■□□□□ 0.03
NPHP4-211ENST00000622020 LMNTD1Q8N9Z9 388 aa15.27■□□□□ 0.03
NPHP4-211ENST00000622020 RERGLQ9H628 205 aa15.27■□□□□ 0.03
NPHP4-211ENST00000622020 ZNF840PA6NDX5 716 aa15.26■□□□□ 0.03
NPHP4-211ENST00000622020 AGAP5A6NIR3 686 aa15.26■□□□□ 0.03
NPHP4-211ENST00000622020 ASNA1O43681 348 aa15.26■□□□□ 0.03
NPHP4-211ENST00000622020 S100A5P33763 92 aa15.26■□□□□ 0.03
NPHP4-211ENST00000622020 CTSKP43235 329 aa15.26■□□□□ 0.03
NPHP4-211ENST00000622020 CHIT1Q13231 466 aa15.26■□□□□ 0.03
NPHP4-211ENST00000622020 DMC1Q14565 340 aa15.26■□□□□ 0.03
NPHP4-211ENST00000622020 CCBE1Q6UXH8 406 aaPredicted RBP15.26■□□□□ 0.03
NPHP4-211ENST00000622020 NELL1Q92832 810 aa15.26■□□□□ 0.03
NPHP4-211ENST00000622020 ASIC4Q96FT7 647 aa15.26■□□□□ 0.03
NPHP4-211ENST00000622020 SLC22A12Q96S37 553 aa15.26■□□□□ 0.03
NPHP4-211ENST00000622020 COPS8Q99627 209 aa15.26■□□□□ 0.03
NPHP4-211ENST00000622020 TMEM121BQ9BXQ6 578 aaPredicted RBP15.26■□□□□ 0.03
NPHP4-211ENST00000622020 OGDHLQ9ULD0 1010 aa15.26■□□□□ 0.03
NPHP4-211ENST00000622020 FZD4Q9ULV1 537 aa15.26■□□□□ 0.03
NPHP4-211ENST00000622020 SNX6Q9UNH7 406 aa15.26■□□□□ 0.03
NPHP4-211ENST00000622020 CHD5Q8TDI0 1954 aa15.26■□□□□ 0.03
NPHP4-211ENST00000622020 PTHP01270 115 aa15.26■□□□□ 0.03
NPHP4-211ENST00000622020 CCND3P30281 292 aaPredicted RBP15.26■□□□□ 0.03
NPHP4-211ENST00000622020 GRK3P35626 688 aa15.26■□□□□ 0.03
NPHP4-211ENST00000622020 MED22Q15528 200 aa15.26■□□□□ 0.03
NPHP4-211ENST00000622020 LRIT3Q3SXY7 679 aa15.26■□□□□ 0.03
NPHP4-211ENST00000622020 THOC7Q6I9Y2 204 aaKnown RBP15.26■□□□□ 0.03
NPHP4-211ENST00000622020 FUT10Q6P4F1 479 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms