RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 IQCKQ8N0W5 287 aa13.71□□□□□ -0.22
CBWD3-217ENST00000621474 TCAIMQ8N3R3 496 aa13.71□□□□□ -0.22
CBWD3-217ENST00000621474 ZNF248Q8NDW4 579 aa13.71□□□□□ -0.22
CBWD3-217ENST00000621474 OR4K1Q8NGD4 311 aa13.71□□□□□ -0.22
CBWD3-217ENST00000621474 UBTD2Q8WUN7 234 aa13.71□□□□□ -0.22
CBWD3-217ENST00000621474 NAF1Q96HR8 494 aaKnown RBP13.71□□□□□ -0.22
CBWD3-217ENST00000621474 TSNARE1Q96NA8 513 aa13.71□□□□□ -0.22
CBWD3-217ENST00000621474 ZFYVE21Q9BQ24 234 aa13.71□□□□□ -0.22
CBWD3-217ENST00000621474 HAUS8Q9BT25 410 aa13.71□□□□□ -0.22
CBWD3-217ENST00000621474 SPNS1Q9H2V7 528 aa13.71□□□□□ -0.22
CBWD3-217ENST00000621474 AKIRIN1Q9H9L7 192 aaPredicted RBP13.71□□□□□ -0.22
CBWD3-217ENST00000621474 FANCEQ9HB96 536 aa13.71□□□□□ -0.22
CBWD3-217ENST00000621474 TMEM184CQ9NVA4 438 aa13.71□□□□□ -0.22
CBWD3-217ENST00000621474 WWOXQ9NZC7 414 aa13.71□□□□□ -0.22
CBWD3-217ENST00000621474 TMEM216Q9P0N5 145 aa13.71□□□□□ -0.22
CBWD3-217ENST00000621474 LGALS13Q9UHV8 139 aa13.71□□□□□ -0.22
CBWD3-217ENST00000621474 PLCL2Q9UPR0 1127 aa13.71□□□□□ -0.22
CBWD3-217ENST00000621474 PCDHB3Q9Y5E6 796 aa13.71□□□□□ -0.22
CBWD3-217ENST00000621474 PKD1L2Q7Z442 2459 aa13.7□□□□□ -0.22
CBWD3-217ENST00000621474 TLDC2A0PJX2 215 aa13.7□□□□□ -0.22
CBWD3-217ENST00000621474 LRRC14BA6NHZ5 514 aa13.7□□□□□ -0.22
CBWD3-217ENST00000621474 MAP3K7O43318 606 aa13.7□□□□□ -0.22
CBWD3-217ENST00000621474 STK16O75716 305 aa13.7□□□□□ -0.22
CBWD3-217ENST00000621474 WDR47O94967 919 aa13.7□□□□□ -0.22
CBWD3-217ENST00000621474 NTRK1P04629 796 aa13.7□□□□□ -0.22
CBWD3-217ENST00000621474 EZRP15311 586 aaKnown RBP13.7□□□□□ -0.22
CBWD3-217ENST00000621474 RORAP35398 523 aa13.7□□□□□ -0.22
CBWD3-217ENST00000621474 SNRPNP63162 240 aaKnown RBP13.7□□□□□ -0.22
CBWD3-217ENST00000621474 MEF2AQ02078 507 aaPredicted RBP13.7□□□□□ -0.22
CBWD3-217ENST00000621474 ZNF844Q08AG5 666 aa13.7□□□□□ -0.22
CBWD3-217ENST00000621474 SRSF6Q13247 344 aaKnown RBP13.7□□□□□ -0.22
CBWD3-217ENST00000621474 NAA25Q14CX7 972 aa13.7□□□□□ -0.22
CBWD3-217ENST00000621474 ZC3H12BQ5HYM0 836 aaKnown RBP13.7□□□□□ -0.22
CBWD3-217ENST00000621474 ZNF517Q6ZMY9 492 aaPredicted RBP13.7□□□□□ -0.22
CBWD3-217ENST00000621474 TMEM126BQ8IUX1 230 aa13.7□□□□□ -0.22
CBWD3-217ENST00000621474 CNPY4Q8N129 248 aa13.7□□□□□ -0.22
CBWD3-217ENST00000621474 RIBC1Q8N443 379 aaPredicted RBP13.7□□□□□ -0.22
CBWD3-217ENST00000621474 SLC5A11Q8WWX8 675 aa13.7□□□□□ -0.22
CBWD3-217ENST00000621474 NKD1Q969G9 470 aa13.7□□□□□ -0.22
CBWD3-217ENST00000621474 TMEM109Q9BVC6 243 aa13.7□□□□□ -0.22
CBWD3-217ENST00000621474 ROPN1BQ9BZX4 212 aaPredicted RBP13.7□□□□□ -0.22
CBWD3-217ENST00000621474 ROPN1Q9HAT0 212 aaPredicted RBP13.7□□□□□ -0.22
CBWD3-217ENST00000621474 STARD5Q9NSY2 213 aa13.7□□□□□ -0.22
CBWD3-217ENST00000621474 CPSF2Q9P2I0 782 aaKnown RBP13.7□□□□□ -0.22
CBWD3-217ENST00000621474 SERTAD3Q9UJW9 196 aa13.7□□□□□ -0.22
CBWD3-217ENST00000621474 SNX7Q9UNH6 387 aa13.7□□□□□ -0.22
CBWD3-217ENST00000621474 A0A087WV48 116 aa13.69□□□□□ -0.22
CBWD3-217ENST00000621474 FEZF1A0PJY2 475 aa13.69□□□□□ -0.22
CBWD3-217ENST00000621474 FITM1A5D6W6 292 aa13.69□□□□□ -0.22
CBWD3-217ENST00000621474 SYCE1LA8MT33 242 aa13.69□□□□□ -0.22
CBWD3-217ENST00000621474 E7EQ34 232 aa13.69□□□□□ -0.22
CBWD3-217ENST00000621474 ZSCAN9O15535 394 aaPredicted RBP13.69□□□□□ -0.22
CBWD3-217ENST00000621474 ZNF749O43361 778 aa13.69□□□□□ -0.22
CBWD3-217ENST00000621474 OR2B3O76000 313 aa13.69□□□□□ -0.22
CBWD3-217ENST00000621474 IPO13O94829 963 aaKnown RBP13.69□□□□□ -0.22
CBWD3-217ENST00000621474 MED26O95402 600 aa13.69□□□□□ -0.22
CBWD3-217ENST00000621474 RBP1P09455 135 aa13.69□□□□□ -0.22
CBWD3-217ENST00000621474 KRT15P19012 456 aa13.69□□□□□ -0.22
CBWD3-217ENST00000621474 GPS2Q13227 327 aa13.69□□□□□ -0.22
CBWD3-217ENST00000621474 SETDB1Q15047 1291 aa13.69□□□□□ -0.22
CBWD3-217ENST00000621474 PFKFB4Q16877 469 aa13.69□□□□□ -0.22
CBWD3-217ENST00000621474 ZNF385CQ66K41 422 aaPredicted RBP13.69□□□□□ -0.22
CBWD3-217ENST00000621474 VN1R4Q7Z5H5 301 aa13.69□□□□□ -0.22
CBWD3-217ENST00000621474 ADCK2Q7Z695 626 aa13.69□□□□□ -0.22
CBWD3-217ENST00000621474 ARHGEF39Q8N4T4 335 aa13.69□□□□□ -0.22
CBWD3-217ENST00000621474 GALNT6Q8NCL4 622 aa13.69□□□□□ -0.22
CBWD3-217ENST00000621474 ZNF740Q8NDX6 193 aa13.69□□□□□ -0.22
CBWD3-217ENST00000621474 KCNE4Q8WWG9 221 aa13.69□□□□□ -0.22
CBWD3-217ENST00000621474 MRPL57Q9BQC6 102 aaKnown RBP13.69□□□□□ -0.22
CBWD3-217ENST00000621474 SELENOSQ9BQE4 189 aa13.69□□□□□ -0.22
CBWD3-217ENST00000621474 SARGQ9BW04 601 aa13.69□□□□□ -0.22
CBWD3-217ENST00000621474 CD244Q9BZW8 370 aa13.69□□□□□ -0.22
CBWD3-217ENST00000621474 MRPL46Q9H2W6 279 aaKnown RBP13.69□□□□□ -0.22
CBWD3-217ENST00000621474 EMCNQ9ULC0 261 aa13.69□□□□□ -0.22
CBWD3-217ENST00000621474 KCNE2Q9Y6J6 123 aa13.69□□□□□ -0.22
CBWD3-217ENST00000621474 SRRM3A6NNA2 597 aaPredicted RBP13.68□□□□□ -0.22
CBWD3-217ENST00000621474 H0YGG7 62 aa13.68□□□□□ -0.22
CBWD3-217ENST00000621474 P2RX6O15547 441 aa13.68□□□□□ -0.22
CBWD3-217ENST00000621474 LCMT2O60294 686 aaKnown RBP13.68□□□□□ -0.22
CBWD3-217ENST00000621474 RAD1O60671 282 aa13.68□□□□□ -0.22
CBWD3-217ENST00000621474 SRPX2O60687 465 aaPredicted RBP13.68□□□□□ -0.22
CBWD3-217ENST00000621474 CPNE3O75131 537 aaKnown RBP13.68□□□□□ -0.22
CBWD3-217ENST00000621474 SIX3O95343 332 aaPredicted RBP13.68□□□□□ -0.22
CBWD3-217ENST00000621474 MT-ND3P03897 115 aa13.68□□□□□ -0.22
CBWD3-217ENST00000621474 HRH2P25021 359 aa13.68□□□□□ -0.22
CBWD3-217ENST00000621474 ALDH18A1P54886 795 aaKnown RBP13.68□□□□□ -0.22
CBWD3-217ENST00000621474 VSX2P58304 361 aaPredicted RBP13.68□□□□□ -0.22
CBWD3-217ENST00000621474 ARF3P61204 181 aaPredicted RBP13.68□□□□□ -0.22
CBWD3-217ENST00000621474 IFFO1Q0D2I5 559 aa13.68□□□□□ -0.22
CBWD3-217ENST00000621474 CDC16Q13042 620 aa13.68□□□□□ -0.22
CBWD3-217ENST00000621474 MAP7Q14244 749 aa13.68□□□□□ -0.22
CBWD3-217ENST00000621474 LCN10Q6JVE6 187 aa13.68□□□□□ -0.22
CBWD3-217ENST00000621474 C16orf46Q6P387 395 aa13.68□□□□□ -0.22
CBWD3-217ENST00000621474 SLCO4C1Q6ZQN7 724 aa13.68□□□□□ -0.22
CBWD3-217ENST00000621474 TMPRSS11BQ86T26 416 aa13.68□□□□□ -0.22
CBWD3-217ENST00000621474 TRABD2AQ86V40 505 aa13.68□□□□□ -0.22
CBWD3-217ENST00000621474 LCA5Q86VQ0 697 aa13.68□□□□□ -0.22
CBWD3-217ENST00000621474 SPACA3Q8IXA5 215 aa13.68□□□□□ -0.22
CBWD3-217ENST00000621474 NLGN4XQ8N0W4 816 aa13.68□□□□□ -0.22
CBWD3-217ENST00000621474 DTWD1Q8N5C7 304 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms