RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 MLIPQ5VWP3 458 aa18.97■□□□□ 0.63
PDLIM3-212ENST00000620787 CCBE1Q6UXH8 406 aaPredicted RBP18.97■□□□□ 0.63
PDLIM3-212ENST00000620787 RNF19BQ6ZMZ0 732 aa18.97■□□□□ 0.63
PDLIM3-212ENST00000620787 CHST9Q7L1S5 443 aa18.97■□□□□ 0.63
PDLIM3-212ENST00000620787 GDPD3Q7L5L3 318 aa18.97■□□□□ 0.63
PDLIM3-212ENST00000620787 ATL1Q8WXF7 558 aa18.97■□□□□ 0.63
PDLIM3-212ENST00000620787 MYDGFQ969H8 173 aa18.97■□□□□ 0.63
PDLIM3-212ENST00000620787 APOLD1Q96LR9 279 aa18.97■□□□□ 0.63
PDLIM3-212ENST00000620787 PANX1Q96RD7 426 aa18.97■□□□□ 0.63
PDLIM3-212ENST00000620787 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.97■□□□□ 0.63
PDLIM3-212ENST00000620787 ELOVL6Q9H5J4 265 aa18.97■□□□□ 0.63
PDLIM3-212ENST00000620787 TRBV5-4A0A0C4DH59 114 aa18.97■□□□□ 0.63
PDLIM3-212ENST00000620787 A0A1B0GVM2 712 aa18.97■□□□□ 0.63
PDLIM3-212ENST00000620787 RGS13O14921 159 aa18.97■□□□□ 0.63
PDLIM3-212ENST00000620787 NBNO60934 754 aa18.97■□□□□ 0.63
PDLIM3-212ENST00000620787 EPN2O95208 641 aa18.97■□□□□ 0.63
PDLIM3-212ENST00000620787 ALOX12P18054 663 aa18.97■□□□□ 0.63
PDLIM3-212ENST00000620787 S100A5P33763 92 aa18.97■□□□□ 0.63
PDLIM3-212ENST00000620787 GGT2P36268 569 aa18.97■□□□□ 0.63
PDLIM3-212ENST00000620787 ATP5C1P36542 298 aaKnown RBP18.97■□□□□ 0.63
PDLIM3-212ENST00000620787 WNT3P56703 355 aa18.97■□□□□ 0.63
PDLIM3-212ENST00000620787 ZXDCQ2QGD7 858 aaPredicted RBP18.97■□□□□ 0.63
PDLIM3-212ENST00000620787 GGTA1PQ4G0N0 100 aa18.97■□□□□ 0.63
PDLIM3-212ENST00000620787 INO80DQ53TQ3 878 aaPredicted RBP18.97■□□□□ 0.63
PDLIM3-212ENST00000620787 ATXN7L2Q5T6C5 722 aaPredicted RBP18.97■□□□□ 0.63
PDLIM3-212ENST00000620787 RSPO2Q6UXX9 243 aaPredicted RBP18.97■□□□□ 0.63
PDLIM3-212ENST00000620787 MACC1Q6ZN28 852 aa18.97■□□□□ 0.63
PDLIM3-212ENST00000620787 FAM124AQ86V42 546 aa18.97■□□□□ 0.63
PDLIM3-212ENST00000620787 HEATR4Q86WZ0 1026 aa18.97■□□□□ 0.63
PDLIM3-212ENST00000620787 CCDC103Q8IW40 242 aa18.97■□□□□ 0.63
PDLIM3-212ENST00000620787 HOMEZQ8IX15 550 aa18.97■□□□□ 0.63
PDLIM3-212ENST00000620787 KBTBD8Q8NFY9 601 aa18.97■□□□□ 0.63
PDLIM3-212ENST00000620787 PIH1D2Q8WWB5 315 aa18.97■□□□□ 0.63
PDLIM3-212ENST00000620787 OR51E2Q9H255 320 aa18.97■□□□□ 0.63
PDLIM3-212ENST00000620787 TP63Q9H3D4 680 aaPredicted RBP18.97■□□□□ 0.63
PDLIM3-212ENST00000620787 RMI1Q9H9A7 625 aa18.97■□□□□ 0.63
PDLIM3-212ENST00000620787 AMBNQ9NP70 447 aa18.97■□□□□ 0.63
PDLIM3-212ENST00000620787 SNX6Q9UNH7 406 aa18.97■□□□□ 0.63
PDLIM3-212ENST00000620787 LOC100506127A0A0U1RQW1 187 aa18.96■□□□□ 0.63
PDLIM3-212ENST00000620787 OR6C75A6NL08 312 aa18.96■□□□□ 0.63
PDLIM3-212ENST00000620787 SCAMP3O14828 347 aaKnown RBP18.96■□□□□ 0.63
PDLIM3-212ENST00000620787 SCN2BO60939 215 aa18.96■□□□□ 0.63
PDLIM3-212ENST00000620787 RPLP2P05387 115 aaKnown RBP18.96■□□□□ 0.63
PDLIM3-212ENST00000620787 ANXA5P08758 320 aa18.96■□□□□ 0.63
PDLIM3-212ENST00000620787 AMD1P17707 334 aa18.96■□□□□ 0.63
PDLIM3-212ENST00000620787 ITGALP20701 1170 aa18.96■□□□□ 0.63
PDLIM3-212ENST00000620787 CRYBA2P53672 197 aa18.96■□□□□ 0.63
PDLIM3-212ENST00000620787 BOP1Q14137 746 aaKnown RBP18.96■□□□□ 0.63
PDLIM3-212ENST00000620787 UGT8Q16880 541 aa18.96■□□□□ 0.63
PDLIM3-212ENST00000620787 RTN4RL1Q86UN2 441 aaPredicted RBP18.96■□□□□ 0.63
PDLIM3-212ENST00000620787 MMAAQ8IVH4 418 aaKnown RBP18.96■□□□□ 0.63
PDLIM3-212ENST00000620787 ZNF675Q8TD23 568 aa18.96■□□□□ 0.63
PDLIM3-212ENST00000620787 MYO19Q96H55 970 aa18.96■□□□□ 0.63
PDLIM3-212ENST00000620787 TPD52L3Q96J77 140 aa18.96■□□□□ 0.63
PDLIM3-212ENST00000620787 NEK6Q9HC98 313 aa18.96■□□□□ 0.63
PDLIM3-212ENST00000620787 IL26Q9NPH9 171 aa18.96■□□□□ 0.63
PDLIM3-212ENST00000620787 CLCA1A8K7I4 914 aa18.96■□□□□ 0.63
PDLIM3-212ENST00000620787 TLL1O43897 1013 aa18.96■□□□□ 0.63
PDLIM3-212ENST00000620787 KCNJ10P78508 379 aa18.96■□□□□ 0.63
PDLIM3-212ENST00000620787 ABRQ12979 859 aa18.96■□□□□ 0.63
PDLIM3-212ENST00000620787 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.96■□□□□ 0.63
PDLIM3-212ENST00000620787 ZNF621Q6ZSS3 439 aa18.96■□□□□ 0.63
PDLIM3-212ENST00000620787 ADGRG2Q8IZP9 1017 aa18.96■□□□□ 0.63
PDLIM3-212ENST00000620787 NLGN4XQ8N0W4 816 aa18.96■□□□□ 0.63
PDLIM3-212ENST00000620787 SYNPOQ8N3V7 929 aa18.96■□□□□ 0.63
PDLIM3-212ENST00000620787 ITM2CQ9NQX7 267 aa18.96■□□□□ 0.63
PDLIM3-212ENST00000620787 VPS4AQ9UN37 437 aa18.96■□□□□ 0.63
PDLIM3-212ENST00000620787 ZNF451Q9Y4E5 1061 aa18.96■□□□□ 0.63
PDLIM3-212ENST00000620787 PCDHGB6Q9Y5F9 930 aa18.96■□□□□ 0.63
PDLIM3-212ENST00000620787 NOX1Q9Y5S8 564 aa18.96■□□□□ 0.63
PDLIM3-212ENST00000620787 SLC38A8A6NNN8 435 aa18.95■□□□□ 0.62
PDLIM3-212ENST00000620787 MAGEB17A8MXT2 336 aa18.95■□□□□ 0.62
PDLIM3-212ENST00000620787 NPIPB8E9PQR5 432 aa18.95■□□□□ 0.62
PDLIM3-212ENST00000620787 KMOO15229 486 aa18.95■□□□□ 0.62
PDLIM3-212ENST00000620787 COL6A1P12109 1028 aa18.95■□□□□ 0.62
PDLIM3-212ENST00000620787 FAM189BP81408 668 aa18.95■□□□□ 0.62
PDLIM3-212ENST00000620787 NOXRED1Q6NXP6 359 aa18.95■□□□□ 0.62
PDLIM3-212ENST00000620787 SPATC1Q76KD6 591 aa18.95■□□□□ 0.62
PDLIM3-212ENST00000620787 ZSWIM9Q86XI8 627 aa18.95■□□□□ 0.62
PDLIM3-212ENST00000620787 CELF2-AS1Q8N7Q2 184 aa18.95■□□□□ 0.62
PDLIM3-212ENST00000620787 IL17RDQ8NFM7 739 aa18.95■□□□□ 0.62
PDLIM3-212ENST00000620787 TTPALQ9BTX7 342 aa18.95■□□□□ 0.62
PDLIM3-212ENST00000620787 CENPOQ9BU64 300 aa18.95■□□□□ 0.62
PDLIM3-212ENST00000620787 EBPLQ9BY08 206 aa18.95■□□□□ 0.62
PDLIM3-212ENST00000620787 ARL15Q9NXU5 204 aa18.95■□□□□ 0.62
PDLIM3-212ENST00000620787 FCF1Q9Y324 198 aaKnown RBP18.95■□□□□ 0.62
PDLIM3-212ENST00000620787 ADORA3P0DMS8 318 aa18.95■□□□□ 0.62
PDLIM3-212ENST00000620787 CORO1AP31146 461 aaKnown RBP18.95■□□□□ 0.62
PDLIM3-212ENST00000620787 RRM2P31350 389 aa18.95■□□□□ 0.62
PDLIM3-212ENST00000620787 PXNP49023 591 aaPredicted RBP18.95■□□□□ 0.62
PDLIM3-212ENST00000620787 RHOAP61586 193 aa18.95■□□□□ 0.62
PDLIM3-212ENST00000620787 DUSP4Q13115 394 aa18.95■□□□□ 0.62
PDLIM3-212ENST00000620787 ARMC12Q5T9G4 340 aa18.95■□□□□ 0.62
PDLIM3-212ENST00000620787 THOC7Q6I9Y2 204 aaKnown RBP18.95■□□□□ 0.62
PDLIM3-212ENST00000620787 NEK5Q6P3R8 708 aa18.95■□□□□ 0.62
PDLIM3-212ENST00000620787 RAD9AQ99638 391 aa18.95■□□□□ 0.62
PDLIM3-212ENST00000620787 GPR62Q9BZJ7 368 aa18.95■□□□□ 0.62
PDLIM3-212ENST00000620787 CWH43Q9H720 699 aa18.95■□□□□ 0.62
PDLIM3-212ENST00000620787 ZFYVE1Q9HBF4 777 aa18.95■□□□□ 0.62
PDLIM3-212ENST00000620787 TMEM184CQ9NVA4 438 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms