RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 ABRQ12979 859 aa10.08□□□□□ -0.8
VPS11-207ENST00000620429 ADAM15Q13444 863 aa10.08□□□□□ -0.8
VPS11-207ENST00000620429 TBCEQ15813 527 aaPredicted RBP10.08□□□□□ -0.8
VPS11-207ENST00000620429 PLET1Q6UQ28 207 aa10.08□□□□□ -0.8
VPS11-207ENST00000620429 MACC1Q6ZN28 852 aa10.08□□□□□ -0.8
VPS11-207ENST00000620429 C11orf96Q7Z7L8 435 aa10.08□□□□□ -0.8
VPS11-207ENST00000620429 KRT73Q86Y46 540 aa10.08□□□□□ -0.8
VPS11-207ENST00000620429 PPTC7Q8NI37 304 aa10.08□□□□□ -0.8
VPS11-207ENST00000620429 PHOSPHO2Q8TCD6 241 aa10.08□□□□□ -0.8
VPS11-207ENST00000620429 TSPEARQ8WU66 669 aa10.08□□□□□ -0.8
VPS11-207ENST00000620429 ARL5BQ96KC2 179 aa10.08□□□□□ -0.8
VPS11-207ENST00000620429 ESRP2Q9H6T0 727 aaKnown RBP10.08□□□□□ -0.8
VPS11-207ENST00000620429 C8orf33Q9H7E9 229 aaPredicted RBP10.08□□□□□ -0.8
VPS11-207ENST00000620429 CDHR5Q9HBB8 845 aa10.08□□□□□ -0.8
VPS11-207ENST00000620429 MED9Q9NWA0 146 aa10.08□□□□□ -0.8
VPS11-207ENST00000620429 MCUBQ9NWR8 336 aa10.08□□□□□ -0.8
VPS11-207ENST00000620429 TMEFF2Q9UIK5 374 aaPredicted RBP10.08□□□□□ -0.8
VPS11-207ENST00000620429 KIF25Q9UIL4 384 aa10.08□□□□□ -0.8
VPS11-207ENST00000620429 NME7Q9Y5B8 376 aa10.08□□□□□ -0.8
VPS11-207ENST00000620429 V9GYQ6 96 aa10.08□□□□□ -0.8
VPS11-207ENST00000620429 SLC22A23A1A5C7 686 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 EFCAB10A6NFE3 127 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 MFSD2BA6NFX1 497 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 FAM20BO75063 409 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 MT-CO1P00395 513 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 CAPZA2P47755 286 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 GBX1Q14549 363 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 LARS2Q15031 903 aaKnown RBP10.07□□□□□ -0.8
VPS11-207ENST00000620429 TIGD6Q17RP2 521 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 PTCHD3Q3KNS1 767 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 GPR33Q49SQ1 333 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 PRSS36Q5K4E3 855 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 TMPRSS11AQ6ZMR5 421 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 GPR142Q7Z601 462 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 CYP4Z2PQ8N1L4 340 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 ZNF431Q8TF32 576 aaPredicted RBP10.07□□□□□ -0.8
VPS11-207ENST00000620429 PTPN18Q99952 460 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 DPYSL5Q9BPU6 564 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 GSX2Q9BZM3 304 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 TINAGL1Q9GZM7 467 aaPredicted RBP10.07□□□□□ -0.8
VPS11-207ENST00000620429 SLC52A3Q9NQ40 469 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 TRPM5Q9NZQ8 1165 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 ING4Q9UNL4 249 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 PCDHGA9Q9Y5G4 932 aaKnown RBP10.07□□□□□ -0.8
VPS11-207ENST00000620429 KLK4Q9Y5K2 254 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 ORC6Q9Y5N6 252 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 SESN1Q9Y6P5 492 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 PDE4DIPQ5VU43 2346 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 PIPSLA2A3N6 862 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 PPEF2O14830 753 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 ANKRD28O15084 1053 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 NUPL2O15504 423 aaKnown RBP10.07□□□□□ -0.8
VPS11-207ENST00000620429 CYP2B6P20813 491 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 MATKP42679 507 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 NRIP1P48552 1158 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 RAB10P61026 200 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 CTBP1Q13363 440 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 PAFAH1B3Q15102 231 aaKnown RBP10.07□□□□□ -0.8
VPS11-207ENST00000620429 GRIK4Q16099 956 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 FLYWCH1Q4VC44 716 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 RABL3Q5HYI8 236 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 ARHGAP36Q6ZRI8 547 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 RPS27LQ71UM5 84 aaKnown RBP10.07□□□□□ -0.8
VPS11-207ENST00000620429 RNF130Q86XS8 419 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 NT5DC4Q86YG4 428 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 SPATA2LQ8IUW3 424 aaPredicted RBP10.07□□□□□ -0.8
VPS11-207ENST00000620429 CEP97Q8IW35 865 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 ZZZ3Q8IYH5 903 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 ZNF565Q8N9K5 539 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 DUSP18Q8NEJ0 188 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 OR5K1Q8NHB7 308 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 KIAA1191Q96A73 305 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 RADILQ96JH8 1075 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 MNTQ99583 582 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 RHNO1Q9BSD3 238 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 EML4Q9HC35 981 aaKnown RBP10.07□□□□□ -0.8
VPS11-207ENST00000620429 PPP1R14DQ9NXH3 145 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 NSMCE4AQ9NXX6 385 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 SHROOM3Q8TF72 1996 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 CITO14578 2027 aa10.07□□□□□ -0.8
VPS11-207ENST00000620429 POU2F1P14859 743 aa10.06□□□□□ -0.8
VPS11-207ENST00000620429 NFKB1P19838 968 aa10.06□□□□□ -0.8
VPS11-207ENST00000620429 KCNA5P22460 613 aa10.06□□□□□ -0.8
VPS11-207ENST00000620429 YWHAQP27348 245 aa10.06□□□□□ -0.8
VPS11-207ENST00000620429 HK3P52790 923 aa10.06□□□□□ -0.8
VPS11-207ENST00000620429 RPP38P78345 283 aaKnown RBP10.06□□□□□ -0.8
VPS11-207ENST00000620429 HOXC5Q00444 222 aa10.06□□□□□ -0.8
VPS11-207ENST00000620429 SP3Q02447 781 aa10.06□□□□□ -0.8
VPS11-207ENST00000620429 ETFDHQ16134 617 aa10.06□□□□□ -0.8
VPS11-207ENST00000620429 SLC25A52Q3SY17 297 aa10.06□□□□□ -0.8
VPS11-207ENST00000620429 CYP27C1Q4G0S4 372 aa10.06□□□□□ -0.8
VPS11-207ENST00000620429 SAXO2Q658L1 398 aa10.06□□□□□ -0.8
VPS11-207ENST00000620429 KCTD11Q693B1 232 aa10.06□□□□□ -0.8
VPS11-207ENST00000620429 ANKRD34AQ69YU3 496 aa10.06□□□□□ -0.8
VPS11-207ENST00000620429 USP45Q70EL2 814 aa10.06□□□□□ -0.8
VPS11-207ENST00000620429 DENND6AQ8IWF6 608 aa10.06□□□□□ -0.8
VPS11-207ENST00000620429 HS3ST5Q8IZT8 346 aa10.06□□□□□ -0.8
VPS11-207ENST00000620429 ITFG1Q8TB96 612 aa10.06□□□□□ -0.8
VPS11-207ENST00000620429 GPR78Q96P69 363 aa10.06□□□□□ -0.8
VPS11-207ENST00000620429 KCNS3Q9BQ31 491 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms