RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 STX3Q13277 289 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 BMPR2Q13873 1038 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 TAF11Q15544 211 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 SPRED3Q2MJR0 410 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.07□□□□□ -1.6
SHMT1-211ENST00000618902 PLEKHS1Q5SXH7 462 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 GRTP1Q5TC63 336 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 LRRC8EQ6NSJ5 796 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 CGB2Q6NT52 195 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 MBOAT1Q6ZNC8 495 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 FAM47EQ6ZV65 393 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 GPR155Q7Z3F1 870 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 CMC1Q7Z7K0 106 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 DTX1Q86Y01 620 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 CTAGE3PQ8IX95 158 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 FAM20CQ8IXL6 584 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 ADGRF3Q8IZF5 1079 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 C4orf33Q8N1A6 199 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 PIP4P2Q8N4L2 257 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 RAB42Q8N4Z0 105 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 C2orf73Q8N5S3 287 aaPredicted RBP5.07□□□□□ -1.6
SHMT1-211ENST00000618902 LINC01555Q8NAE3 123 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 OR52E1Q8NGJ3 308 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 PIWIL2Q8TC59 973 aaKnown RBP5.07□□□□□ -1.6
SHMT1-211ENST00000618902 EEF1AKMT1Q8WVE0 214 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 DNAJC9Q8WXX5 260 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 KLHL6Q8WZ60 621 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 JADE3Q92613 823 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 PMEPA1Q969W9 287 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 PTCD3Q96EY7 689 aaKnown RBP5.07□□□□□ -1.6
SHMT1-211ENST00000618902 PRR11Q96HE9 360 aaPredicted RBP5.07□□□□□ -1.6
SHMT1-211ENST00000618902 ELMO2Q96JJ3 720 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 LRFN5Q96NI6 719 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 PANX3Q96QZ0 392 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 FERD3LQ96RJ6 166 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 CCNL2Q96S94 520 aaPredicted RBP5.07□□□□□ -1.6
SHMT1-211ENST00000618902 GPR22Q99680 433 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 RBBP8Q99708 897 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 CPNE1Q99829 537 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 RAB11FIP5Q9BXF6 653 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 UNKQ9C0B0 810 aaKnown RBP5.07□□□□□ -1.6
SHMT1-211ENST00000618902 SEMA6CQ9H3T2 930 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 ZNF768Q9H5H4 540 aaKnown RBP5.07□□□□□ -1.6
SHMT1-211ENST00000618902 KIR3DX1Q9H7L2 352 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 ENAMQ9NRM1 1142 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 C1GALT1Q9NS00 363 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 SPHK1Q9NYA1 384 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 UTP6Q9NYH9 597 aaKnown RBP5.07□□□□□ -1.6
SHMT1-211ENST00000618902 OR6C2Q9NZP2 312 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 TAGLN3Q9UI15 199 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 SCOCQ9UIL1 159 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 TRMT6Q9UJA5 497 aaKnown RBP5.07□□□□□ -1.6
SHMT1-211ENST00000618902 HAO1Q9UJM8 370 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 ADAMTS6Q9UKP5 1117 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 TRIM33Q9UPN9 1127 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 SATB2Q9UPW6 733 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 VWA7Q9Y334 891 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 LOXL2Q9Y4K0 774 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 PCM1Q15154 2024 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 ASH1LQ9NR48 2969 aaKnown RBP5.06□□□□□ -1.6
SHMT1-211ENST00000618902 BAHCC1Q9P281 2608 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 A0A0G2JND7 137 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 DYTNA2CJ06 578 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 OR6C74A6NCV1 312 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 OR5K3A6NET4 321 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 TLCD2A6NGC4 264 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 ENO4A6NNW6 628 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 ZNF839A8K0R7 811 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 CAPN14A8MX76 684 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 C21orf140B9A014 251 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 E5RI56 91 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 GFYI3L273 518 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 K7ENP7 123 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 TAF4O00268 1085 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 CDC7O00311 574 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 BTN3A1O00481 513 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 CLGNO14967 610 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 POLR1CO15160 346 aaPredicted RBP5.06□□□□□ -1.6
SHMT1-211ENST00000618902 PRICKLE3O43900 615 aaPredicted RBP5.06□□□□□ -1.6
SHMT1-211ENST00000618902 PEX1O43933 1283 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 KLHL41O60662 606 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 SNNO75324 88 aaPredicted RBP5.06□□□□□ -1.6
SHMT1-211ENST00000618902 PSIP1O75475 530 aaKnown RBP5.06□□□□□ -1.6
SHMT1-211ENST00000618902 ZBTB11O95625 1053 aaPredicted RBP5.06□□□□□ -1.6
SHMT1-211ENST00000618902 ALDOAP04075 364 aaKnown RBP5.06□□□□□ -1.6
SHMT1-211ENST00000618902 BPGMP07738 259 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 HBQ1P09105 142 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 SLC35E2BP0CK96 405 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 MPC1LP0DKB6 136 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 COL6A2P12110 1019 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 HGFP14210 728 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 AMD1P17707 334 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 POLR2CP19387 275 aaPredicted RBP5.06□□□□□ -1.6
SHMT1-211ENST00000618902 SAT1P21673 171 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 PKLRP30613 574 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 SHMT2P34897 504 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 SPRP35270 261 aaPredicted RBP5.06□□□□□ -1.6
SHMT1-211ENST00000618902 PGM1P36871 562 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 SERPINB5P36952 375 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 ETV5P41161 510 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms