RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, human

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C11orf54-215	ENST00000617482	FAM9C	Q8IZT9	166 aa		11.43	□□□□□ -0.58
C11orf54-215	ENST00000617482	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	11.43	□□□□□ -0.58
C11orf54-215	ENST00000617482	CD99L2	Q8TCZ2	262 aa		11.43	□□□□□ -0.58
C11orf54-215	ENST00000617482	RAET1E	Q8TD07	263 aa		11.43	□□□□□ -0.58
C11orf54-215	ENST00000617482	HSH2D	Q96JZ2	352 aa		11.43	□□□□□ -0.58
C11orf54-215	ENST00000617482	TSEN34	Q9BSV6	310 aa	Known RBP	11.43	□□□□□ -0.58
C11orf54-215	ENST00000617482	SUV39H2	Q9H5I1	410 aa		11.43	□□□□□ -0.58
C11orf54-215	ENST00000617482	ZDHHC6	Q9H6R6	413 aa		11.43	□□□□□ -0.58
C11orf54-215	ENST00000617482	HMG20A	Q9NP66	347 aa		11.43	□□□□□ -0.58
C11orf54-215	ENST00000617482	KRT84	Q9NSB2	600 aa		11.43	□□□□□ -0.58
C11orf54-215	ENST00000617482	DNAJC11	Q9NVH1	559 aa		11.43	□□□□□ -0.58
C11orf54-215	ENST00000617482	KIAA1522	Q9P206	1035 aa	Predicted RBP	11.43	□□□□□ -0.58
C11orf54-215	ENST00000617482	SRRD	Q9UH36	339 aa		11.43	□□□□□ -0.58
C11orf54-215	ENST00000617482	BTBD3	Q9Y2F9	522 aa		11.43	□□□□□ -0.58
C11orf54-215	ENST00000617482	TMED5	Q9Y3A6	229 aa		11.43	□□□□□ -0.58
C11orf54-215	ENST00000617482	TMEM247	A6NEH6	219 aa		11.43	□□□□□ -0.58
C11orf54-215	ENST00000617482	SCN2B	O60939	215 aa		11.43	□□□□□ -0.58
C11orf54-215	ENST00000617482	FAM20B	O75063	409 aa		11.43	□□□□□ -0.58
C11orf54-215	ENST00000617482	UGT2B4	P06133	528 aa		11.43	□□□□□ -0.58
C11orf54-215	ENST00000617482	NUDT7	P0C024	238 aa		11.43	□□□□□ -0.58
C11orf54-215	ENST00000617482	LAMP1	P11279	417 aa		11.43	□□□□□ -0.58
C11orf54-215	ENST00000617482	SRC	P12931	536 aa		11.43	□□□□□ -0.58
C11orf54-215	ENST00000617482	ATP1B2	P14415	290 aa	Predicted RBP	11.43	□□□□□ -0.58
C11orf54-215	ENST00000617482	JUND	P17535	347 aa		11.43	□□□□□ -0.58
C11orf54-215	ENST00000617482	CD22	P20273	847 aa		11.43	□□□□□ -0.58
C11orf54-215	ENST00000617482	FPR1	P21462	350 aa		11.43	□□□□□ -0.58
C11orf54-215	ENST00000617482	TPP2	P29144	1249 aa	Predicted RBP	11.43	□□□□□ -0.58
C11orf54-215	ENST00000617482	TGFBR1	P36897	503 aa		11.43	□□□□□ -0.58
C11orf54-215	ENST00000617482	HNMT	P50135	292 aa		11.43	□□□□□ -0.58
C11orf54-215	ENST00000617482	PFN3	P60673	137 aa		11.43	□□□□□ -0.58
C11orf54-215	ENST00000617482	IRF8	Q02556	426 aa		11.43	□□□□□ -0.58
C11orf54-215	ENST00000617482	FPGS	Q05932	587 aa		11.43	□□□□□ -0.58
C11orf54-215	ENST00000617482	ACOX1	Q15067	660 aa		11.43	□□□□□ -0.58
C11orf54-215	ENST00000617482	TPGS2	Q68CL5	300 aa		11.43	□□□□□ -0.58
C11orf54-215	ENST00000617482	TMCO2	Q7Z6W1	182 aa	Predicted RBP	11.43	□□□□□ -0.58
C11orf54-215	ENST00000617482	P2RY8	Q86VZ1	359 aa		11.43	□□□□□ -0.58
C11orf54-215	ENST00000617482	CCDC71	Q8IV32	467 aa	Predicted RBP	11.43	□□□□□ -0.58
C11orf54-215	ENST00000617482	CMTM8	Q8IZV2	173 aa		11.43	□□□□□ -0.58
C11orf54-215	ENST00000617482	CSGALNACT1	Q8TDX6	532 aa		11.43	□□□□□ -0.58
C11orf54-215	ENST00000617482	MAL2	Q969L2	176 aa		11.43	□□□□□ -0.58
C11orf54-215	ENST00000617482	SH3KBP1	Q96B97	665 aa		11.43	□□□□□ -0.58
C11orf54-215	ENST00000617482	ERLEC1	Q96DZ1	483 aa		11.43	□□□□□ -0.58
C11orf54-215	ENST00000617482	ALPK1	Q96QP1	1244 aa		11.43	□□□□□ -0.58
C11orf54-215	ENST00000617482	APOL4	Q9BPW4	351 aa		11.43	□□□□□ -0.58
C11orf54-215	ENST00000617482	GABARAPL1	Q9H0R8	117 aa		11.43	□□□□□ -0.58
C11orf54-215	ENST00000617482	AKIP1	Q9NQ31	210 aa		11.43	□□□□□ -0.58
C11orf54-215	ENST00000617482	SIRT5	Q9NXA8	310 aa		11.43	□□□□□ -0.58
C11orf54-215	ENST00000617482	PNMA8B	Q9ULN7	279 aa	Predicted RBP	11.43	□□□□□ -0.58
C11orf54-215	ENST00000617482	CASP8AP2	Q9UKL3	1982 aa		11.43	□□□□□ -0.58
C11orf54-215	ENST00000617482	NTRK1	P04629	796 aa		11.42	□□□□□ -0.58
C11orf54-215	ENST00000617482	GJA1	P17302	382 aa		11.42	□□□□□ -0.58
C11orf54-215	ENST00000617482	PRPH2	P23942	346 aa		11.42	□□□□□ -0.58
C11orf54-215	ENST00000617482	ACVR2A	P27037	513 aa		11.42	□□□□□ -0.58
C11orf54-215	ENST00000617482	HPCAL1	P37235	193 aa		11.42	□□□□□ -0.58
C11orf54-215	ENST00000617482	TRPC1	P48995	793 aa		11.42	□□□□□ -0.58
C11orf54-215	ENST00000617482	CASP9	P55211	416 aa		11.42	□□□□□ -0.58
C11orf54-215	ENST00000617482	SNRPD1	P62314	119 aa	Known RBP	11.42	□□□□□ -0.58
C11orf54-215	ENST00000617482	SRSF11	Q05519	484 aa	Known RBP	11.42	□□□□□ -0.58
C11orf54-215	ENST00000617482	CD300C	Q08708	224 aa		11.42	□□□□□ -0.58
C11orf54-215	ENST00000617482	KEAP1	Q14145	624 aa		11.42	□□□□□ -0.58
C11orf54-215	ENST00000617482	XKR6	Q5GH73	641 aa		11.42	□□□□□ -0.58
C11orf54-215	ENST00000617482	CDKL4	Q5MAI5	379 aa		11.42	□□□□□ -0.58
C11orf54-215	ENST00000617482	ZNF648	Q5T619	568 aa	Predicted RBP	11.42	□□□□□ -0.58
C11orf54-215	ENST00000617482	ADCK1	Q86TW2	530 aa		11.42	□□□□□ -0.58
C11orf54-215	ENST00000617482	RNF168	Q8IYW5	571 aa	Predicted RBP	11.42	□□□□□ -0.58
C11orf54-215	ENST00000617482	ELMOD1	Q8N336	334 aa		11.42	□□□□□ -0.58
C11orf54-215	ENST00000617482	TCAIM	Q8N3R3	496 aa		11.42	□□□□□ -0.58
C11orf54-215	ENST00000617482	RPL3L	Q92901	407 aa	Known RBP	11.42	□□□□□ -0.58
C11orf54-215	ENST00000617482	FOXJ1	Q92949	421 aa		11.42	□□□□□ -0.58
C11orf54-215	ENST00000617482	SCAMP4	Q969E2	229 aa		11.42	□□□□□ -0.58
C11orf54-215	ENST00000617482	TAMM41	Q96BW9	452 aa		11.42	□□□□□ -0.58
C11orf54-215	ENST00000617482	HHIP	Q96QV1	700 aa		11.42	□□□□□ -0.58
C11orf54-215	ENST00000617482	LYSMD1	Q96S90	227 aa		11.42	□□□□□ -0.58
C11orf54-215	ENST00000617482	SMG9	Q9H0W8	520 aa	Known RBP	11.42	□□□□□ -0.58
C11orf54-215	ENST00000617482	IL21	Q9HBE4	155 aa		11.42	□□□□□ -0.58
C11orf54-215	ENST00000617482	THUMPD1	Q9NXG2	353 aa	Known RBP	11.42	□□□□□ -0.58
C11orf54-215	ENST00000617482	VPS29	Q9UBQ0	182 aa		11.42	□□□□□ -0.58
C11orf54-215	ENST00000617482	RPS6KA6	Q9UK32	745 aa		11.42	□□□□□ -0.58
C11orf54-215	ENST00000617482	LSM7	Q9UK45	103 aa	Known RBP	11.42	□□□□□ -0.58
C11orf54-215	ENST00000617482	NDRG4	Q9ULP0	352 aa	Known RBP	11.42	□□□□□ -0.58
C11orf54-215	ENST00000617482	PMF1-BGLAP	U3KQ54	211 aa		11.42	□□□□□ -0.58
C11orf54-215	ENST00000617482	GFY	I3L273	518 aa		11.41	□□□□□ -0.58
C11orf54-215	ENST00000617482	KPNA4	O00629	521 aa	Predicted RBP	11.41	□□□□□ -0.58
C11orf54-215	ENST00000617482	SLC22A1	O15245	554 aa		11.41	□□□□□ -0.58
C11orf54-215	ENST00000617482	RGS10	O43665	173 aa		11.41	□□□□□ -0.58
C11orf54-215	ENST00000617482	NUAK1	O60285	661 aa		11.41	□□□□□ -0.58
C11orf54-215	ENST00000617482	PQBP1	O60828	265 aa	Known RBP	11.41	□□□□□ -0.58
C11orf54-215	ENST00000617482	JRK	O75564	520 aa		11.41	□□□□□ -0.58
C11orf54-215	ENST00000617482	SERPINB7	O75635	380 aa		11.41	□□□□□ -0.58
C11orf54-215	ENST00000617482	SOD2	P04179	222 aa		11.41	□□□□□ -0.58
C11orf54-215	ENST00000617482	C1S	P09871	688 aa		11.41	□□□□□ -0.58
C11orf54-215	ENST00000617482	JUP	P14923	745 aa		11.41	□□□□□ -0.58
C11orf54-215	ENST00000617482	HOXB6	P17509	224 aa	Known RBP	11.41	□□□□□ -0.58
C11orf54-215	ENST00000617482	GPX2	P18283	190 aa		11.41	□□□□□ -0.58
C11orf54-215	ENST00000617482	CYP2A7	P20853	494 aa		11.41	□□□□□ -0.58
C11orf54-215	ENST00000617482	GABRR2	P28476	465 aa		11.41	□□□□□ -0.58
C11orf54-215	ENST00000617482	SPINT3	P49223	89 aa		11.41	□□□□□ -0.58
C11orf54-215	ENST00000617482	ST13	P50502	369 aa	Known RBP	11.41	□□□□□ -0.58
C11orf54-215	ENST00000617482	RPP38	P78345	283 aa	Known RBP	11.41	□□□□□ -0.58
C11orf54-215	ENST00000617482	IFITM3	Q01628	133 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms