RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 LRFN5Q96NI6 719 aa8.25□□□□□ -1.09
GPC6-202ENST00000617456 ZNF570Q96NI8 536 aa8.25□□□□□ -1.09
GPC6-202ENST00000617456 TTC1Q99614 292 aa8.25□□□□□ -1.09
GPC6-202ENST00000617456 FICDQ9BVA6 458 aa8.25□□□□□ -1.09
GPC6-202ENST00000617456 CHRNA10Q9GZZ6 450 aa8.25□□□□□ -1.09
GPC6-202ENST00000617456 TFB2MQ9H5Q4 396 aaKnown RBP8.25□□□□□ -1.09
GPC6-202ENST00000617456 MVB12BQ9H7P6 319 aa8.25□□□□□ -1.09
GPC6-202ENST00000617456 NLE1Q9NVX2 485 aaPredicted RBP8.25□□□□□ -1.09
GPC6-202ENST00000617456 ZDHHC3Q9NYG2 299 aa8.25□□□□□ -1.09
GPC6-202ENST00000617456 C5AR2Q9P296 337 aa8.25□□□□□ -1.09
GPC6-202ENST00000617456 FAM8A1Q9UBU6 413 aa8.25□□□□□ -1.09
GPC6-202ENST00000617456 OSGIN2Q9Y236 505 aa8.25□□□□□ -1.09
GPC6-202ENST00000617456 CFL2Q9Y281 166 aa8.25□□□□□ -1.09
GPC6-202ENST00000617456 BTRCQ9Y297 605 aa8.25□□□□□ -1.09
GPC6-202ENST00000617456 NTNG1Q9Y2I2 539 aa8.25□□□□□ -1.09
GPC6-202ENST00000617456 LRRC42Q9Y546 428 aa8.25□□□□□ -1.09
GPC6-202ENST00000617456 ARL5AQ9Y689 179 aa8.25□□□□□ -1.09
GPC6-202ENST00000617456 COMMD3-BMI1R4GMX3 469 aa8.25□□□□□ -1.09
GPC6-202ENST00000617456 ZGRF1Q86YA3 2104 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 MTORP42345 2549 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 GSAPA4D1B5 854 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 DPPA5A6NC42 116 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 MROH6A6NGR9 719 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 OR2AG2A6NM03 316 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 C9J4A7 227 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 PRSS44E7EML9 344 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 GPR39O43194 453 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 ZG16O60844 167 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 SUN1O94901 812 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 ANP32DO95626 131 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 GAS8O95995 478 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 SLC35G4P0C7Q5 338 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 POLR2CP19387 275 aaPredicted RBP8.24□□□□□ -1.09
GPC6-202ENST00000617456 CDH3P22223 829 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 ACRV1P26436 265 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 PPARGP37231 505 aaPredicted RBP8.24□□□□□ -1.09
GPC6-202ENST00000617456 NSG1P42857 185 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 PREPP48147 710 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 PER3P56645 1201 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 LRRC74AQ0VAA2 488 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 BNIP1Q12981 228 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 ITIH4Q14624 930 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 NCF4Q15080 339 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 PPP1R7Q15435 360 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 TMEM95Q3KNT9 176 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 ANKDD1AQ495B1 522 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 ZNF658BQ4V348 819 aaPredicted RBP8.24□□□□□ -1.09
GPC6-202ENST00000617456 FNBP1LQ5T0N5 605 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 GKAP1Q5VSY0 366 aaPredicted RBP8.24□□□□□ -1.09
GPC6-202ENST00000617456 MLIPQ5VWP3 458 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 TTC23LQ6PF05 361 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 CORO6Q6QEF8 472 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 USP51Q70EK9 711 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 DET1Q7L5Y6 550 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 MRGPREQ86SM8 312 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 CUZD1Q86UP6 607 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 TMEM139Q8IV31 216 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 GALNT16Q8N428 558 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 LSMEM1Q8N8F7 131 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 CLEC1AQ8NC01 280 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 ACVR1CQ8NER5 493 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 C12orf66Q96MD2 445 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 INSM2Q96T92 566 aaPredicted RBP8.24□□□□□ -1.09
GPC6-202ENST00000617456 DPH2Q9BQC3 489 aaPredicted RBP8.24□□□□□ -1.09
GPC6-202ENST00000617456 KLHL4Q9C0H6 718 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 KLHL25Q9H0H3 589 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 WWP1Q9H0M0 922 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 ZBTB20Q9HC78 741 aaPredicted RBP8.24□□□□□ -1.09
GPC6-202ENST00000617456 AGPAT4Q9NRZ5 378 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 C1GALT1Q9NS00 363 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 PIH1D1Q9NWS0 290 aaKnown RBP8.24□□□□□ -1.09
GPC6-202ENST00000617456 SLC24A2Q9UI40 661 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 CRLS1Q9UJA2 301 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 ENTPD4Q9Y227 616 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 PADI2Q9Y2J8 665 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 PKDREJQ9NTG1 2253 aa8.24□□□□□ -1.09
GPC6-202ENST00000617456 PCSK5Q92824 1860 aa8.23□□□□□ -1.09
GPC6-202ENST00000617456 MACROD2A1Z1Q3 448 aa8.23□□□□□ -1.09
GPC6-202ENST00000617456 PEX12O00623 359 aa8.23□□□□□ -1.09
GPC6-202ENST00000617456 SUPT3HO75486 399 aa8.23□□□□□ -1.09
GPC6-202ENST00000617456 FKBP9O95302 570 aa8.23□□□□□ -1.09
GPC6-202ENST00000617456 ATP6V1G2O95670 118 aa8.23□□□□□ -1.09
GPC6-202ENST00000617456 CD63P08962 238 aa8.23□□□□□ -1.09
GPC6-202ENST00000617456 GSTT2P0CG29 244 aa8.23□□□□□ -1.09
GPC6-202ENST00000617456 GSTT2BP0CG30 244 aa8.23□□□□□ -1.09
GPC6-202ENST00000617456 FUT4P22083 530 aa8.23□□□□□ -1.09
GPC6-202ENST00000617456 PRKACBP22694 351 aa8.23□□□□□ -1.09
GPC6-202ENST00000617456 CCND1P24385 295 aa8.23□□□□□ -1.09
GPC6-202ENST00000617456 FDFT1P37268 417 aa8.23□□□□□ -1.09
GPC6-202ENST00000617456 FOXL2P58012 376 aa8.23□□□□□ -1.09
GPC6-202ENST00000617456 ACVR1Q04771 509 aa8.23□□□□□ -1.09
GPC6-202ENST00000617456 CACNG1Q06432 222 aa8.23□□□□□ -1.09
GPC6-202ENST00000617456 CDH17Q12864 832 aa8.23□□□□□ -1.09
GPC6-202ENST00000617456 PRKAA1Q13131 559 aa8.23□□□□□ -1.09
GPC6-202ENST00000617456 KRT33BQ14525 404 aa8.23□□□□□ -1.09
GPC6-202ENST00000617456 HIF1AQ16665 826 aa8.23□□□□□ -1.09
GPC6-202ENST00000617456 CRB2Q5IJ48 1285 aa8.23□□□□□ -1.09
GPC6-202ENST00000617456 C1orf189Q5VU69 101 aa8.23□□□□□ -1.09
GPC6-202ENST00000617456 DRICH1Q6PGQ1 229 aaPredicted RBP8.23□□□□□ -1.09
GPC6-202ENST00000617456 ZNF600Q6ZNG1 722 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms