RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 ASPDHA6ND91 283 aa14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 A8MV72 311 aaPredicted RBP14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 FXYD1O00168 92 aa14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 TAF4O00268 1085 aa14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 LATO43561 262 aa14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 ENO2P09104 434 aaPredicted RBP14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 ELFN1P0C7U0 828 aa14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 THRBP10828 461 aa14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 HNF4AP41235 474 aa14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 SUOXP51687 545 aa14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 ERVK-8P63133 956 aa14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 ADARB1P78563 741 aaKnown RBP14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 IFITM2Q01629 132 aa14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 GTF2IRD2BQ6EKJ0 949 aa14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 CERS6Q6ZMG9 384 aa14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 GTF2IRD2Q86UP8 949 aa14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 MMAAQ8IVH4 418 aaKnown RBP14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 SYTL1Q8IYJ3 562 aa14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 CFAP206Q8IYR0 622 aa14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 ZBTB18Q99592 522 aa14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 TRIT1Q9H3H1 467 aaKnown RBP14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 TRBV23OR9-2A0A075B6M9 112 aa14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 A0A1W2PP18 115 aa14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 TSPAN6O43657 245 aa14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 HOXB8P17481 243 aaPredicted RBP14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 CRHBPP24387 322 aa14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 NSG1P42857 185 aa14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 ARPC4P59998 168 aa14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 SLC16A12Q6ZSM3 486 aa14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 MAGED4Q96JG8 741 aa14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 VAPAQ9P0L0 249 aa14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 DLGAP4Q9Y2H0 992 aa14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 CABIN1Q9Y6J0 2220 aa14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 K7ESM1 405 aa14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 NDUFS2O75306 463 aa14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 PDYNP01213 254 aa14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 IRF8Q02556 426 aa14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 CHIT1Q13231 466 aa14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 XKR6Q5GH73 641 aa14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 CES5AQ6NT32 575 aa14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 USP43Q70EL4 1123 aa14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 C12orf40Q86WS4 652 aa14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 FATE1Q969F0 183 aa14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 AP2M1Q96CW1 435 aa14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 ASB2Q96Q27 587 aa14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 BDH2Q9BUT1 245 aa14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 MCOLN1Q9GZU1 580 aa14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 AKIP1Q9NQ31 210 aa14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 AIG1Q9NVV5 245 aa14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 SAGE1Q9NXZ1 904 aa14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 INVSQ9Y283 1065 aa14.04□□□□□ -0.16
SHROOM1-208ENST00000617339 TRIM64A6NGJ6 449 aa14.03□□□□□ -0.16
SHROOM1-208ENST00000617339 C16orf96A6NNT2 1141 aa14.03□□□□□ -0.16
SHROOM1-208ENST00000617339 MMP20O60882 483 aa14.03□□□□□ -0.16
SHROOM1-208ENST00000617339 C1SP09871 688 aa14.03□□□□□ -0.16
SHROOM1-208ENST00000617339 ARSFP54793 590 aa14.03□□□□□ -0.16
SHROOM1-208ENST00000617339 COLEC12Q5KU26 742 aa14.03□□□□□ -0.16
SHROOM1-208ENST00000617339 C9orf50Q5SZB4 431 aa14.03□□□□□ -0.16
SHROOM1-208ENST00000617339 LCN8Q6JVE9 175 aa14.03□□□□□ -0.16
SHROOM1-208ENST00000617339 TXNDC11Q6PKC3 985 aa14.03□□□□□ -0.16
SHROOM1-208ENST00000617339 TMEM220Q6QAJ8 160 aa14.03□□□□□ -0.16
SHROOM1-208ENST00000617339 MRPL43Q8N983 215 aaKnown RBP14.03□□□□□ -0.16
SHROOM1-208ENST00000617339 CD244Q9BZW8 370 aa14.03□□□□□ -0.16
SHROOM1-208ENST00000617339 CLDND1Q9NY35 253 aa14.03□□□□□ -0.16
SHROOM1-208ENST00000617339 EIF3LQ9Y262 564 aaKnown RBP14.03□□□□□ -0.16
SHROOM1-208ENST00000617339 PCDHB1Q9Y5F3 818 aa14.03□□□□□ -0.16
SHROOM1-208ENST00000617339 PATJQ8NI35 1801 aa14.03□□□□□ -0.16
SHROOM1-208ENST00000617339 ZNF682O95780 498 aa14.03□□□□□ -0.16
SHROOM1-208ENST00000617339 FCGR1AP12314 374 aa14.03□□□□□ -0.16
SHROOM1-208ENST00000617339 GTF2E2P29084 291 aaKnown RBP14.03□□□□□ -0.16
SHROOM1-208ENST00000617339 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.03□□□□□ -0.16
SHROOM1-208ENST00000617339 SPATC1Q76KD6 591 aa14.03□□□□□ -0.16
SHROOM1-208ENST00000617339 GATAD2AQ86YP4 633 aa14.03□□□□□ -0.16
SHROOM1-208ENST00000617339 FAM86B1Q8N7N1 296 aa14.03□□□□□ -0.16
SHROOM1-208ENST00000617339 CNIH3Q8TBE1 160 aa14.03□□□□□ -0.16
SHROOM1-208ENST00000617339 RPL3LQ92901 407 aaKnown RBP14.03□□□□□ -0.16
SHROOM1-208ENST00000617339 PEX13Q92968 403 aa14.03□□□□□ -0.16
SHROOM1-208ENST00000617339 ROPN1LQ96C74 230 aa14.03□□□□□ -0.16
SHROOM1-208ENST00000617339 RHBDF1Q96CC6 855 aa14.03□□□□□ -0.16
SHROOM1-208ENST00000617339 OR2AG1Q9H205 316 aa14.03□□□□□ -0.16
SHROOM1-208ENST00000617339 IKZF5Q9H5V7 419 aa14.03□□□□□ -0.16
SHROOM1-208ENST00000617339 LRTM1Q9HBL6 345 aa14.03□□□□□ -0.16
SHROOM1-208ENST00000617339 MRGBPQ9NV56 204 aa14.03□□□□□ -0.16
SHROOM1-208ENST00000617339 NUDT4Q9NZJ9 180 aa14.03□□□□□ -0.16
SHROOM1-208ENST00000617339 TBC1D14Q9P2M4 693 aa14.03□□□□□ -0.16
SHROOM1-208ENST00000617339 BOLA1Q9Y3E2 137 aa14.03□□□□□ -0.16
SHROOM1-208ENST00000617339 EIF3FO00303 357 aaPredicted RBP14.03□□□□□ -0.16
SHROOM1-208ENST00000617339 ZNF197O14709 1029 aa14.03□□□□□ -0.16
SHROOM1-208ENST00000617339 PIGAP37287 484 aa14.03□□□□□ -0.16
SHROOM1-208ENST00000617339 SPINT3P49223 89 aa14.03□□□□□ -0.16
SHROOM1-208ENST00000617339 CREMQ03060 361 aa14.03□□□□□ -0.16
SHROOM1-208ENST00000617339 BNIP2Q12982 314 aa14.03□□□□□ -0.16
SHROOM1-208ENST00000617339 GTF2H3Q13889 308 aa14.03□□□□□ -0.16
SHROOM1-208ENST00000617339 DPY19L1Q2PZI1 675 aa14.03□□□□□ -0.16
SHROOM1-208ENST00000617339 ADPRMQ3LIE5 342 aa14.03□□□□□ -0.16
SHROOM1-208ENST00000617339 ZNF621Q6ZSS3 439 aa14.03□□□□□ -0.16
SHROOM1-208ENST00000617339 ARMC8Q8IUR7 673 aa14.03□□□□□ -0.16
SHROOM1-208ENST00000617339 TMEM159Q96B96 161 aa14.03□□□□□ -0.16
SHROOM1-208ENST00000617339 ZNF486Q96H40 463 aaPredicted RBP14.03□□□□□ -0.16
SHROOM1-208ENST00000617339 CGREF1Q99674 301 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms