RNA–Protein interactions for RNA: ENST00000616236.1

RFC3-203, Transcript of replication factor C subunit 3, humanhuman

TSL 3

Gene RFC3, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-203ENST00000616236 ENTPD4Q9Y227 616 aa4.73□□□□□ -1.65
RFC3-203ENST00000616236 TRIM49BA6NDI0 452 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 C17orf105B2RV13 164 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 ANKRD66B4E2M5 251 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 GAPDHSO14556 408 aaPredicted RBP4.72□□□□□ -1.65
RFC3-203ENST00000616236 SLC22A2O15244 555 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 CHADO15335 359 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 NARSO43776 548 aaKnown RBP4.72□□□□□ -1.65
RFC3-203ENST00000616236 LANCL1O43813 399 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 CYTIPO60759 359 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 TSC22D2O75157 780 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 CNOT3O75175 753 aaKnown RBP4.72□□□□□ -1.65
RFC3-203ENST00000616236 BCAR3O75815 825 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 IDH1O75874 414 aaKnown RBP4.72□□□□□ -1.65
RFC3-203ENST00000616236 OR6A2O95222 327 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 EPB41P11171 864 aaKnown RBP4.72□□□□□ -1.65
RFC3-203ENST00000616236 GOT1P17174 413 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 HOXA5P20719 270 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 S1PR1P21453 382 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 MPGP29372 298 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 MARCKSP29966 332 aaPredicted RBP4.72□□□□□ -1.65
RFC3-203ENST00000616236 SSTR2P30874 369 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 PEX19P40855 299 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 PTH2RP49190 550 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 DHPSP49366 369 aaPredicted RBP4.72□□□□□ -1.65
RFC3-203ENST00000616236 METAP1P53582 386 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 CX3CL1P78423 397 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 ROR2Q01974 943 aaKnown RBP4.72□□□□□ -1.65
RFC3-203ENST00000616236 EEF1A2Q05639 463 aaKnown RBP4.72□□□□□ -1.65
RFC3-203ENST00000616236 MBTD1Q05BQ5 628 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 FOXF2Q12947 444 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 KRT31Q15323 416 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 CCDC142Q17RM4 750 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 SHROOM1Q2M3G4 852 aaPredicted RBP4.72□□□□□ -1.65
RFC3-203ENST00000616236 USH1GQ495M9 461 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 NADK2Q4G0N4 442 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 ATAD3BQ5T9A4 648 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 CYP4A22Q5TCH4 519 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 ZNF627Q7L945 461 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 GLCCI1Q86VQ1 547 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 NUDT13Q86X67 352 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 LGI2Q8N0V4 545 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 CRYBG2Q8N1P7 616 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 SMYD1Q8NB12 490 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 SIDT2Q8NBJ9 832 aaKnown RBP4.72□□□□□ -1.65
RFC3-203ENST00000616236 FAM71CQ8NEG0 241 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 OR11H4Q8NGC9 324 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 RNF139Q8WU17 664 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 CTNNBL1Q8WYA6 563 aaPredicted RBP4.72□□□□□ -1.65
RFC3-203ENST00000616236 LARP4BQ92615 738 aaKnown RBP4.72□□□□□ -1.65
RFC3-203ENST00000616236 LPAR1Q92633 364 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 FCGR1BQ92637 280 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 URB1-AS1Q96HZ7 61 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 TTC25Q96NG3 672 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 TAAR6Q96RI8 345 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 NDNQ99608 321 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 PRRX2Q99811 253 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 PRMT1Q99873 361 aaKnown RBP4.72□□□□□ -1.65
RFC3-203ENST00000616236 PUS3Q9BZE2 481 aaKnown RBP4.72□□□□□ -1.65
RFC3-203ENST00000616236 TMEM117Q9H0C3 514 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 ARRDC1-AS1Q9H2J1 176 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 RIMS4Q9H426 269 aaPredicted RBP4.72□□□□□ -1.65
RFC3-203ENST00000616236 DPEP3Q9H4B8 488 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 ACTL8Q9H568 366 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 RMND5AQ9H871 391 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 ROPN1Q9HAT0 212 aaPredicted RBP4.72□□□□□ -1.65
RFC3-203ENST00000616236 COPS7AQ9UBW8 275 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 IL20RAQ9UHF4 553 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 PACSIN3Q9UKS6 424 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 MFHAS1Q9Y4C4 1052 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 ASB3Q9Y575 518 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 PCDHAC2Q9Y5I4 1007 aa4.72□□□□□ -1.65
RFC3-203ENST00000616236 TRAV18A0A075B6X5 111 aa4.71□□□□□ -1.66
RFC3-203ENST00000616236 PRR32B1ATL7 298 aa4.71□□□□□ -1.66
RFC3-203ENST00000616236 NPIPA3F8WFD2 350 aa4.71□□□□□ -1.66
RFC3-203ENST00000616236 ADAM12O43184 909 aa4.71□□□□□ -1.66
RFC3-203ENST00000616236 BUD23O43709 281 aaKnown RBP4.71□□□□□ -1.66
RFC3-203ENST00000616236 SCO2O43819 266 aa4.71□□□□□ -1.66
RFC3-203ENST00000616236 LDB3O75112 727 aa4.71□□□□□ -1.66
RFC3-203ENST00000616236 MTX2O75431 263 aa4.71□□□□□ -1.66
RFC3-203ENST00000616236 STBD1O95210 358 aa4.71□□□□□ -1.66
RFC3-203ENST00000616236 LATS1O95835 1130 aa4.71□□□□□ -1.66
RFC3-203ENST00000616236 ZCCHC18P0CG32 403 aa4.71□□□□□ -1.66
RFC3-203ENST00000616236 SFTPCP11686 197 aa4.71□□□□□ -1.66
RFC3-203ENST00000616236 B4GALT1P15291 398 aa4.71□□□□□ -1.66
RFC3-203ENST00000616236 CSF2RAP15509 400 aa4.71□□□□□ -1.66
RFC3-203ENST00000616236 CKMT2P17540 419 aa4.71□□□□□ -1.66
RFC3-203ENST00000616236 DGKAP23743 735 aa4.71□□□□□ -1.66
RFC3-203ENST00000616236 NR0B1P51843 470 aaKnown RBP4.71□□□□□ -1.66
RFC3-203ENST00000616236 ISL1P61371 349 aa4.71□□□□□ -1.66
RFC3-203ENST00000616236 IL24Q13007 206 aa4.71□□□□□ -1.66
RFC3-203ENST00000616236 SNTB2Q13425 540 aaKnown RBP4.71□□□□□ -1.66
RFC3-203ENST00000616236 KIF19Q2TAC6 998 aa4.71□□□□□ -1.66
RFC3-203ENST00000616236 TMEM35AQ53FP2 167 aa4.71□□□□□ -1.66
RFC3-203ENST00000616236 FSCBQ5H9T9 825 aa4.71□□□□□ -1.66
RFC3-203ENST00000616236 SPDYCQ5MJ68 293 aa4.71□□□□□ -1.66
RFC3-203ENST00000616236 NDUFAF5Q5TEU4 345 aa4.71□□□□□ -1.66
RFC3-203ENST00000616236 KLHL10Q6JEL2 608 aa4.71□□□□□ -1.66
RFC3-203ENST00000616236 TTC27Q6P3X3 843 aa4.71□□□□□ -1.66
RFC3-203ENST00000616236 FUT10Q6P4F1 479 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms